KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:34:53 2014 Check: 00 .. Name: ENSP00000258494/1-923 Len: 925 Check: 8861 Weight: 1.00 Name: ENSBTAP00000008298/1-911 Len: 925 Check: 9247 Weight: 1.00 Name: ENSTTRP00000016083/1-831 Len: 925 Check: 9322 Weight: 1.00 Name: bmy_17825T0/1-731 Len: 925 Check: 3720 Weight: 1.00 Name: BACU000907/1-893 Len: 925 Check: 9355 Weight: 1.00 // 1 50 ENSP00000258494/1-923 MLRRGSQALR RFSTGRVYFK NKLKLALIGQ SLFGQEVYSH LRKEGHRVVG ENSBTAP00000008298/1-911 ---------- ----SQVCFK NKLKVALIGQ SLFGQEVYSH LCKEGHRVVG ENSTTRP00000016083/1-831 MLWQGNQALR RFSTGQVYFK NKLKVALIGQ SLFGQEVYSH LCKEGHRVVG bmy_17825T0/1-731 MLWQGNRALR RFSTGQVYFK NKLKVALIGQ SLFGQEVYSH LCKEGHRVVG BACU000907/1-893 MLWQGNRALR RFSTGQVYFK NKLKVALIGQ SLFGQEVYSH LCKEGHRVVG 51 100 ENSP00000258494/1-923 VFTVPDKDGK ADPLALAAEK DGTPVFKLPK WRVKGKTIKE VAEAYRSVGA ENSBTAP00000008298/1-911 VFTVPDKDGK ADPLALAAEK NGTPVFKFPR WRVKGKTIKE VAEAYRSVGA ENSTTRP00000016083/1-831 VFTVPDKDGK ADPLALAAEK NGTPVFKFPR WRVKGKTIKE VVEAYRSVGA bmy_17825T0/1-731 VFTVPDKDGK ADPLALAAEK NGTPVFKFPR WRVKGKTIKE VAEAYRSVDA BACU000907/1-893 VFTVPDKDGK ADPLALAAEK NGTPVFKFPR WRVKGKTIKE VAEAYRSVGA 101 150 ENSP00000258494/1-923 ELNVLPFCTQ FIPMDIIDSP KHGSIIYHPS ILPRHRGASA INWTLIMGDK ENSBTAP00000008298/1-911 ELNVLPFCTQ FIPMDVIDGP KHGSIIYHPS ILPRHRGASA INWTLIMGDK ENSTTRP00000016083/1-831 ELNVLPFCTQ FIPMDVIDSP KHGSIIYHPS ILPRHRGASA INWTLIMGDK bmy_17825T0/1-731 ELNVLPFCTQ FIPMDVIDSP KHGSIIYHPS VLPRHRGASA INWTLIMGDK BACU000907/1-893 ELNVLPFCTQ FIPMDVIDSP KHGSIIYHPS VLPRHRGASA INWTLIMGDK 151 200 ENSP00000258494/1-923 KAGFSVFWAD DGLDTGPILL QRSCDVEPND TVDALYNRFL FPEGIKAMVE ENSBTAP00000008298/1-911 KAGFSVFWAD DGLDTGPILL QRSCDVEPND TVDALYNRFL FPEGIKAMVE ENSTTRP00000016083/1-831 KAGFSVFWAD DGLDTGPILL QRSCDVEPND TVDALYNRFL FPEGIKAMVE bmy_17825T0/1-731 KAGFSVFWAD DGLDTGPILL QRSCDVEPND TVDALYNRFL FPEGIKAMVE BACU000907/1-893 KAGFSVFWAD DGLDTGPILL QRSCDVEPND TVDALYNRFL FPEGIKAMVE 201 250 ENSP00000258494/1-923 AVQLIADGKA PRIPQPEEGA TYEGIQKKEN AEISWDQSAE VLHNWIRGHD ENSBTAP00000008298/1-911 AVQLIADGKA PRIPQSEEGA TYEGIQKKEN AKISWNQSAE ALHNWIRGHD ENSTTRP00000016083/1-831 AVQLIADGKA ARMPQSEEAA TYEGIQKKEN AEISWDQSAE ALHNWIRGHD bmy_17825T0/1-731 AVQLIADGKA PRIPQSEEAA TYEGIQKKEN AEISWDQSAE ALHNWIRGHD BACU000907/1-893 AVQLIADGKA PRIPQSEEAA TYEGIQKKEN AEV------- ---------- 251 300 ENSP00000258494/1-923 KVPGAWTEIN GQMVTFYGST LLNSSVPPGE PLEIKGAKKP GLVTKNGLVL ENSBTAP00000008298/1-911 KVPGAWAEIN GQVVTFYGSS LLNSSVPPGE PLEIKGAEKP GLVTKNGLVL ENSTTRP00000016083/1-831 KVPGAWTEIN GQVVTFYGSS LLNSSIPPGE PLEIKGARKP GLVTKSGLVL bmy_17825T0/1-731 KVPGAWTEIN GQVVTFYGSS LLNSSIPPGE PLEIKGAKKP GLVTKSGLVL BACU000907/1-893 ---------- ---VTFYGSS LLNSSIPPGE PLEIKGAKKP GLVTKSGLVL 301 350 ENSP00000258494/1-923 FGNDGKALTV RNLQFEDGKM IPASQYFSTG ETSVVELTAE EVKVAETIKV ENSBTAP00000008298/1-911 FGNDGKALMV RNLQFEDGKM IPASQYFSSG EMSMVELTAE EVKVAETIKV ENSTTRP00000016083/1-831 FGNDGKALMV RNLQFEDGKM IPASQYFSAG ETSVVELTAE EVKVAETIKV bmy_17825T0/1-731 FGNDGKALMV RNLQFEDGKM IPASQYFSAG ETSVVELTAE EVKVAETIKV BACU000907/1-893 FGNDGKALMV RNLQFEDGKM IPAFQYFSAG ETSVVELTAE EVKVAETIKV 351 400 ENSP00000258494/1-923 IWAGILSNVP IIEDSTDFFK SGASSMDVAR LVEEIRQKCG GLQLQNEDVY ENSBTAP00000008298/1-911 IWAGILSNVP AIEDSTDFFK SGASSMDVAR LVEEIRQKCG GLQLQNEDVY ENSTTRP00000016083/1-831 IWAGILSNVP IIEDSTDFFK SGASSMDVVR LVEEIRQKCG GLQLQNEDVY bmy_17825T0/1-731 ---------- ---------- ---------- ---------- ---------- BACU000907/1-893 IWAGILSNVP VIEDSTDFFK SGASSMDVVR LVEEIRQKCG GLQLQNEDVY 401 450 ENSP00000258494/1-923 MATKFEGFIQ KVVRKLRGED QEVELVVDYI SKEVNEIMVK MPYQCFINGQ ENSBTAP00000008298/1-911 MATKFEDFIQ KVVRKLRGED QEAELVVDYV SKEINDMTVK MPYQCFINGQ ENSTTRP00000016083/1-831 MATKFEDFIQ KVVRKLRGED QEAELVVDYV SKEVNEMTVK MPHQCFINGR bmy_17825T0/1-731 ---------- ---------- ---------- SKEVNEMTVK MPYQCFINGQ BACU000907/1-893 MATKFEDFIQ KVVRKLRGED QEAELVVDYV SKEVNEMTVK MPYQCFINGQ 451 500 ENSP00000258494/1-923 FTDADDGKTY DTINPTDGST ICKVSYASLA DVDKAVAAAK DAFENGEWGR ENSBTAP00000008298/1-911 FTDAEDGQTY DTINPTDGST ICKVSYASLV DVDKAVAAAK DAFENGEWGR ENSTTRP00000016083/1-831 FTDADDGKTY DTINPTDGST ICKVSYASLV DVDKAVAAAK DAFENGEWGR bmy_17825T0/1-731 FTDADDGKTY DTINPTDGST ICKVSYASLV DVDKAVAAAK DAFENGEWGR BACU000907/1-893 FTDADDGKTY DTINPTDGST ICKVSYASLV DVDKAVAAAK DAFENGEWGR 501 550 ENSP00000258494/1-923 MNARERGRLM YRLADLLEEN QEELATIEAL DSGAVYTLAL KTHIGMSVQT ENSBTAP00000008298/1-911 MNARDRGRLM YRLADLMEEK QEELATIEAL DSGAVYTLAL KTHIGMSVQT ENSTTRP00000016083/1-831 MNARERGILM YRLADLLEEN QEELATIEAL DSGAVYTLAL KTHIGMSVQT bmy_17825T0/1-731 MNARERGILM Y--------- ---------- ---------- ---------- BACU000907/1-893 MNARERGILM YRLADLLEEN QEELATIEAL DSGAVYTLAL KTHIGMSVQT 551 600 ENSP00000258494/1-923 FRYFAGWCDK IQGSTIPINQ ARPNRNLTFT KKEPLGVCAI IIPWNYPLMM ENSBTAP00000008298/1-911 FRYFAGWCDK IQGSTIPINQ ARPNRNLTFT KKEPLGVCAI IIPWNYPLMM ENSTTRP00000016083/1-831 FRYFAGWCDK IQGTTIPINQ ARPNRNLTFT RKEPLGVCAI IIPWNYPLMM bmy_17825T0/1-731 ---------- ---------- ---------- -----SVCAI IIPWNYPLMM BACU000907/1-893 FRYFAGWCDK IQGSTIPINQ ARPNRNLTFT RKEPLGVCAI IIPWNYPLMM 601 650 ENSP00000258494/1-923 LAWKSAACLA AGNTLVLKPA QVTPLTALKF AELSVKAGFP KGVINIIPGS ENSBTAP00000008298/1-911 LAWKSAACLA AGNTLVLKPA QVTPLTALKF AELSVKAGFP KGVINIIPGS ENSTTRP00000016083/1-831 LAWKSAACLA AGNTLVLKPA QVTPLTALKF AELSVKAGFP KGVINIIPGS bmy_17825T0/1-731 LAWKSAACLA AGNTLVLKPA QVTPLTALKF AELSVKAGFP KGVINIIPGS BACU000907/1-893 LAWKSAACLA AGNTLVLKPA QVTPLTALKF AELSVKAGFP KGVINIIPGS 651 700 ENSP00000258494/1-923 GGIAGQRLSE HPDIRKLGFT GSTPIGKQIM KSCAVSNLKK VSLELGGKSP ENSBTAP00000008298/1-911 GGVVGQHLSE HPDIRKLGFT GSTLIGKQIM KSCAMSNLKK VSLELGGKSP ENSTTRP00000016083/1-831 -------VSE HPDIRKLGFT GSTLIGKQIM KSCAMSNLKK VSLELGGKSP bmy_17825T0/1-731 GSIAGQRLSE HPDIRKLGFT GSTLIGKQIM KSCAVSNLKK VSLELGGKSP BACU000907/1-893 GSIAGQRLSE HPDIRKLGFT GSTLIGKQIM KSCAVSNLKK VSLELGGKSP 701 750 ENSP00000258494/1-923 LIIFNDCELD KAVRM--GMG AVFFNKGENC IAAGRLFVEE SIHDEFVTRV ENSBTAP00000008298/1-911 LIIFSDCELD KAVRMPKGMG AVFFNKGENC IAAGRLFVEE SIHDEFVTRM ENSTTRP00000016083/1-831 LIIFSDCELD KAVRM--GMG AVFFNKGENC IAAGRLFVEE SIHDEFVTRV bmy_17825T0/1-731 LIIFSDCELD KAIRM----- ---------- VRVGQVH--- ---------- BACU000907/1-893 LIIFSDCELD KAVRM--GMG AVFFNKGENC IAAGRLFVEE SIHDEFVTRV 751 800 ENSP00000258494/1-923 VEEIKKMKIG DPLDRSTDHG PQNHKAHLEK LLQYCETGVK EGATLVYGGR ENSBTAP00000008298/1-911 VEEIKKMKIG DPLDRSTDHG PQNHKAHLEK LLQYCEAGVK EGATLVYGGR ENSTTRP00000016083/1-831 VEEIKKMKIG DPLDRSTDHG PQNHKAHLEK LLQYCEAGVK EGATLVYGGR bmy_17825T0/1-731 ---------- --LTRSTDHG PQNHKAHLEK LLQYCEAGVK EGATLVYGGR BACU000907/1-893 VEEIKKMKIG DPLDRSTDHG PQNHKAHLEK LLQYCEAGVK EGATLVYGGR 801 850 ENSP00000258494/1-923 QVQRPGFFME PTVFTDVEDY MYLAKEESFG PIMVISKFQN GDIDGVLQRA ENSBTAP00000008298/1-911 QVQRPGFFME PTVFTDVEDH MYLAKEESFG PIMVISKFQN GDVDGVLQRA ENSTTRP00000016083/1-831 QVQRPGFFME PTVFTDVEDH MYLAKEESFG PIMVISKFQN ---------- bmy_17825T0/1-731 QVQRPGFFME PTVFTDVEDH MYLAKEESFG PIMVISKFQN GDIDGVLQRA BACU000907/1-893 RVQRPGFFME PTVFTDVEDH MYLAKEESFG PIMVISKFQN GDIDGVLQRA 851 900 ENSP00000258494/1-923 NSTEYGLASG VFTRDINKAM YVSEKLEAGT VFINTYNKTD VAAPFGGVKQ ENSBTAP00000008298/1-911 NNTEYGLASG VFTRDINKAM YVSEKLEAGT VFINTYNKTD VAAPFGGFKQ ENSTTRP00000016083/1-831 ---------- ---------- ---------- ---------- ---------- bmy_17825T0/1-731 NNTEYGLASG VFTRDINKAM YVSEKLEAGT VFINTYNKTD VAAPFGGVKQ BACU000907/1-893 NNTEYGLASG VFTRDINKAM YVSEKLEAGT VFINTYNKTD VAAPFGGVKQ 901 950 ENSP00000258494/1-923 SGFGKDLGEE ALNEYLKTKT VTLEY ENSBTAP00000008298/1-911 SGFGKDLGEE ALNEYLKTKT VTLEY ENSTTRP00000016083/1-831 ---------- ---------- ----- bmy_17825T0/1-731 SGFGKDLGEE ALNEYLKTKT VTLEY BACU000907/1-893 SGFGKDLGEE ALNEYLKTKT VTLEY