KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:34:57 2014 Check: 00 .. Name: ENSP00000330959/1-398 Len: 451 Check: 2768 Weight: 1.00 Name: ENSTTRP00000005570/1-393 Len: 451 Check: 1379 Weight: 1.00 Name: ENSBTAP00000008322/1-400 Len: 451 Check: 3446 Weight: 1.00 Name: bmy_17708T0/1-337 Len: 451 Check: 9356 Weight: 1.00 Name: BACU017677/1-417 Len: 451 Check: 6350 Weight: 1.00 // 1 50 ENSP00000330959/1-398 ---------- ---------- -----MLRLY VLVMGVSAFT LQPAAHTGAA ENSTTRP00000005570/1-393 ---------- ---------- -----MFTWS MWLLCVSVFT IRPEEHMVAA ENSBTAP00000008322/1-400 ---------- ---------- -----MFLLS VLIMGVSTFA VQSEEHSVAA bmy_17708T0/1-337 ---------- ---------- ---------- ---------- ---------- BACU017677/1-417 MQSCRLWGAG PAVSTSCVLQ KLPGVMFIWS MLMMCVSVFT IQPEEHMVAA 51 100 ENSP00000330959/1-398 RSCRFRGRHY KREFRLEGEP VALRCPQVPY WLWASVSPRI NLTWHKNDSA ENSTTRP00000005570/1-393 GSCQFHGRHP KTRFKVEGEP VAMRCPQGPY W--DSATTHV SVTWRRNNSA ENSBTAP00000008322/1-400 GSCRFHGRHP KTRFKVEGEP LVLTCPQVLH W--ESTSAHV NVTWRRNDSA bmy_17708T0/1-337 ---------- ---------- --MRCPQVPY W--DSASTHV NVTWRRNDST BACU017677/1-417 GSCQFHGRHP KTRFKVEGEP VAMRCPQVPY W--DSASTHV NVTWRRNDST 101 150 ENSP00000330959/1-398 RTVPGEEETR MWAQDGALWL LPALQEDSGT YVCTTRNASY CDKMSIELRV ENSTTRP00000005570/1-393 TMVPGEEELR VWVQDGSLWI VPASRGDSGT YICTVXXXXX XXXXXXXXXX ENSBTAP00000008322/1-400 VAVPGEEESR VWVRDGALWI VPASQADSGT YICTVRNASY CDKMSVELRV bmy_17708T0/1-337 TMVPREEEMR VWVQDGGLWI VPASRGDSGT YICTVRNASY CDEMSVELRV BACU017677/1-417 TTVPGEEEMR VWVQDGGLWI VPASRGDSGT YICTVRNASY CDEMSVELRV 151 200 ENSP00000330959/1-398 FENTDAFLPF ISYPQILTLS TSGVLVCPDL SEFTRDKTDV KIQWYKDSLL ENSTTRP00000005570/1-393 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXDSVP ENSBTAP00000008322/1-400 FEKTDASVPL IFYPQIIPLS ASGLLVCPDL SEFIGNRTDV EIQWYKDSVP bmy_17708T0/1-337 FEKTEASLPL ISYPQIITLS ASGLLVCPDL SEFIGNKTDV KIRWYKDSLP BACU017677/1-417 FEKTEASLPL ISYPQIITLS ASGLLVCPDL SEFIGNKTDV KIRWYKDSLP 201 250 ENSP00000330959/1-398 LDKDNEKFLS VRGTTHLLVH DVALEDAGYY RCVLTFAHEG QQYNITRSIE ENSTTRP00000005570/1-393 LDQDNEKFLS VRG-TRLLVN NVSLEDAGYY QCAMTFAHRG RKYNITRNIK ENSBTAP00000008322/1-400 LDQDNQKFLN VRG-TRLLVN NVSMEDAGYY TCAMTYAHKG RQYNITRNIK bmy_17708T0/1-337 LDQDNEKFLS VRG-TRLVVN NVSLEDAGYY RCAMTFAHRG RQYNITRNIK BACU017677/1-417 LDQDSEKFLS VRG-ARLVVN NVSLEDAGYY RCAMTFAHRG RQYNITRNIK 251 300 ENSP00000330959/1-398 LRIKKKKEET IPVIISPLKT ISASLGSRLT IPCKVFLGTG TPLTTMLWWT ENSTTRP00000005570/1-393 LRVKKRERET IPVIISPHQT ISASLGSRLT IPCKVFLGAG IQATTLLWWT ENSBTAP00000008322/1-400 LRVKKRDEET IPVIISPHQT ISASLGSRLT IPCKVFLGAG IHTTTLLWWT bmy_17708T0/1-337 LRVKKREEET IPVIISPHQT ISASL----- ---------- ---------- BACU017677/1-417 LRVKKREEET IPVIISPHQT ISASLGSRLT IPCKVFLGAG IHATTLLWWT 301 350 ENSP00000330959/1-398 ANDTHIESAY PGGRVTEGPR QEYSENNENY IEVPLIFDPV TREDLHMDFK ENSTTRP00000005570/1-393 ANNTHVEDAY KGGRVTEGRR QEYSENNENY IEVPLIFDPV VREDLHTDFK ENSBTAP00000008322/1-400 ANNTFIEDAY HGGRVTEGER QAYSENNENY IEVPLIFDPV RREDLHTDFK bmy_17708T0/1-337 ------EDAY QGGRVTEGQR QEYSENNENY IEVPLIFDPV VREDLHTDFK BACU017677/1-417 ANNTHVADAY QGGRVTEGQR QEYSENNENY IEVPLIFDPV VREDLHTDFK 351 400 ENSP00000330959/1-398 CVVHNTLSFQ TLRTTVKE-- ---------- ---------A SSTFSWGIVL ENSTTRP00000005570/1-393 CVVRNTMSFQ MLRTTVKE-- ---------- ---------- AATFSWEITL ENSBTAP00000008322/1-400 CVVRNTMSSQ TLRTTVKE-- ---------- ---------- AATFSWEIML bmy_17708T0/1-337 CVVRNTMSFQ MLRTTVKEVH GNVLSGGRSV FTPHMSVLPT AATFSWKITL BACU017677/1-417 CVVRNTMSFQ MLRTTVKE-- ---------- ---------- AATFSWKITL 401 450 ENSP00000330959/1-398 APLSLAFLVL GGIWMHRRCK HRTGKADGL- TVLWPHHQDF QSYPK----- ENSTTRP00000005570/1-393 APLSLIFLVL GGIWMHRRCK RRTGKAYDLM MELKTSH-DS QSYE------ ENSBTAP00000008322/1-400 APLSLIVLVL GGIWMHRRYK RRTGKAYGL- MELKTGHPDS QSYPSKIKEI bmy_17708T0/1-337 APLSLIFLVL GGIWMHRRCK RRSGKAYGL- MELRPAIRFS ILSE------ BACU017677/1-417 APLSLIFLVL GGIWMHRRCK RRTGKAYGL- MELKTSHQ-- ILNPL----- 451 500 ENSP00000330959/1-398 - ENSTTRP00000005570/1-393 - ENSBTAP00000008322/1-400 K bmy_17708T0/1-337 - BACU017677/1-417 -