KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:02 2014 Check: 00 .. Name: ENSTTRP00000014926/1-530 Len: 546 Check: 659 Weight: 1.00 Name: bmy_13652T0/1-530 Len: 546 Check: 6297 Weight: 1.00 Name: BACU002890/1-530 Len: 546 Check: 5966 Weight: 1.00 Name: ENSP00000274605/1-544 Len: 546 Check: 5116 Weight: 1.00 Name: ENSBTAP00000008355/1-543 Len: 546 Check: 3029 Weight: 1.00 // 1 50 ENSTTRP00000014926/1-530 MATAPGPAGI AMGNVGSLLE RQDISPEELR AALAGSRGSR QPDGLFRKSL bmy_13652T0/1-530 MATAPGAAGI AMGNVGSLLE RQDFSPEELR AALAGSRGSR QPDGLFRKGL BACU002890/1-530 MATAPGAAGI AMGNVGSLLE RQDFSPEELR AALAGSRGSR QPDGLFRKGV ENSP00000274605/1-544 MATAPGPAGI AMGSVGSLLE RQDFSPEELR AALAGSRGSR QPDGLLRKGL ENSBTAP00000008355/1-543 MATAPGPAGI AMGSVGSLLE RQDFSPEELR AALAGSRGSR QPDGLLRKGL 51 100 ENSTTRP00000014926/1-530 GQRELFSYLH LPKKDSKT-- -TKRASRTEP ADYATLYYQE HPRASDFSKT bmy_13652T0/1-530 GQRELFSYLH LPKKDSKT-- -TKKAPRNEP ADYATLYYQE HPRAGDFSKT BACU002890/1-530 GQRELFSHLH LPKKDSKT-- -TKKAPRNEP ADYATLYYQE HPRAGDFSKT ENSP00000274605/1-544 GQREFLSYLH LPKKDSKSTK NTKRAPRNEP ADYATLYYRE HSRAGDFSKT ENSBTAP00000008355/1-543 GQRELLSYLH LPKKDGKT-- -TKRAPRNEP ADYATLYYQE HPRAGDFSKT 101 150 ENSTTRP00000014926/1-530 SLPERGRFDK CHIRPSVFKP TVGTGKGFLS TQSLAAHKGQ KLWRSNGSLH bmy_13652T0/1-530 SLPERGRFDK CHIRPSVFKP AVGTGKGFLS MQSLAAHKGQ KLWRSNGSLH BACU002890/1-530 SLPERGRFDK CHIRPSVFKP AVGTGKGFVS TQSLAAHKGQ KLWRSNGSLH ENSP00000274605/1-544 SLPERGRFDK CRIRPSVFKP TAGNGKGFLS MQSLASHKGQ KLWRSNGSLH ENSBTAP00000008355/1-543 SLPERGRFDK CRIRPSVFKP ASGTGKGFLS MQSLAAHKGQ KLWRSNGSLH 151 200 ENSTTRP00000014926/1-530 TLACHPPLSP GPQASQAQAR AQLLHALSLD EGGPEPEPSL SDSSSGGSFG bmy_13652T0/1-530 TLACHPPLSP GPRASQAQAR AQLLQALSLD EGGPEPEPSL SDSSSGGSFG BACU002890/1-530 TLACHPPLSP GARASQAQAR AQLLQALSLD EGGPEPEPSL SDSSSGGSFG ENSP00000274605/1-544 TLACHPPLSP GPRAS--QAR AQLLHALSLD EGGPEPEPSL SDSSSGGSFG ENSBTAP00000008355/1-543 TLACHPPLSP GPRASQAQAR AQLLHALSLD EGGPEPEPSL SDSSSGGSFG 201 250 ENSTTRP00000014926/1-530 RSPSTGPGPF CSSLGHTNHL GGSLDRASRG PKE----AML SCLPEPPPPY bmy_13652T0/1-530 RGPSTGPGPF CSSLGHINHL GGSLDRASRG PKE----AVL SCLPEPPPPY BACU002890/1-530 RGPSTGPSPF CSSLGHVNHL GGSLDRASRG AKE----AVL SCLPEPPPPY ENSP00000274605/1-544 RSPGTGPSPF SSSLGHLNHL GGSLDRASQG PKEAGPPAVL SCLPEPPPPY ENSBTAP00000008355/1-543 RSPSTGPGPF SSSLGHINHL GGSLDRASRG SKEVGPLALL NCLPEPPPPY 251 300 ENSTTRP00000014926/1-530 EFSCPTAEDM VAVLPDTCEE LKRGLSDENG TNPFTQVLEE RQRLWLSELK bmy_13652T0/1-530 EFSCPTAEDM VAMLPDTCEE LKRGLSDEDG TNPFTQVLEE RQRLWLSELK BACU002890/1-530 EFSCPTAEDT VAALPDSCEE LKRGLSDEDG TNPFKQVLEE RQRLWLSELK ENSP00000274605/1-544 EFSCSSAEEM GAVLPETCEE LKRGLGDEDG SNPFTQVLEE RQRLWLAELK ENSBTAP00000008355/1-543 EFSCPAAEDM GTVVPDTCEE LKRSLGEEDG ANPFTQVLEE RQRLWLAELK 301 350 ENSTTRP00000014926/1-530 RLYVEQLHEV TQKAERSERN LQLQLFMAQQ EQRRLRKELR AQQGLG---- bmy_13652T0/1-530 RLYVEQLHEV TQKAERSERN LQLQLFMAQQ EQRRLRKELR AQQGLG---- BACU002890/1-530 RLYVEQLHEV TQKAERSERN LQLQLFMAQQ EQRRLRKELR AQQGLG---- ENSP00000274605/1-544 RLYVERLHEV TQKAERSERN LQLQLFMAQQ EQRRLRKELR AQQGLAPEPR ENSBTAP00000008355/1-543 RLYLERLHEV TQKAERSERN LQLQLFMAQQ DQRRLRKELR AQQGLVPEPR 351 400 ENSTTRP00000014926/1-530 -----PEADP SARSEEEARW EVCQKTAEIS LLKQQLREAQ AELAQKLAEI bmy_13652T0/1-530 -----PEADP SARPEEEARW EVCQKTAEIS LLKHQLREAQ AELAQKLAEI BACU002890/1-530 -----PEADP SARPEEEARW EVCQKTAEIS LLKQQLREAQ AELAQKLAEI ENSP00000274605/1-544 APGTLPEADP SARPEEEARW EVCQKTAEIS LLKQQLREAQ AELAQKLAEI ENSBTAP00000008355/1-543 PPGSLPETDP SARAEEEARW EVCQKTAEIS LLKQQLREAQ AELAQKLAEI 401 450 ENSTTRP00000014926/1-530 FSLKTQLRGS RVQAQAQDAE LAQLREAVRS LQEQAPREEA PGSCETDDCK bmy_13652T0/1-530 FSLKTQLRGS RVHAQAQDAE LAQLREAVRS LQEQAPREEA PGSCETDDCK BACU002890/1-530 FSLKTQLRGS RVHAQAQDAE LAQLREAVRS LQEQAPREEA PGSCETDDCK ENSP00000274605/1-544 FSLKTQLRGS RAQAQAQDAE LVRLREAVRS LQEQAPREEA PGSCETDDCK ENSBTAP00000008355/1-543 FSLKTQLRGS RAQAQAQDAE LARLREAVRS LQEQAPREEA PGSCETDDCK 451 500 ENSTTRP00000014926/1-530 SRGLLGEAGG SEAGDGAEQL RAELLKERLR GQEQALRFEQ ERRIWQEEKE bmy_13652T0/1-530 SRGLLGEAGG SEAGDGAEQL RAELLKERLR GQEQALRFEQ ERRIWQEEKE BACU002890/1-530 SRGLLGEAGG SEAGDGAEQL RAELLKEQLR GQEQALRFEQ ERRIWQEEKE ENSP00000274605/1-544 SRGLLGEAGG SEARDSAEQL RAELLQERLR GQEQALRFEQ ERRTWQEEKE ENSBTAP00000008355/1-543 SRGLLGEAGG GEARDGAEQL RAELLQERLR GQEQALRFEQ ERRTWQEEKE 501 550 ENSTTRP00000014926/1-530 RVLRYQREIQ GGYMDMYHRN QVLEQELRAL REPLAPWSPR LESSKI bmy_13652T0/1-530 RVLRYQREIQ GGYMDMYRRN QALEQELRAL QEPLAPWSPR LESSKI BACU002890/1-530 RVLRYQREIQ GGYMDMYRRN QALEQELQAL REPLAPWSPR LESSKI ENSP00000274605/1-544 RVLRYQREIQ GGYMDMYRRN QALEQELRAL REPPTPWSPR LESSKI ENSBTAP00000008355/1-543 RVLRYQREIQ GGYMDMYRRN QVLEQELRVL REPPAPWSPR LESSKI