KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:02 2014 Check: 00 .. Name: ENSTTRP00000002676/1-349 Len: 369 Check: 3914 Weight: 1.00 Name: bmy_12933T0/1-369 Len: 369 Check: 5258 Weight: 1.00 Name: BACU014306/1-273 Len: 369 Check: 2515 Weight: 1.00 Name: ENSP00000356954/1-349 Len: 369 Check: 1216 Weight: 1.00 Name: ENSBTAP00000008357/1-349 Len: 369 Check: 1290 Weight: 1.00 // 1 50 ENSTTRP00000002676/1-349 ---------- ---------- MSAAXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_12933T0/1-369 MSKKNQQRAV RNDENATKDS FGQNQLSSSI CEKWLNGEIF PDPASGQDCG BACU014306/1-273 ---------- ---------- ---------- ---MFLVEI- ------QRAG ENSP00000356954/1-349 ---------- ---------- MTAASMGPVR VAFVVLLALC SRPAVGQNCS ENSBTAP00000008357/1-349 ---------- ---------- MSATGLGPVR CAFVLLLALC SRPASSQDCS 51 100 ENSTTRP00000002676/1-349 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_12933T0/1-369 GRCQCAAGPA PRCPAGVSLV LDSCGCCRVC AKQLGELCTE RDPCDPHKGL BACU014306/1-273 NHQQCGSGK- ---------- ---------- ---------- ---------- ENSP00000356954/1-349 GPCRCPDEPA PRCPAGVSLV LDGCGCCRVC AKQLGELCTE RDPCDPHKGL ENSBTAP00000008357/1-349 APCQCPAGPA PRCPAGVSLV LDGCGCCRVC AKQLSELCTE RDPCDPHKGL 101 150 ENSTTRP00000002676/1-349 XXXXXXXXXX XXXXXXXKDG APCVFGGAVY RNGESFQSSC KYQCTCLDGA bmy_12933T0/1-369 FCDFGSPANR KIGVCTAKDG APCVFGGTVY RSGESFQSSC KYQCTCLDGA BACU014306/1-273 ---------- -----TSKDG APCVFGGTVY RSGESFQSSC KYQCTCLDGA ENSP00000356954/1-349 FCHFGSPANR KIGVCTAKDG APCIFGGTVY RSGESFQSSC KYQCTCLDGA ENSBTAP00000008357/1-349 FCDFGSPANR KIGVCTAKDG APCVFGGTVY QSGESFQSSC KYQCTCLDGS 151 200 ENSTTRP00000002676/1-349 VDCVPLCSMD VRLPSTDCPF PRRVKLPGKC CEEWVCDEPK DHTVVSPALA bmy_12933T0/1-369 VGCVPLCSMD VRLPSPDCPF PRRVKLPGKC CEEWVCDEPK DHTVVGPALA BACU014306/1-273 VGCVPLCSMD VRLPSPDCPF PRRVKLPGKC CEEWVCDEPK DHTVVGPALA ENSP00000356954/1-349 VGCMPLCSMD VRLPSPDCPF PRRVKLPGKC CEEWVCDEPK DQTVVGPALA ENSBTAP00000008357/1-349 VGCVPLCSVD VRLPSPDCPF PRRVKLPGKC CEEWVCDEPK EHTVVGPALA 201 250 ENSTTRP00000002676/1-349 AYRLEDTYGP DPTMIRANCL VQTTEWSACS KTCGMGISTR VTNDNAFCRL bmy_12933T0/1-369 AYRLEDTFGP DPTMIRANCL VQTTEWSACS KTCGMGISTR VTNDNAFCRL BACU014306/1-273 AYRLEDTFGP DPTMIRANCL VQTTEWSACS KTCGMGISTR VTNDNAFCRL ENSP00000356954/1-349 AYRLEDTFGP DPTMIRANCL VQTTEWSACS KTCGMGISTR VTNDNASCRL ENSBTAP00000008357/1-349 AYRPEDTFGP DPTMIRANCL VQTTEWSACS KTCGMGISTR VTNDNAFCRL 251 300 ENSTTRP00000002676/1-349 EKQSRLCMVR PCEADLEENI KKGKKCIRTP KISKPVKFEL SGCTSVKTFR bmy_12933T0/1-369 EKQSRLCMVR PCEADLEENI KKGKKCIRTP KISKPVKFEL SGCTSVKTFR BACU014306/1-273 EKQSRLCMVR PCEADLEENI KKGKKCIRTP KISKPVKFEL SGCTSVKTFR ENSP00000356954/1-349 EKQSRLCMVR PCEADLEENI KKGKKCIRTP KISKPIKFEL SGCTSMKTYR ENSBTAP00000008357/1-349 EKQSRLCMVR PCEADLEENI KKGKKCIRTP KISKPIKFEL SGCTSMKTYR 301 350 ENSTTRP00000002676/1-349 AKFCGVCTDG RCCTPHRTAT LPVEFKCPDG EVMKKSMMFI KTCACHYNCP bmy_12933T0/1-369 AKFCGVCTDG RCCTPHRTAT LPVEFKCPDG EVMKKSMMFI KTCACHYNCP BACU014306/1-273 AKFCGVCTDG RCCTPHRTAT LPVEFKCPDG EVMKKSMMFI KTCACHYNCP ENSP00000356954/1-349 AKFCGVCTDG RCCTPHRTTT LPVEFKCPDG EVMKKNMMFI KTCACHYNCP ENSBTAP00000008357/1-349 AKFCGVCTDG RCCTPHRTTT LPVEFKCPDG EVMKKSMMFI KTCACHYNCP 351 400 ENSTTRP00000002676/1-349 GDNDIFESLY YRKMYGDMA bmy_12933T0/1-369 GDNDIFESLY YRKMYGDMA BACU014306/1-273 GDNDIFESLY YRKMYGDMA ENSP00000356954/1-349 GDNDIFESLY YRKMYGDMA ENSBTAP00000008357/1-349 GDNDIFESLY YRKMYGDMA