KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:34:48 2014 Check: 00 .. Name: ENSTTRP00000004295/1-835 Len: 857 Check: 7374 Weight: 1.00 Name: bmy_18306T0/1-790 Len: 857 Check: 8320 Weight: 1.00 Name: BACU007668/1-797 Len: 857 Check: 3877 Weight: 1.00 Name: ENSP00000335153/1-854 Len: 857 Check: 5990 Weight: 1.00 Name: ENSBTAP00000008225/1-733 Len: 857 Check: 4280 Weight: 1.00 // 1 50 ENSTTRP00000004295/1-835 ---------- VPPSPGEGRS PCSGVSPRTP HSRLDPGSGN PCASPSHFPR bmy_18306T0/1-790 ---------- ---------- ---------- ---------- ---------- BACU007668/1-797 ---------- ---------- ---------- ---------- ---------- ENSP00000335153/1-854 MPPCSGGDGS TPPGPSLRDR DCPAQSAEYP RDRLDPRPGS PSEASSPPFL ENSBTAP00000008225/1-733 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000004295/1-835 SGVLVHLDPK EAEVPPGCRA VSGSAAQSVC LWEHTPVPPS GSP------- bmy_18306T0/1-790 RGGGWGGFFR KVREASGKGA ---------A RWAGTPLYKG GAGTARQLLL BACU007668/1-797 -GVLVHSDPK EDEVPPGCRA ---------C VWIRRPVCLS LGAHPRPTLW ENSP00000335153/1-854 RSRAPVNWYQ EKAQVFLWHL MVSGSTTLLC LW-KQPFHVS AFPVTASLAF ENSBTAP00000008225/1-733 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000004295/1-835 ----GSHGTV RSREQPRVLL VVFRMPEETQ TQDQPMEEEE VETFAFQAEI bmy_18306T0/1-790 RSGAASLRSL CGPLAE---- ----MPEETQ TQDQPMEEEE VETFAFQAEI BACU007668/1-797 VTRLPRERAP PQGSQPRVLF VLFRMPEETQ TQDQPMEEEE VETFAFQAEI ENSP00000335153/1-854 RQSQGAGQHL YKDLQPFILL RLL-MPEETQ TQDQPMEEEE VETFAFQAEI ENSBTAP00000008225/1-733 ---------- ---------- ----MPEETQ AQDQPMEEEE VETFAFQAEI 151 200 ENSTTRP00000004295/1-835 AQLMSLIINT FYSNKEIFLR ELISNSSDAL DKIRYESLTD PSKLDSGKEL bmy_18306T0/1-790 AQLMSLIINT FYSNKEIFLR ELISNSSDAL DKIRYESLTD PSKLDSGKEL BACU007668/1-797 AQLMSLIINT FYSNKEIFLR ELISNSSDAL DKIRYESLTD PSKLDSGKEL ENSP00000335153/1-854 AQLMSLIINT FYSNKEIFLR ELISNSSDAL DKIRYESLTD PSKLDSGKEL ENSBTAP00000008225/1-733 AQLMSLIINT FYSNKEIFLR ELISNSSDAL DKIRYESLTD PSKLDSGKEL 201 250 ENSTTRP00000004295/1-835 HINLIPNKQD RTLTIVDTGI GMTKANLINN LGXXXXXXXX XXXXXXXXXX bmy_18306T0/1-790 HINLIPNKHD RTLTIVDTGI GMTKADLINN LGTIAKSGTK AFMEALQAGA BACU007668/1-797 HINLIPNKHD RTLTIVDTGI GMTKADLINN LGTIAKSGTK AFMEALQAGA ENSP00000335153/1-854 HINLIPNKQD RTLTIVDTGI GMTKADLINN LGTIAKSGTK AFMEALQAGA ENSBTAP00000008225/1-733 HINLIPNKQD RTLTIVDTGI GMTKADLINN LGTIAKSGTK AFMEALQAGA 251 300 ENSTTRP00000004295/1-835 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_18306T0/1-790 DISMIGQFGV GFYSAYLVAE KVTVITKHND DEQYAWESSA GGSFTVRTDT BACU007668/1-797 DISMIGQFGV GFYSAYLVAE KVTVITKHND DEQYAWESSA GGSFTVRTDT ENSP00000335153/1-854 DISMIGQFGV GFYSAYLVAE KVTVITKHND DEQYAWESSA GGSFTVRTDT ENSBTAP00000008225/1-733 DISMIGQFGV GFYSAYLVAE KVTVITKHND DEQYAWESSA GGSFTVRTDT 301 350 ENSTTRP00000004295/1-835 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_18306T0/1-790 GEPMGRGTKV ILHLKEDQTE YLEERRIKEI VKKHSQFIGY PITLFVEKER BACU007668/1-797 GEPMGRGTKV ILHLKEDQTE YLEERRIKEI VKKHSQFIGY PITLFVEKER ENSP00000335153/1-854 GEPMGRGTKV ILHLKEDQTE YLEERRIKEI VKKHSQFIGY PITLFVEKER ENSBTAP00000008225/1-733 GEPMGRGTKV ILHLKEDQTE YLEERRIKEI VKKHSQFIGY PITLFVEKER 351 400 ENSTTRP00000004295/1-835 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_18306T0/1-790 DKEVSDDEAE EKEDKEEEKE KEEKESEDKP EIEDVGSDEE EEEKKDGDKK BACU007668/1-797 DKEVSDDEAE EKEDKEEEKE KEEKESEDKP EIEDVGSDEE EEEKKDGDKK ENSP00000335153/1-854 DKEVSDDEAE EKEDKEEEKE KEEKESEDKP EIEDVGSD-E EEEKKDGDKK ENSBTAP00000008225/1-733 DKEVSDDEAE EKEDKEEEKE KEEKESDDKP EIEDVGSDEE EEEKKDGDKK 401 450 ENSTTRP00000004295/1-835 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXX-XXXXXX bmy_18306T0/1-790 KKKKIKEKYI DQEELNKTKP IWTRNPDDIS NEEYGEFYKS LTNDWEDHLA BACU007668/1-797 KKKKIKEKYI DQEELNKTKP IWTRNPDDIS NEEYGEFYKS LTNDWEDHLA ENSP00000335153/1-854 KKKKIKEKYI DQEELNKTKP IWTRNPDDIT NEEYGEFYKS LTNDWEDHLA ENSBTAP00000008225/1-733 KKKKIKEKYI DQEELNKTKP IWTRNPDDIT NEEYGEFYKS LTNDWEDHLA 451 500 ENSTTRP00000004295/1-835 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_18306T0/1-790 VKHFSVEGQL EFRALLFVPR RAPFDLFENR KKKNNIKLYV RRVFIMDNCE BACU007668/1-797 VKHFSVEGQL EFRALLFVPR RAPFDLFENR KKKNNIKLYV RRVFIMDNCE ENSP00000335153/1-854 VKHFSVEGQL EFRALLFVPR RAPFDLFENR KKKNNIKLYV RRVFIMDNCE ENSBTAP00000008225/1-733 VKHFSVEGQL EFRALLFVPR RAPFDLFENR KKKNNIKLYV RRVFIMDNCE 501 550 ENSTTRP00000004295/1-835 XXXXXXXXXX XXXXXXXDLP LNIAREMLQQ SKILKVIRKN LVKKCLELFT bmy_18306T0/1-790 ELIPEYLNFI RGVVDSEDLP LNISREMLQQ SKILKVIRKN LVKKCLELFT BACU007668/1-797 ELIPEYLNFI RGVVDSEDLP LNISREMLQQ SKILKVIRKN LVKKCLELFT ENSP00000335153/1-854 ELIPEYLNFI RGVVDSEDLP LNISREMLQQ SKILKVIRKN LVKKCLELFT ENSBTAP00000008225/1-733 ELIPEYLNFI RGVVDSEDLP LNISREMLQQ SKILKVIRKN LVKKCLELFT 551 600 ENSTTRP00000004295/1-835 ELAEDKENYK KFYEQFSNNI KLGIHEDSQN RKKLSELLRY YTSASGDEMV bmy_18306T0/1-790 ELAEDKENYK KFYEQFSKNI KLGIHEDSQN RKKLSELLRY YTSASGDEMV BACU007668/1-797 ELAEDKENYK KFYEQFSKNI KLGIHEDSQN RKKLSELLRY YTSASGDEMV ENSP00000335153/1-854 ELAEDKENYK KFYEQFSKNI KLGIHEDSQN RKKLSELLRY YTSASGDEMV ENSBTAP00000008225/1-733 ELAEDKENYK KFYEQFSKNI KLGIHEDSQN RKKLSELLRY YTSASGDEMV 601 650 ENSTTRP00000004295/1-835 SLKDYCTRMK ENQKHIYYIT GETKDQVANS AFVERLRKHG LEVIYMIEPI bmy_18306T0/1-790 SLKDYCTRMK ENQKHIYYIT GETKDQVANS AFVERLRKHG LEVIYMIEPI BACU007668/1-797 SLKDYCTRMK ENQKHIYYIT GETKDQVANS AFVERLRKHG LEVIYMIEPI ENSP00000335153/1-854 SLKDYCTRMK ENQKHIYYIT GETKDQVANS AFVERLRKHG LEVIYMIEPI ENSBTAP00000008225/1-733 SLKDYCTRMK ENQKHIYYIT GETKDQVANS AFVERLRKHG LEVIYMIEPI 651 700 ENSTTRP00000004295/1-835 DEYCVQQLKE FEGKTLVSVT KEGLELPEDE EEKKKQEEKK TKFENLCKIM bmy_18306T0/1-790 DEYCVQQLKE FEGKTLVSVT KEGLELPEDE EEKKKQEEKK TKFENLCKIM BACU007668/1-797 DEYCVQQLKE FEGKTLVSVT KEGLELPEDE EEKKKQEEKK TKFENLCKIM ENSP00000335153/1-854 DEYCVQQLKE FEGKTLVSVT KEGLELPEDE EEKKKQEEKK TKFENLCKIM ENSBTAP00000008225/1-733 DEYCVQQLKE FEGKTLVSVT KEGLELPEDE EEKKKQEEKK TKFENLCKIM 701 750 ENSTTRP00000004295/1-835 KDILEKKVEK VVVSNRLVTS PCCIVTSTYG WTANMERIMK AQALRDNSTM bmy_18306T0/1-790 KDILEKKVEK VVVSNRLVTS PCCIVTSTYG WTANMERIMK AQALRDNSTM BACU007668/1-797 KDILEKKVEK VVVSNRLVTS PCCIVTSTYG WTANMERIMK AQALRDNSTM ENSP00000335153/1-854 KDILEKKVEK VVVSNRLVTS PCCIVTSTYG WTANMERIMK AQALRDNSTM ENSBTAP00000008225/1-733 KDILEKKVEK VVVSNRLVTS PCCIVTSTYG WTANMERIMK AQALRDNSTM 751 800 ENSTTRP00000004295/1-835 GYMAAKKHLE INPDHSIIET LRQKAEADKN DKSVKDLVIL LYETALLSSG bmy_18306T0/1-790 GYMAAKKHLE INPDHSIIET LRQKAEADKN DKSVKDLVIL LYETALLSSG BACU007668/1-797 GYMAAKKHLE INPDHSIIET LRQKAEADKN DKSVKDLVIL LYETALLSSG ENSP00000335153/1-854 GYMAAKKHLE INPDHSIIET LRQKAEADKN DKSVKDLVIL LYETALLSSG ENSBTAP00000008225/1-733 GYMAAKKHLE INPDHSIIET LRQKAEADKN DKSVKDLVIL LYETALLSSG 801 850 ENSTTRP00000004295/1-835 FSLEDPQTHA NRIYRMIKLG LGIDEDDPTA DDSSAAVTEE MPPLEGDDDT bmy_18306T0/1-790 FSLEDPQTHA NRIYRMIKLG LGIDEDDPTA DDSSAAVTEE MPPLEGDDDT BACU007668/1-797 FSLEDPQTHA NRIYRMIKLG LGIDEDDPTA DDSSAAVTEE MPPLEGDDDT ENSP00000335153/1-854 FSLEDPQTHA NRIYRMIKLG LGIDEDDPTA DDTSAAVTEE MPPLEGDDDT ENSBTAP00000008225/1-733 FSLEDPQTHA NRIYRMIKLG LGIDEDDPTA DDSSAAVTEE MPPLEGDDDT 851 900 ENSTTRP00000004295/1-835 SRMEEVD bmy_18306T0/1-790 SRMEEVD BACU007668/1-797 SRMEEVD ENSP00000335153/1-854 SRMEEVD ENSBTAP00000008225/1-733 SRMEEVD