KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:34:52 2014 Check: 00 .. Name: ENSBTAP00000008295/1-525 Len: 528 Check: 3101 Weight: 1.00 Name: ENSP00000300131/1-525 Len: 528 Check: 3547 Weight: 1.00 Name: bmy_03894T0/1-528 Len: 528 Check: 7358 Weight: 1.00 Name: BACU020038/1-489 Len: 528 Check: 6193 Weight: 1.00 Name: ENSTTRP00000012393/1-488 Len: 528 Check: 3820 Weight: 1.00 // 1 50 ENSBTAP00000008295/1-525 MHRAASPTAE QPPGGGDSAR RTPQPRLKPS SRAMALPRTL GELQLYRVLQ ENSP00000300131/1-525 MHRAPSPTAE QPPGGGDSAR RTLQPRLKPS ARAMALPRTL GELQLYRVLQ bmy_03894T0/1-528 MHRAPSPTAE QPPGGGDSAR RTPQPRLKPS ARAMALPRTL GELQLYRVLQ BACU020038/1-489 MHRAPSPTAE QPPGGGDSAR RTPQPRLKPS ARAMALPRTL GELQLYRVLQ ENSTTRP00000012393/1-488 MHRAPSPTAE QPPGGGDSAR RTPQPRLKPS ARAMALPRTL GELQLYRVLQ 51 100 ENSBTAP00000008295/1-525 RANLLSYYET FIQQGGDDVQ QLCEAGEEEF LEIMALVGMA TKPLHVRRLQ ENSP00000300131/1-525 RANLLSYYET FIQQGGDDVQ QLCEAGEEEF LEIMALVGMA TKPLHVRRLQ bmy_03894T0/1-528 RANLLSYYET FIQQGGDDVQ QLCEAGEEEF LEIMALVGMA TKPLHVRRLQ BACU020038/1-489 RANLLSYYET FIQQGGDDVQ QLCEAGEEEF LEIMALVGMA TKPLHVRRLQ ENSTTRP00000012393/1-488 RANLLSYYET FIQQGGDDVQ QLCEAGEEEF LEIMALVGMA TKPLHVRRLQ 101 150 ENSBTAP00000008295/1-525 KALREWATNP GLFSQPVPAV PVSSIPLFKI SETAGTRKGS MSNGHGSPGE ENSP00000300131/1-525 KALREWATNP GLFSQPVPAV PVSSIPLFKI SETAGTRKGS MSNGHGSPGE bmy_03894T0/1-528 KALREWATNP GLFSQPVPAV PVSSIPLFKI SETAGTRKGS MSNGHGSPGE BACU020038/1-489 KALREWATNP GLFSQPVPAV PVSSIPLFKI SETAGTRKGS MSNGHGSPGE ENSTTRP00000012393/1-488 KALREWATNP GLFSQPVPAV PVSSIPLFKI SETAGTRKGS MSNGHGSPGE 151 200 ENSBTAP00000008295/1-525 KAGSARSFSP KSPLELGEKL SPLPGGPGAG DPRIWPGRST PESDVGAGGE ENSP00000300131/1-525 KAGSARSFSP KSPLELGEKL SPLPGGPGAG DPRIWPGRST PESDVGAGGE bmy_03894T0/1-528 KAGSARSFSP KSPLELGEKL SPLSGGPGAG DPRIWPGRST PESDVGAGGE BACU020038/1-489 KAGSARSFSP KSPLELGEKL SPLSGGPGAG DPRIWPGRST PESDVGAGGE ENSTTRP00000012393/1-488 KAGSARSFSP KSPLELGEKL SPLSGGPGAG DPRIWPGRST PESDVGAGGE 201 250 ENSBTAP00000008295/1-525 EEAGSPPFSP PAGGGGPEGT GAGGLAAAGT GGGPDRLEPE MVRMVVESVE ENSP00000300131/1-525 EEAGSPPFSP PAGGGVPEGT GAGGLAAGGT GGGPDRLEPE MVRMVVESVE bmy_03894T0/1-528 EEAGSPPFSP PAGGGVPEGT GAGGLAAAGA GGGPDRLEPE MVRMVVESVE BACU020038/1-489 EEAGSPPFSP PAGGGVPEGT GAGGLAAAGA GGGPDRLEPE MVRMVVESVE ENSTTRP00000012393/1-488 EEAGSPPFSP PAGGGVPEGT GAGGLAAAGA GGGPDRLEPE MVRMVVESVE 251 300 ENSBTAP00000008295/1-525 RIFRSFPRGD AGEVTSLLKL NKKLARSVGH IFEMDDNDSQ KEEEIRKYSI ENSP00000300131/1-525 RIFRSFPRGD AGEVTSLLKL NKKLARSVGH IFEMDDNDSQ KEEEIRKYSI bmy_03894T0/1-528 RIFRSFPRGD AGEVTSLLKL NKKLARSVGH IFEMDDNDSQ KEEEIRKYSI BACU020038/1-489 RIFRSFPRGD AGEVTSLLKL NKKLARSVGH IFEMDDNDSQ KEEEIRKYSI ENSTTRP00000012393/1-488 RIFRSFPRGD AGEVTSLLKL NKKLARSVGH IFEMDDNDSQ KEEEIRKYSI 301 350 ENSBTAP00000008295/1-525 IYGRFDSKRR EGKQLSLHEL TINEAAAQFC MRDNTLLLRR VELFSLSRQV ENSP00000300131/1-525 IYGRFDSKRR EGKQLSLHEL TINEAAAQFC MRDNTLLLRR VELFSLSRQV bmy_03894T0/1-528 IYGRFDSKRR EGKQLSLHEL TINEAAAQFC MRDNTLLLRR VELFSLSRQV BACU020038/1-489 IYGRFDSKRR EGKQLSLHEL TINEAAAQFC MRDNTLLLRR VELFSLSRQV ENSTTRP00000012393/1-488 IYGRFDSKRR EGKQLSLHEL TINEAAAQFC MRDNTLLLRR VELFSLSRQV 351 400 ENSBTAP00000008295/1-525 ARESTYLSSL KGSRLHPEEL GGPPLKKLKQ EVGEQSHSEI QQPPPGPESY ENSP00000300131/1-525 ARESTYLSSL KGSRLHPEEL GGPPLKKLKQ EVGEQSHPEI QQPPPGPESY bmy_03894T0/1-528 ARESTYLSSL KGSRLHPEEL GGPPLKKLKQ EVGEQSHSEI QQPPPGPESY BACU020038/1-489 ARESTYLSSL KGSRLHPEEL GGPPLKKLKQ EVGEQSHSEI QQPPPGPESY ENSTTRP00000012393/1-488 ARESTYLSSL KGSRLHPEEL GGPPLKKLKQ EVGEQSHSEI QQPPPGPESY 401 450 ENSBTAP00000008295/1-525 APPFRPSLEE DSASLSGESL DGHLQAVGSC PRLTPPPADL PLALPAHGLW ENSP00000300131/1-525 VPPYRPSLEE DSASLSGESL DGHLQAVGSC PRLTPPPADL PLALPAHGLW bmy_03894T0/1-528 AHPYRPSLEE DSASLSGESL DGHLQAVGSC PRLTPPPADL PLALPAHGLW BACU020038/1-489 AHPYRPSLEE DSASLSGESL DGHLQAVGSC PRLTPPPADL PLALPAHGLW ENSTTRP00000012393/1-488 AHPYRPSLEE DSASLSGESL DGHLQAVGSC PRLT-PPADL PLALPAHGLW 451 500 ENSBTAP00000008295/1-525 SRHILQQTLM DEGLRLARLV SHDRVGRLSP CVPAKPPLA- EFEEGLLDRC ENSP00000300131/1-525 SRHILQQTLM DEGLRLARLV SHDRVGRLSP CVPAKPPLA- EFEEGLLDRC bmy_03894T0/1-528 SRHILQQTLM DEGLRLARLV SHDRVGRLSP CVPAKPPLAG EAASSAIPKH BACU020038/1-489 SRHILQQTLM DEGLRLARLV SHDRVGRLSP CVPAKPPLA- ---------- ENSTTRP00000012393/1-488 SRHILQQTLM DEGLRLARLV SHDRVGRLSP CVPAKPPLA- ---------- 501 550 ENSBTAP00000008295/1-525 PA-PGPHPAL VEGRRNSVKV EAEASRQ- ENSP00000300131/1-525 PA-PGPHPAL VEGRRSSVKV EAEASRQ- bmy_03894T0/1-528 PCHPGPAQQS WCPRARREEE GCRHRRGQ BACU020038/1-489 ---------- ---------- -------- ENSTTRP00000012393/1-488 ---------- ---------- --------