KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:04 2014 Check: 00 .. Name: ENSBTAP00000008362/1-393 Len: 599 Check: 4104 Weight: 1.00 Name: ENSP00000420875/1-393 Len: 599 Check: 1665 Weight: 1.00 Name: BACU002891/1-466 Len: 599 Check: 1175 Weight: 1.00 Name: ENSTTRP00000014933/1-432 Len: 599 Check: 7128 Weight: 1.00 Name: bmy_13651T0/1-560 Len: 599 Check: 8780 Weight: 1.00 // 1 50 ENSBTAP00000008362/1-393 ---------- ---------- ---------- ---------- ---------- ENSP00000420875/1-393 ---------- ---------- ---------- ---------- ---------- BACU002891/1-466 MQSRGRAGGL GLPKEP---- ----PRSPPT VGDVGQDREL DPHILRGPSG ENSTTRP00000014933/1-432 ---------- ---------- ---------- ---------- ---------- bmy_13651T0/1-560 PRVGESGASE ELPQLPVPLT ATPETRARAA GPDVGQDREL DPHILRGPSG 51 100 ENSBTAP00000008362/1-393 ---------- ---------- ---------- -MEQCASVER EVDKVLQKFL ENSP00000420875/1-393 ---------- ---------- ---------- -MEQCACVER ELDKVLQKFL BACU002891/1-466 SRPYLGSSSN SHVPSYCDPA EPEVGPDTVA AMEQCASVER EVDKVLQKFL ENSTTRP00000014933/1-432 ---------- ---------- ---------- -MEQCASVER EVDKVLQKFL bmy_13651T0/1-560 SRPYLGSRSN SHVPSYCDPA EPEVGPDTVA AMEQCASVER EVDKVLQKFL 101 150 ENSBTAP00000008362/1-393 TYGQHCEQSL EELLHYVGQL RAELASTAVQ GTPLSATLSL VMSQCCRKIK ENSP00000420875/1-393 TYGQHCERSL EELLHYVGQL RAELASAALQ GTPLSATLSL VMSQCCRKIK BACU002891/1-466 TYGQHCEQSL EELLHYVGQL RAELASAALQ GTPLSATLSL VMSQCCRKIK ENSTTRP00000014933/1-432 TYGQHCEQSL EELLHYVGQL RAELASAALQ GTPLSATLSL VMSQCCRKIK bmy_13651T0/1-560 TYGQHCEQSL EELLHYVGQL RAELASAALQ GTPLSATLSL VMSQCCRKIK 151 200 ENSBTAP00000008362/1-393 DTVQKLASDH KDIHSSVSRV GKAIDR---- ---------- ---------- ENSP00000420875/1-393 DTVQKLASDH KDIHSSVSRV GKAIDR---- ---------- ---------- BACU002891/1-466 DTVQKLASDH KDIHSSVSRV GKAIDR---- ---------- ---------- ENSTTRP00000014933/1-432 DTVQKLASDH KDIHSSVSRV GKAIDRVSIW VAPDWGWEPA ASVQGFSGSQ bmy_13651T0/1-560 DTVQKLASDH KDIHSSVSRV GKAIDR---- ---------- ---------- 201 250 ENSBTAP00000008362/1-393 ---------- -----NFDSE ICGVVSDAVW DSREKQQQTL QMAILEHLYQ ENSP00000420875/1-393 ---------- -----NFDSE ICGVVSDAVW DAREQQQQIL QMAIVEHLYQ BACU002891/1-466 ---------- -----NFDSE ICGVVSDAVW DSREKQQQIL QMAILEHLYQ ENSTTRP00000014933/1-432 CEKCLSHRAL SLIRQNFDSE ICGVVSDAVW DSREKQQQIL QMAILEHLYQ bmy_13651T0/1-560 ---------- -----NFDSE ICGVVSDAVW DSREKQQQIL QMAILEHLYQ 251 300 ENSBTAP00000008362/1-393 QGMLSVAEEL CQESTLNVDL DFKQPFLELN RILEALHEQD LGPALEWAVS ENSP00000420875/1-393 QGMLSVAEEL CQESTLNVDL DFKQPFLELN RILEALHEQD LGPALEWAVS BACU002891/1-466 QGMLSVAEEL CQESTLNVDL DFKQPFLELN RILEALHEQD LGPALEWAVS ENSTTRP00000014933/1-432 QGMLSVAEEL CQESTLNVDL DFKQPFLELN RILEALHEQD LGPALEWAVS bmy_13651T0/1-560 QGMLSVAEEL CQESTLNVDL DFKQPFLELN RILEALHEQD LGPALEWAVS 301 350 ENSBTAP00000008362/1-393 HRQRLLELNS SLEFKLHRLQ FIRLLAGGPE KQLEALSYAR HFQPFAHVHQ ENSP00000420875/1-393 HRQRLLELNS SLEFKLHRLH FIRLLAGGPA KQLEALSYAR HFQPFARLHQ BACU002891/1-466 HRQRLLELNS SLEFKLHRLH FIRLLAGGPE KQLEALSYAR HFQPFARLHQ ENSTTRP00000014933/1-432 HRQRLLELNS SLEFKLHRLH FIRLLAGGPE KQLEALSYAR HFQPFARLHQ bmy_13651T0/1-560 HRQRLLELNS SLEFKLHRLH FIRLLAGGPE KQLEALSYAR HFQPFARLHQ 351 400 ENSBTAP00000008362/1-393 R--------- ---------- ---------- ---------- ---------- ENSP00000420875/1-393 R--------- ---------- ---------- ---------- ---------- BACU002891/1-466 R--------- ---------- ---------- ---------- ---------- ENSTTRP00000014933/1-432 R--------- ---------- ---------- ---------- ---------- bmy_13651T0/1-560 RGTCPECQGG HCWALVDIST SGIARPCPTW GCVLPEPLPH CRPGLGPGSH 401 450 ENSBTAP00000008362/1-393 ---------- ---------- ---------- -------EIQ VMMGSLVYLQ ENSP00000420875/1-393 ---------- ---------- ---------- -------EIQ VMMGSLVYLR BACU002891/1-466 ---------- ---------- ---------- -------EIQ VMMGSLVYLR ENSTTRP00000014933/1-432 ---------- ---------- ---------- -------EIQ VMMGSLVYLR bmy_13651T0/1-560 GAQPAPHTAS AALPPQGWTR SPGKRLPPCT LIPPCLVEIQ VMMGSLVYLR 451 500 ENSBTAP00000008362/1-393 LGLEKSPYCH LLDNSHWAEI CETFTRDACS LLGLSVESPL SVSFASGCVA ENSP00000420875/1-393 LGLEKSPYCH LLDSSHWAEI CETFTRDACS LLGLSVESPL SVSFASGCVA BACU002891/1-466 LGLEKSPYCH LLDNSHWAEI CETFTRDACS LLGLSVESPL SVSFASGCVA ENSTTRP00000014933/1-432 LGLEKSPYCH LLDNSHWAEI CETFTRDACS LLGLSVESPL SVSFASGCVA bmy_13651T0/1-560 LGLEKSPYCH LLDNSHWAEI CETFTRDACS LLGLSVESPL SVSFASGCVA 501 550 ENSBTAP00000008362/1-393 LPVLMNIKAV MEQRQCSGVW SHKDELPIEI ELGMKCWYHS VFACPILRQQ ENSP00000420875/1-393 LPVLMNIKAV IEQRQCTGVW NHKDELPIEI ELGMKCWYHS VFACPILRQQ BACU002891/1-466 LPVLMNIKAV IEQRQCTGVW SHKDELPIEI ELGMKCWYHS VFACPILRQQ ENSTTRP00000014933/1-432 LPVLMNIKAV IEQRQCTGVW SHKDELPIEI ELGMKCWYHS VFACPILRQQ bmy_13651T0/1-560 LPVLMNIKAV IEQRQCTGVW SHKDELPIEI ELGMKCWYHS VFACPILRQQ 551 600 ENSBTAP00000008362/1-393 TSDSNPPIKL ICGHVISRDA LNKLINGGKL KCPYCPMEQN PADGKRIIF ENSP00000420875/1-393 TSDSNPPIKL ICGHVISRDA LNKLINGGKL KCPYCPMEQN PADGKRIIF BACU002891/1-466 TSDSNPPIKL ICGHVISRDA LNKLINGGKL KCPYCPMEQN PADGKRIIF ENSTTRP00000014933/1-432 TSDSNPPIKL ICGHVISRDA LNKLINGGKL KCPYCPMEQN PADGKRIIF bmy_13651T0/1-560 TSDSNPPIKL ICGHVISRDA LNKLINGGKL KCPYCPMEQN PADGKRIIF