KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:35:03 2014 Check: 00 .. Name: ENSP00000370671/1-505 Len: 525 Check: 8934 Weight: 1.00 Name: ENSBTAP00000008359/1-525 Len: 525 Check: 2803 Weight: 1.00 Name: bmy_08044T0/1-500 Len: 525 Check: 798 Weight: 1.00 Name: ENSTTRP00000011828/1-339 Len: 525 Check: 6231 Weight: 1.00 // 1 50 ENSP00000370671/1-505 ---------- ---------M SAEEMVQIRL EDRCYPVSKR KLIEQSDYFR ENSBTAP00000008359/1-525 AGGERAELAG APAAPGPPAM SADEMVQIRL EDRCYPVSKR KLIEQSDYFR bmy_08044T0/1-500 ---------- ---------- ----MVQIRL EDRCYPVSKR KLIEQSDYFR ENSTTRP00000011828/1-339 ---------- ---------- ---------- -----P---- ---------- 51 100 ENSP00000370671/1-505 ALYRSGMREA LSQEAGGPEV QQLRGLSAPG LRLVLDFINA GGAREGWLLG ENSBTAP00000008359/1-525 ALYRSGMREA LSPEAGGPEV QQLRGLSAPG LRLVLDFINA GGAREGWLLG bmy_08044T0/1-500 ALYRSGMREA RSPEAGGPEV QQLRGISAPG LRLVLDFINA GGAREGWLLG ENSTTRP00000011828/1-339 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000370671/1-505 PRGEKGGGV- DEDEEMDEVS LLSELVEAAS FLQVTSLLQL LLSQVRLNNC ENSBTAP00000008359/1-525 RRGEPGGGAE EEEEDMDEAS LLSELVEAAS FLQVTSLLQL LLSQVRLTNC bmy_08044T0/1-500 RRGEPGGVG- DGEEDMDEVS LLSELVEAAS FLQVTSLLQL LLSQVRLTNC ENSTTRP00000011828/1-339 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000370671/1-505 LEMYRLAQVY GLPDLQEACL RFMVVHFHEV LCKPQFHLLG SPPQAPGDVS ENSBTAP00000008359/1-525 LELYRLAQVY GLPDLQEACL RFMAVHFHEV LCKPQFHLLG SSPPAPGDVS bmy_08044T0/1-500 LELYRLAQVY GLPDLQEACL RFMAVHFHEV LCKPQFHHLG SSPQAPGDVS ENSTTRP00000011828/1-339 ---------- ---------- ---------- -------LLG FSPQAPGDVS 201 250 ENSP00000370671/1-505 LKQRLREARM TGTPVLVALG DFLGGPLAPH PYQGEPPSML RYEEMTERWF ENSBTAP00000008359/1-525 LKQRLREARM TGTPVLVALG DFLGGPLAPH PYQGEPPSML RYEEMTERWF bmy_08044T0/1-500 LKQRLREARM TGTPVLVALG DFLGGPLAPH PYQGEPPSML RYEEMTERWF ENSTTRP00000011828/1-339 LKQRLREARM TGTPVLVALG NFLGGPLAPH PYQGEPPSML RYEEMTERWF 251 300 ENSP00000370671/1-505 PLANNLPPDL VNVRGYGSAI LDNYLFIVGG YRITSQEISA AHSYNPSTNE ENSBTAP00000008359/1-525 PLANNLPPDL VNVRGYGAAI LDNYLFIVGG YRITSQEISA AHSYNPSTNE bmy_08044T0/1-500 PLANNLPPDL VNVRGYGSAI LDNYLFIVGG YRITSQEISA AHSYNPSTNE ENSTTRP00000011828/1-339 PLANNLPPDL VNVRGYGSAI LDNYLFIVGG YRITSQEISA AHSYNPSTNE 301 350 ENSP00000370671/1-505 WLQVASMNQK RSNFKLVAVN SKLYAIGGQA VSNVECYNPE QDAWNFVAPL ENSBTAP00000008359/1-525 WLQVASMNQK RSNFKLVAVN FKLYAIGGQA VSNVECYNPE QDAWNFVAPL bmy_08044T0/1-500 WLQVASMNQK RSNFKLVAVN SKLYAIGGQA VSNVECYSPE QDAWNFVSPL ENSTTRP00000011828/1-339 WLQVASMNQK RSNFKLVAVN SKLYAIGGQA VSNVECYSPE QDAWNFVAPL 351 400 ENSP00000370671/1-505 PNPLAEFSAC ECKGKIYVIG GYTTRDRNMN ILQYCPSSDM WTLFETCDVH ENSBTAP00000008359/1-525 PNPLAEFSAC ECKGKIYVIG GYTTRDRNLN ILQYCPSADL WTLFETCDVH bmy_08044T0/1-500 PNPLAEFSAC ECKGRIYVIG GYTTRDRNLN ILQYCPSADT WTLFETCDVH ENSTTRP00000011828/1-339 PNPLAEFSAC ECKGNIYVIG GYTTRDRNLN ILRYCPSADT WTLFETCDVH 401 450 ENSP00000370671/1-505 IRKQQMVSVE ETIYIVGGCL HELGPNRRSS QSEDMLTVQS YNTVTRQWLY ENSBTAP00000008359/1-525 IRKQQMVSVE ETIYIVGGCL HELGPTRRGS QSEDMLTVQS YNTATRQWLY bmy_08044T0/1-500 IRKQQMVSVE ETIYLVGGCL HELGPTRRGS QSEDMLTVQS YNTVSRQWLY ENSTTRP00000011828/1-339 IRKQQMVSVE ETIYIVGGCL HELGPTRRGS QSEDMLTVQS YNTVTRQWLY 451 500 ENSP00000370671/1-505 LKENTSKSGL NLTCALHNDG IYIMSRDVTL STSLEHRVFL KYNIFSDSWE ENSBTAP00000008359/1-525 LKENTSKSGL NLTCALHNDG IYIMSRDVTL STSLEHRVFL KYNIFSDSWE bmy_08044T0/1-500 LKENTSKSGL NLTCALHNDG IYIMSRDVTL STSLEHRVFL KYNIFSDSWE ENSTTRP00000011828/1-339 LKENTSKSGL NLTCALHNDG IYIMSRDVTL STSLEHRVFL KYNIFSDSWE 501 550 ENSP00000370671/1-505 AFRRFPAFGH NLLVSSLYLP NKAET ENSBTAP00000008359/1-525 AFRRFPAFGH NLLVSSLYLP NKTET bmy_08044T0/1-500 AFRRFPAFGH NLLVSSLYLP NKAET ENSTTRP00000011828/1-339 AFRRFPAFGH NLLVSSLYLP NKAET