KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:00 2014 Check: 00 .. Name: ENSP00000256447/1-661 Len: 661 Check: 393 Weight: 1.00 Name: ENSBTAP00000008348/1-661 Len: 661 Check: 8406 Weight: 1.00 Name: ENSTTRP00000009575/1-620 Len: 661 Check: 8574 Weight: 1.00 Name: bmy_12611T0/1-661 Len: 661 Check: 5929 Weight: 1.00 Name: BACU019657/1-620 Len: 661 Check: 5320 Weight: 1.00 // 1 50 ENSP00000256447/1-661 MAFDVSCFFW VVLFSAGCKV ITSWDQMCIE KEANKTYNCE NLGLSEIPDT ENSBTAP00000008348/1-661 MAPCVSCFLL AVLISAGCKA IPSSDPKCTE KEGNRTYNCE NLGLREIPDT ENSTTRP00000009575/1-620 ---------- ---------- ---------- ---------- -LGLREIPDT bmy_12611T0/1-661 MAPRVGCFLL AVLISASCKV ITSSNPMCTE KEANKTYNCE NLGLREIPDT BACU019657/1-620 ---------- ---------- ---------- ---------- -LDLREIPDT 51 100 ENSP00000256447/1-661 LPNTTEFLEF SFNFLPTIHN RTFSRLMNLT FLDLTRCQIN WIHEDTFQSH ENSBTAP00000008348/1-661 LPNTTEVLEF SFNFLPTIQN TTFSRLINLI FLDLTRCQIN WVHEDTFQSH ENSTTRP00000009575/1-620 LPNTTEFLEF GFNFLPAIQN ITFSRLINLI FLDLTRCQIN WVHEDTFQNH bmy_12611T0/1-661 LPNTTEFLEF GFNFLPTXQN ITFSRLINLI FLDLTRCQIN WVHEDTFQNH BACU019657/1-620 LPNTTEFLEF GFNFLPTIQN ITFSRLINLI FLDLTRCQIN WVREDTFQNH 101 150 ENSP00000256447/1-661 HQLSTLVLTG NPLIFMAETS LNGPKSLKHL FLIQTGISNL EFIPVHNLEN ENSBTAP00000008348/1-661 HQLNTIVLTG NPLIFMAETS LTGPKFLKHL FLTQTGISNL EFIPVHNLEN ENSTTRP00000009575/1-620 HQLNTIVLTG NPLIFMAETS LTGPKSLKHL FLTQTGISSL EFIPVHNLEN bmy_12611T0/1-661 HQLNTIVLTG NPLIFMAETS LTGPKLLKHL FLTQTGISNL EFIPVHNLEN BACU019657/1-620 HQLNTIVLTG NPLIFMAETS LTGPKLLKHL FLTQTGISNL EFIPVHNLEN 151 200 ENSP00000256447/1-661 LESLYLGSNH ISSIKFPKDF PARNLKVLDF QNNAIHYISR EDMRSLEQAI ENSBTAP00000008348/1-661 LESLHLGSNH ISSINLPENF PTQNLKVLDF QNNAIHYISR KDTNSLEQAT ENSTTRP00000009575/1-620 LESLHLGSNC ISSINLPENF PTQNLKVLDF QNNAIHYISS KDINALEQAT bmy_12611T0/1-661 LESLHLGSNH ISSINLPENF PTQNLKVLDF QNNAIHYISS KDINALEQAT BACU019657/1-620 LESLHLGSNH ISSINLPENF PTQNLKVLDF QNNAIHYISS KDINGLEQAT 201 250 ENSP00000256447/1-661 NLSLNFNGNN VKGIELGAFD STIFQSLNFG GTPNLSVIFN GLQNSTTQSL ENSBTAP00000008348/1-661 NLSLNFNGND IKGIEPGAFS SKIFQSLKFG GSLNLFIIFK GLQNSTLQSL ENSTTRP00000009575/1-620 NLSLNFNGND IKGIEPGAFN SKIFQSLKFG GSLNLSVILK GLQNSTIQSL bmy_12611T0/1-661 NLSLNFNGND IKGIEPGAFN SKIFQSLKFG GSLNLSVILK GLQNSTIQSL BACU019657/1-620 NLSLNFNGND IKGIEPGAFN SKIFQSLKFG GSLNLSVILK GLQNSTIQSL 251 300 ENSP00000256447/1-661 WLGTFEDIDD EDISSAMLKG LCEMSVESLN LQEHRFSDIS STTFQCFTQL ENSBTAP00000008348/1-661 WLGTFEDTDD QYLTSATFEG LCDMSVESIN LQKHRFSDLS SSTFRCFTRV ENSTTRP00000009575/1-620 WLGTFEDTDD QDLTSATFEG LCDMAVESIN LQKHHFGGFS PSTFRCFTRL bmy_12611T0/1-661 WLGTFEDTDD QDLTSATFEG LCDMAVESIN LQKHHFDGFS PSTFRCFTRL BACU019657/1-620 WLGTFEDTDD QDLTSATFEG LCDMAVESIN LQKHHFDGFS PSTFRCFTRL 301 350 ENSP00000256447/1-661 QELDLTATHL KGLPSGMKGL NLLKKLVLSV NHFDQLCQIS AANFPSLTHL ENSBTAP00000008348/1-661 QELDLTAAHL NGLPSGIEGM NSLKKLVLNA NSFDQLCQIN AASFPSLRDL ENSTTRP00000009575/1-620 QELDLTATHL TGLPSGIEGM NSLKKLVLNA NSFDQLCQIN AASFLSLTDL bmy_12611T0/1-661 QELDLTAAHL KGLPSGIEGM NSLKKLVLNA NSFDQLCQIN AASFPSLTDL BACU019657/1-620 QELDLTAAHL KGLPSGIEGM NSLKKLVLNA NSFDQLCQIN AASFPSLTDL 351 400 ENSP00000256447/1-661 YIRGNVKKLH LGVGCLEKLG NLQTLDLSHN DIEASDCCSL QLKNLSHLQT ENSBTAP00000008348/1-661 YIKGNMRKLD LGTRCLEKLE NLQKLDLSHS DIEASDCCNL QLKNLRHLQY ENSTTRP00000009575/1-620 SVKGNRKKLD LGVRCLEKLE NLQKLDLSHS DIEASDCCNL QLKNLPHLQY bmy_12611T0/1-661 YVKGNMNKLD LGARCLEKLE NLQKLDLSHS DIEASDCCNL QLKNLPHLQY BACU019657/1-620 YVKGNMKKLD LGARCLEKLE NLQKLDLSHS DIEASDCCNL QLKNLPHLQY 401 450 ENSP00000256447/1-661 LNLSHNEPLG LQSQAFKECP QLELLDLAFT RLHINAPQSP FQNLHFLQVL ENSBTAP00000008348/1-661 LNLSYNEPLG LEDQAFKECP QLELLDVAFT HLHVKAPHSP FQNLHLLRVL ENSTTRP00000009575/1-620 LNLSYNEPLG LEDQAFKECP WLELLDLAFT HLHVKPSQSP FQNLHLLRVL bmy_12611T0/1-661 LNLSYNEPLG LEDQAFKECP RLELLDLAFT HLLVKASQSP FQNLHLLRVL BACU019657/1-620 LNLSYNEPLG LEDQAFKECP RLELLDLAFT HLLVKAAQSP FQNLHLLRVL 451 500 ENSP00000256447/1-661 NLTYCFLDTS NQHLLAGLPV LRHLNLKGNH FQDGTITKTN LLQTVGSLEV ENSBTAP00000008348/1-661 NLSHCLLDTS NQHLLAGLQD LRHLNLQGNS FQDGSISKTN LLQMVGSLEI ENSTTRP00000009575/1-620 NLSHCLLDTS NRHLLEGLLD LRHLNVQGNH FQDGSLSKTN LLQTVSSLEI bmy_12611T0/1-661 NLSHCLLDTS NHHLLEGLLD LRHLNVQGNH FQDGSISKTN LLQTVSSLEI BACU019657/1-620 NLSHCLLDTS NRHLLEGLLD LRHLNVQGNH FQDGSISKTN LLQTVSSLEI 501 550 ENSP00000256447/1-661 LILSSCGLLS IDQQAFHSLG KMSHVDLSHN SLTCDSIDSL SHLKGIYLNL ENSBTAP00000008348/1-661 LILSSCNLLS IDQQAFHGLR NVNHLDLSHN SLTGDSMDAL SHLKGLYLNM ENSTTRP00000009575/1-620 LILSSCELLS IDQQAFHGLG KMSHLDLSHN SLTGDSMDAL SPLKGIYLNL bmy_12611T0/1-661 LILSSCDLLS IDQQAFHGLG KMSHLDLSHN SLTGBSMDAL SPLKGIYLNL BACU019657/1-620 LILSSCDLLS IDQQAFHGLG NMSHLDLSHN SLTGDSMDAF SPLKGLYLNL 551 600 ENSP00000256447/1-661 AANSINIISP RLLPILSQQS TINLSHNPLD CTCSNIHFLT WYKENLHKLE ENSBTAP00000008348/1-661 ASNNIRIIPP HLLPALSQQS IINLSHNPLD CTCSNIHFIT WYKENLHKLE ENSTTRP00000009575/1-620 AANNIRIIPS HLLPTLSQQS TINLSHNPLD CTCSNIHFIT WYKENLHKLE bmy_12611T0/1-661 AANNIRIIPP HLLPTLSQQS TINLSHNPLD CTCSNIHFIT WYKENLHKLE BACU019657/1-620 AANNIRIIPP HLLPALSQQS TINLSHNPLD CTCSNIHFIT WYKENLHKLE 601 650 ENSP00000256447/1-661 GSEETTCANP PSLRGVKLSD VKLSCGITAI GIFFLIVFLL LLAILLFFAV ENSBTAP00000008348/1-661 DSEETTCANP PSLRGVKLSD VKLHCGITGV GIFFIVVFVF LLILLLIFSV ENSTTRP00000009575/1-620 GSEETVCANP PPLRGVKLSD VKLSCGMTGM GIFFLVVFVF LLIVLLIFSV bmy_12611T0/1-661 GSEETVCANP PRLRGVKLSD VKLSCGLTGM GIFFLVVFVF LLIILLIFSV BACU019657/1-620 GSEETVCANP PPLRGVKLSD VKLSCGLTGT GIFFLVVFVF LVIILLIFSV 651 700 ENSP00000256447/1-661 KYLLRWKYQH I ENSBTAP00000008348/1-661 KFILRWKYQH I ENSTTRP00000009575/1-620 KFLLRWKYQH I bmy_12611T0/1-661 KFLLRWKYQH I BACU019657/1-620 KFLLRWKYQH I