KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:34:50 2014 Check: 00 .. Name: BACU001643/1-114 Len: 286 Check: 4825 Weight: 1.00 Name: ENSTTRP00000016424/1-259 Len: 286 Check: 2546 Weight: 1.00 Name: ENSP00000244763/1-286 Len: 286 Check: 6234 Weight: 1.00 Name: bmy_00862T0/1-286 Len: 286 Check: 7628 Weight: 1.00 Name: ENSBTAP00000008253/1-286 Len: 286 Check: 6614 Weight: 1.00 // 1 50 BACU001643/1-114 MKSLPRLLLL LLQ-FPASLL LRGDPGGSLA AARDLTEDEE TVEDSINEDE ENSTTRP00000016424/1-259 ---------- ---------- -------SLA AAQDLTEDEE TVEDSVIEDE ENSP00000244763/1-286 MRLLPRLLLL LLLVFPATVL FRGGPRGLLA VAQDLTEDEE TVEDSIIEDE bmy_00862T0/1-286 MKSLPRLLLL LLLVFPATLL LRGRPGGSLA AAQDLTEDEE TVEDSVIEDX ENSBTAP00000008253/1-286 MSSLRRLLLL LLLVFPATLL LRVGPGGSLA VAQDLTEDEE TVEDSIIEDE 51 100 BACU001643/1-114 DDEAEVEDDE PTYLAEDKEE EDVSGEPEAS PSADTTILFV KGE-FPADNI ENSTTRP00000016424/1-259 DDEAEVEEDE PTDLVKDKEE EDVSGEPEAS PSADTTILFV KGEDFPANNI ENSP00000244763/1-286 DDEAEVEEDE PTDLVEDKEE EDVSGEPEAS PSADTTILFV KGEDFPANNI bmy_00862T0/1-286 DDEAEVEEDE PTDLAEDKEE EDVSGEPEAS PSADTTILFV KGEDFPANNI ENSBTAP00000008253/1-286 DDEAEVEEDE PTDLAEDKEE DDVSGEPEAS PSADTTILFV KGEDFPANNI 101 150 BACU001643/1-114 VKFLVGFTDQ ---------- ---------- ---------- ---------- ENSTTRP00000016424/1-259 VKFLVGFTNK GTEDFVVESL DASFRYPQDY QFYIQNFTAL PLNTVVPPQR ENSP00000244763/1-286 VKFLVGFTNK GTEDFIVESL DASFRYPQDY QFYIQNFTAL PLNTVVPPQR bmy_00862T0/1-286 VKFLVGFTNK GTEDFIVESL DASFRYPQDY QFYIQNFTAL PLNTVVPPQR ENSBTAP00000008253/1-286 VKFLVGFTNK GTEDFIVESL DASFRYPQDY QFYIQNFTAL PLNTVVPPQR 151 200 BACU001643/1-114 ---------- ---------I LLLNL----- ---------- ---------- ENSTTRP00000016424/1-259 QATFEYSFIP AEPMGGRPFG LVINLNYKDL NGNVFQDAVF NQTVTVIERE ENSP00000244763/1-286 QATFEYSFIP AEPMGGRPFG LVINLNYKDL NGNVFQDAVF NQTVTVIERE bmy_00862T0/1-286 QATFEYSFIP AEPMGGRPFG LVINLNYKDL NGNVFQDAVF NQTVTIIERE ENSBTAP00000008253/1-286 QATFEYSFIP AEPMGGRPFG LVINLNYKDL NGNVFQDAVF NQTVTIIERE 201 250 BACU001643/1-114 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016424/1-259 DGLDGETXXX XXXXXXXXXX XXXXXXXXXX XXXRKRPIQK VETGTSSQSD ENSP00000244763/1-286 DGLDGETIFM YMFLAGLGLL VIVGLHQLLE SRKRKRPIQK VEMGTSSQND bmy_00862T0/1-286 DGLDGETIFM YMFLAGLGLL VVVGLHQLLE SRKRKRPIQK VETGTSSQSD ENSBTAP00000008253/1-286 DGLDGETIFM YMFLAGLGLL VVVGLHQLLE SRKRKRPIQK VEMGTSSQND 251 300 BACU001643/1-114 ---------- ---------- ---------- ------ ENSTTRP00000016424/1-259 VDMSWIPQET LNQINKASPR RLPRKRAQKR SVGSDE ENSP00000244763/1-286 VDMSWIPQET LNQINKASPR RLPRKRAQKR SVGSDE bmy_00862T0/1-286 VDMSWIPQET LNQINKASPR RLPRKRAQKR SVGSDE ENSBTAP00000008253/1-286 VDMSWIPQET LNQINKASPR RLPRKRAQKR SVGSDE