KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:35:03 2014  Check: 00 ..

 Name: bmy_13006T0/1-202         Len:    204  Check:  5474  Weight:  1.00
 Name: ENSP00000357238/1-125     Len:    204  Check:  1537  Weight:  1.00
 Name: ENSTTRP00000001325/1-126  Len:    204  Check:  412  Weight:  1.00
 Name: ENSBTAP00000008361/1-125  Len:    204  Check:  9947  Weight:  1.00

//


                          1                                                   50
bmy_13006T0/1-202         MTAHVYQLQG WVLGLRLSIN TAGTTPVGVR TEQRSSHPTN RR--AKEEGN 
ENSP00000357238/1-125     ---------- ---------- ---------- MERHTSHP-N RKVPAKEEAN 
ENSTTRP00000001325/1-126  ---------- ---------- ---------- MEQRSSHPTN RRVPAKEEGN 
ENSBTAP00000008361/1-125  ---------- ---------- ---------- MEQLPSHPTN RR--AKEEGN 


                          51                                                 100
bmy_13006T0/1-202         AVPLCQDKPS PSVIHLQASS PSATFLKIPA TKLPSGIDHK PKEYLGLLEC 
ENSP00000357238/1-125     AVPLCRAKPS PSYINLQASS PPATFLNIQT TKLPSV-DHK PKECLGLLEC 
ENSTTRP00000001325/1-126  AVPLCRAKPT PSFINLQASS PPATCLKIPA TKLSSA-DHK PKECLGLLEC 
ENSBTAP00000008361/1-125  AVPLCRAKPS PSFINLQASS PPVTLLKILP TKLPSGINHK PKECLGLLEC 


                          101                                                150
bmy_13006T0/1-202         MCANLQLQAQ LAQPQMAILE NLQAPMTQLS PGRESKNSSL PALSRNLLKE 
ENSP00000357238/1-125     MYANLQLQTQ LAQQQMAVLE HLQASVTQLA PGRGSNNSSL PALSPNPLLN 
ENSTTRP00000001325/1-126  MYASLQLETQ LAQQRMAIFE NLQASMTQLA PGRESQNSSL PTLSCNLLLN 
ENSBTAP00000008361/1-125  MYANLQLQTQ LAQQQMAILE NLQASMTQLA PGKENKNSSL PALSRNLLLS 


                          151                                                200
bmy_13006T0/1-202         EQKERRIYLP PICPEMKFIR NFLSLRNNIW NPFIFLSKSL EKMDGNYEKA 
ENSP00000357238/1-125     -------HLP QFSK------ ---------- ---------- ---------- 
ENSTTRP00000001325/1-126  -------HLP QFSK------ ---------- ---------- ---------- 
ENSBTAP00000008361/1-125  -------HLP QFSK------ ---------- ---------- ---------- 


                          201                                                250
bmy_13006T0/1-202         PKVK 
ENSP00000357238/1-125     ---- 
ENSTTRP00000001325/1-126  ---- 
ENSBTAP00000008361/1-125  ----