KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:34:57 2014 Check: 00 .. Name: ENSP00000363398/1-676 Len: 679 Check: 6730 Weight: 1.00 Name: ENSBTAP00000008330/1-675 Len: 679 Check: 2235 Weight: 1.00 Name: ENSTTRP00000004779/1-674 Len: 679 Check: 9015 Weight: 1.00 Name: bmy_02031T0/1-675 Len: 679 Check: 2893 Weight: 1.00 Name: BACU007580/1-675 Len: 679 Check: 3799 Weight: 1.00 // 1 50 ENSP00000363398/1-676 MQSWRRRKSL WLALSASWLL LVLLGGFSLL RLALPPRPRP GASQGWPRWL ENSBTAP00000008330/1-675 MQSW-RRKSL WLALSASW-L LILLRVFPVL RLAEPARRQA GAPQGWPRWL ENSTTRP00000004779/1-674 MQSW-RRKSL WLALLAS--L LVLLGLFPLL RLAVPTSPRA AAPQGWPRWL bmy_02031T0/1-675 MQSW-RWKSL WLALLASW-L LVLLGVFPLL RLAVPTRPRA GAPQGWPRWL BACU007580/1-675 MQSW-RRKSL WLALLASW-L LILVGVFPFL RLAVPTRPRA GAPQGWPRWL 51 100 ENSP00000363398/1-676 DAELLQSFSQ PGELPEDAVS PPQAPHGGSC NWESCFDTSK CRGDGLKVFV ENSBTAP00000008330/1-675 DAELLQSFSQ PGELLEDGPQ PPQAPRGGSC YRGACFDASR CRGGGLKVFV ENSTTRP00000004779/1-674 DAELLQSFAK PGELLEDGPR PPQALRGGSC NWGACFDTSK CRGGGLKVFV bmy_02031T0/1-675 DAELLQSFAK PGELLEDGPQ PPQALRGGSC NWGACFDTSK CRGGGLKVFV BACU007580/1-675 DAELLQSFAK PGELLEDGPQ PPQALRGGSC NWGACFDTSK CRGGGLKVYV 101 150 ENSP00000363398/1-676 YPAVGTISET HRRILASIEG SRFYTFSPAG ACLLLL-LSL DAQTGECSSM ENSBTAP00000008330/1-675 YPAVGPISET PRKVLTSIEG SRYHTASAAE ACLLILVLSP DTPAGECHPE ENSTTRP00000004779/1-674 YPAAGPVSET RRRILASVEG SRYHTLSAAE ACLLLL-LSP DTSTGECDPV bmy_02031T0/1-675 YPAAGPVSET HRRILASIEG SRYHTLSAAE ACLLLL-LSP DTPTGECDPV BACU007580/1-675 YPAAGPVSET HRRILASIEG SRYHTLSAAE ACLLLL-LSP DTPTGECDPV 151 200 ENSP00000363398/1-676 PLQWNRGRNH LVLRLHPAPC PRTFQLGQAM VAEASPTVDS FRPGFDVALP ENSBTAP00000008330/1-675 LPQWDGGKNH LVLSLHPAPC LRIFQLGQAM VAEASPTMDT FRPGFDVALP ENSTTRP00000004779/1-674 PPQWDGGRNH LVLSLHPAPC PRTFQLGQAM VAEASPTVDT FRPGFDVALP bmy_02031T0/1-675 PPQWDGGRNH LVLSLHPAPC PRTFQLGQAM VAEASPTVDT FRPGFDVALP BACU007580/1-675 PPQWDGGRNH LVLSLRPAPC PRTFQLGQAM VAKASPTVDT FRPGFDVALP 201 250 ENSP00000363398/1-676 FLPEAHPLRG GAPGQLRQHS PQPGVALLAL EEERGGWRTA DTGSSACPWD ENSBTAP00000008330/1-675 LLPEAHPLRG GALGQLQQHS PLPGVALIAM AEERGGWRTV GTNFSACPWD ENSTTRP00000004779/1-674 LLPEAHPLRG GAPGQLRQHS PRPGVALLAL AEDGGRWHVA GTDFSACPWD bmy_02031T0/1-675 LLPEAHPLRG GTPGQLRQHS PRPGVALLAL AEDRGRWHVA GTNFSACPWD BACU007580/1-675 LLPEAHPLRG GTPGQLRQHS PRPGVALLAL AEDRGTWHVA GTDFSACPWD 251 300 ENSP00000363398/1-676 GRCEQDPGPG QTQRQETLPN ATFCLISGHR PEAASRFLQA LQAGCIPVLL ENSBTAP00000008330/1-675 GRCEQDHGPK QTHPRATLPN ATFCLIPGRN PDAL-HFLQA LQAGCIPVLL ENSTTRP00000004779/1-674 GRCEQDRGPK QTHPGATLPN ATFCLIPGRS PDVL-HFLQA LQAGCIPVLL bmy_02031T0/1-675 GRCEQDRGPK QTHPGATLPN ATFCLIPGRS PDAL-HFLQA LQAGCIPVLL BACU007580/1-675 GRCEQDRGPK QTHPGATLPN ATFCLIPGRS PDAL-HFLQA LQAGCIPVLL 301 350 ENSP00000363398/1-676 SPRWELPFSE VIDWTKAAIV ADERLPLQVL AALQEMSPAR VLALRQQTQF ENSBTAP00000008330/1-675 SPRWELPFSE VIDWTKAAVV ADERLPLQVL AALQEMPLTR VLALRQQAQF ENSTTRP00000004779/1-674 SPRWELPFSE VIDWTKAAIV ADERLPLQVL TALQEMPLTR VLALRQQTQF bmy_02031T0/1-675 SPRWELPFSE VIDWTKAAIV ADERLPLQVL TALQEMPLTR VLALRQQTQF BACU007580/1-675 SPRWELPFSE VIDWTKAAIV ADERLPLQVL TALQEMPLTR VLALRQQTQF 351 400 ENSP00000363398/1-676 LWDAYFSSVE KVIHTTLEVI QDRIFGTSAH PSLLWNSPPG ALLALSTFST ENSBTAP00000008330/1-675 LWDAYFSSVE KVIHTTLEII QDRVSGASAH PSLLWNSPPG ALLALSTFST ENSTTRP00000004779/1-674 LWDAYFSSVE KVVHTTLEII QDRIFGPSAH PSLLWNRPPG AILALPTFSP bmy_02031T0/1-675 LWNAYFSSVE KVIHTTLEII QDRIFGASAH PSLLWNSPPG AILALPTFSP BACU007580/1-675 LWDAYFSSVE KVIHTTLEII QDRIFGASAH PSLLWNSPPG AILALPTFSP 401 450 ENSP00000363398/1-676 SPQDFPFYYL QQGSRPEGRF SALIWVGPPG QPPLKLIQAV AGSQHCAQIL ENSBTAP00000008330/1-675 SPSDFPFYHL QQGSRPLGRF SALIWVGALG QPPLKLIQAV AGAQHCAQIL ENSTTRP00000004779/1-674 SPSDFPFYHL QQGSRPLGRF SALIWGGAPG QPPLKLIQAV AGSQHCAQIL bmy_02031T0/1-675 SPSDFPFYHL QQGSRPLGRF SALIWVGAPG QPPLKLIQAV AGSQHCAQIL BACU007580/1-675 SPSDFPFYHL QQGSRPLGRF SALIWVGAPG QPPLKLIQAV AGSQHCAQIL 451 500 ENSP00000363398/1-676 VLWSNERPLP SRWPETAVPL TVIDGHRKVS DRFYPYSTIR TDAILSLDAR ENSBTAP00000008330/1-675 VLWSSKKPPP PRWPETAVPL TVLDGHRKAS DRFLPYSAIS TDAILSLDAH ENSTTRP00000004779/1-674 VLWSSEKPPP TRWPKTAVPL TVIDGHRKVS DRFFPYSAIS TDAILSLDAH bmy_02031T0/1-675 VLWSSEKPSP TRWPKTAVPL TVIDGHRKVS DRFFPYSAIS TDAILSLDAH BACU007580/1-675 VLWSSEKPSP TRWPKTAVPL TVIDGHRKVS DRFFPYSALS TDAILSLDAH 501 550 ENSP00000363398/1-676 SSLSTSEVDF AFLVWQSFPE RMVGFLTSSH FWDEAHGGWG YTAERTNEFS ENSBTAP00000008330/1-675 SSLSTSEVDF AFMVWQSFPE RMVGFLTWSH FWDETQGGWG YTGERANEFS ENSTTRP00000004779/1-674 SSLSTSEVDF AFVVWQSFPE RMVGFLTWSH FWDEARGGWG YTAKRTNEFS bmy_02031T0/1-675 SSLSTSEVDF AFVVWQSFPE RMVGFLTWSH FWDEAQGGWG YTAKRTNEFS BACU007580/1-675 SSLSTSEVDF AFVVWQSFPE RMVGFLTWSH FWDEARGGWG YTAKRTNEFS 551 600 ENSP00000363398/1-676 MVLTTAAFYH RYYHTLFTHS LPKALRTLAD EAPTCVDVLM NFIVAAVTKL ENSBTAP00000008330/1-675 MVLTSAAFYH RYYHTLFTHS LPKALRTLAD ESPPCVEVLM NFLVAAVTKL ENSTTRP00000004779/1-674 MVLTSAAFYH RYYHTLFTHS LPKALRTLAD EAPTCVDVLM NFLVASVTKL bmy_02031T0/1-675 MVLTSAAFYH RYYHTLFTHS LPKALRTLAD EAPTCVDVLM NFLVASVTKL BACU007580/1-675 MVLTSAAFYH RYYHTLFTHS LPKALRTLAD EAPTCADVLM NFLVASVTKL 601 650 ENSP00000363398/1-676 PPIKVPYGKQ RQEA--APLA PGGPGPRPKP PAPAPDCINQ IAAAFGHMPL ENSBTAP00000008330/1-675 PPIKVPYGPW HQEAK-PPLV PGSPRLRSEP RPAAQDCINQ MAAGFGHMPL ENSTTRP00000004779/1-674 PPIKVPYGMW HQEARPPPLE PGGPGLRQEP QPAAQNCINQ MAAGFGHMPL bmy_02031T0/1-675 PPIKVPYGMW HQEARPPPLE PGGPGLRQEP QPAAQNCINQ MAAGFGHMPL BACU007580/1-675 PPIKVPYGMW HQEARPPPLE PGGPGLRQEP QPAAQNCINQ MAAGFGRMPL 651 700 ENSP00000363398/1-676 LSSRLRLDPV LFKDPVSVQR KKYRSLEKP ENSBTAP00000008330/1-675 VSSRLRLDPV LFKDPVSVLR KKYRSLEKP ENSTTRP00000004779/1-674 VSSRLRLDPV LFKDPVSVLR KKYRSLEKP bmy_02031T0/1-675 VSSRLRLDPV LFKDPVSVLR KKYRSLEKP BACU007580/1-675 VSSRLRLDPV LFKDPVSVLR KKYRSLEKP