KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:34:51 2014 Check: 00 .. Name: bmy_16166T0/1-379 Len: 508 Check: 9714 Weight: 1.00 Name: ENSP00000359151/1-482 Len: 508 Check: 7891 Weight: 1.00 Name: BACU002777/1-286 Len: 508 Check: 8458 Weight: 1.00 Name: ENSBTAP00000008292/1-482 Len: 508 Check: 5387 Weight: 1.00 Name: ENSTTRP00000014520/1-482 Len: 508 Check: 6685 Weight: 1.00 // 1 50 bmy_16166T0/1-379 ---------- ---------- ---------- ---------- ---------- ENSP00000359151/1-482 MAAVRMLRTW SRNAGKLICV RYFQTCGNVH VLKPNYVCFF GYPSFKYSHP BACU002777/1-286 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008292/1-482 MAAALVLRTW SRAAGQLICV RYFQTCGNVH VLKPKYVCFF GYPPFKYSHP ENSTTRP00000014520/1-482 MAAACVLRTW SRTAGRLSCV RYFQTCGNTH VLKPNYVSFF GYPSFKYNHP 51 100 bmy_16166T0/1-379 ---------L QGQIVQFKLS DIGEGIREVT VKECNKASKS LWKSLYVKEG ENSP00000359151/1-482 HHFLKTTAAL RGQVVQFKLS DIGEGIREVT VKE------- ----WYVKEG BACU002777/1-286 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008292/1-482 YQWLKTTAAL QGQIVQFKLS DIGEGIREVT VKE------- ----WYVKEG ENSTTRP00000014520/1-482 HQLLKTTAAL QGQIVQFKLS DIGEGIREVT VKE------- ----WYVKEG 101 150 bmy_16166T0/1-379 DTVSQFDSIC EVQSDKASVT ITSRYDGVIK KLYYNLDDIA YVGKPLVDIE ENSP00000359151/1-482 DTVSQFDSIC EVQSDKASVT ITSRYDGVIK KLYYNLDDIA YVGKPLVDIE BACU002777/1-286 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008292/1-482 DTVSQFDSIC EVQSDKASVT ITSRYDGVIK KLYYNLDDTA YVGKPLVDIE ENSTTRP00000014520/1-482 DTVSQFDSIC EVQSDKASVT ITSRYDGVIK KLYYNLDDIA YVGKPLVDIE 151 200 bmy_16166T0/1-379 TEALKDSEED VVETPAVSHD EHTHQEIKGQ KTLATPAVRR LAMENNIKLS ENSP00000359151/1-482 TEALKDSEED VVETPAVSHD EHTHQEIKGR KTLATPAVRR LAMENNIKLS BACU002777/1-286 ---------- ---------- ---------- ---------- ------IKLS ENSBTAP00000008292/1-482 TEALKDSEED VVETPAVSHD EHTHQEIKGQ KTLATPAVRR LAMENNIKLS ENSTTRP00000014520/1-482 TEALKDSEED VVETPAVSHD EHTHQEIKGQ KTLATPAVRR LAMENNIKLS 201 250 bmy_16166T0/1-379 EVVGSGKDGR ILKEDILSYL EKQTGAILPP SPKAEIMPPP PKPKDRTIPI ENSP00000359151/1-482 EVVGSGKDGR ILKEDILNYL EKQTGAILPP SPKVEIMPPP PKPKDMTVPI BACU002777/1-286 EVVGSGKDGR ILKEDILSYL EKQTGAILPP SPKAEIMPPP PKPKDRTIPI ENSBTAP00000008292/1-482 EVIGSGKDGR ILKEDILNYL EKQTGAILPP SPKAEIMPPP PKPKDRTIPI ENSTTRP00000014520/1-482 EVVGSGKDGR ILKEDILSYL EKQTGAILPP SPKAEIMPPP PKPKERTIPI 251 300 bmy_16166T0/1-379 PISKPPVFTG KDRTEPIKGN NNSNV----- ---------- ----RMINFQ ENSP00000359151/1-482 LVSKPPVFTG KDKTEPIKGF QKAMV----- ---------- KTMSAALKIP BACU002777/1-286 PISKPPVFTG KDRTEPIKVN ASALKLLAFK LCNEDGSSKR KSLIKTLNIP ENSBTAP00000008292/1-482 PISKPPVFIG KDRTEPVKGF HKAMV----- ---------- KTMSAALKIP ENSTTRP00000014520/1-482 PISKPPVFTG KDRTEPIKGF HKAMV----- ---------- KTMSAALKIP 301 350 bmy_16166T0/1-379 KSGFARS--- ---HCLREEL KPIAFARGIK LSFMPFFLKA ASLGLLQFPI ENSP00000359151/1-482 HFGYCDEIDL TELVKLREEL KPIAFARGIK LSFMPFFLKA ASLGLLQFPI BACU002777/1-286 HFGYCDEVDL TELVKLREEL KPIAFARGIK LSFMPFFLKA ---------- ENSBTAP00000008292/1-482 HFGYCDEVDL TELVKLREEL KPIAFARGIK LSFMPFFLKA ASLGLLQFPI ENSTTRP00000014520/1-482 HFGYCDDVDL TELVKLREEL KPIAFARGIK LSFMPFFLKA ASLGLLQFPI 351 400 bmy_16166T0/1-379 LNASVDENCQ NITYK----- -----VKEAS IIP-----QV VIFFKLEIK- ENSP00000359151/1-482 LNASVDENCQ NITYKASHNI GIAMDTEQGL IVPNVKNVQI CSIFDIATEL BACU002777/1-286 ---------- ------SHNI GIAMDTEQGL IVPNVKNIQI RSIFEIATEL ENSBTAP00000008292/1-482 LNASVDENCQ NITYKASHNI GIAMDTEQGL IVPNVKNVQI RSIFEIATEL ENSTTRP00000014520/1-482 LNASVDENCQ NITYKASHNI GIAMDTEQGL IVPNVKNIQV RSIFEIATEL 401 450 bmy_16166T0/1-379 ---------- ---------- ---------I GGTYARPVIL PPEVAIGAVG ENSP00000359151/1-482 NRLQKLGSVS QLSTTDLTGG TFTLSNIGSI GGTFAKPVIM PPEVAIGALG BACU002777/1-286 NRLQKLGSAG QLSTTDLTGG TFTLSNIGSI GGTYARPVIL PPEVAIGAVG ENSBTAP00000008292/1-482 NRLQKLGSAG QLSTNDLIGG TFTLSNIGSI GGTYAKPVIL PPEVAIGALG ENSTTRP00000014520/1-482 NRLQKLGSAG QLSTTDLTGG TFTLSNIGSI GGTYARPVIL PPEVAIGALG 451 500 bmy_16166T0/1-379 TIKALPRFNE KGEVYKAQIM NVSWSADHRI IDGATMSRFS NLWKSYLENP ENSP00000359151/1-482 SIKAIPRFNQ KGEVYKAQIM NVSWSADHRV IDGATMSRFS NLWKSYLENP BACU002777/1-286 TIKALPRFNE KGEVYKAQIM NVSWSADHRI IDGATMSRFS NLWKSYLENP ENSBTAP00000008292/1-482 TIKALPRFNE KGEVCKAQIM NVSWSADHRI IDGATVSRFS NLWKSYLENP ENSTTRP00000014520/1-482 KIKALPRFNK KGEVYKAQIM NVSWSADHRI IDGATMSHFS NLWKSYLENP 501 550 bmy_16166T0/1-379 AFMLLDLK ENSP00000359151/1-482 AFMLLDLK BACU002777/1-286 AFMLLDLK ENSBTAP00000008292/1-482 AFMLLDLK ENSTTRP00000014520/1-482 AFMLLDLK