KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:35:07 2014 Check: 00 .. Name: ENSBTAP00000008396/1-468 Len: 580 Check: 7578 Weight: 1.00 Name: ENSTTRP00000008772/1-562 Len: 580 Check: 4796 Weight: 1.00 Name: bmy_05249T0/1-576 Len: 580 Check: 6968 Weight: 1.00 Name: BACU018116/1-563 Len: 580 Check: 8132 Weight: 1.00 // 1 50 ENSBTAP00000008396/1-468 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008772/1-562 MADSYSRDSE PTTRTLLRRV LDTADPRTPR RPRSARTDVQ RALLQTPSSR bmy_05249T0/1-576 MADSYSRDSE PTTRTLLRRV LDTADPRTPR RPRSARTDVQ RALLQTPSSR BACU018116/1-563 MADSYSRDSE PTTRTLLRRV LDTADPRTPR RPRSARTDVQ RALLQTPSSR 51 100 ENSBTAP00000008396/1-468 ---------- ---------- ---------- ---------- -------APE ENSTTRP00000008772/1-562 RLRSQTKTTA RRCSNRARSV DRLAHVQASG HLEEQTPRTL LKNILLTAPE bmy_05249T0/1-576 RLRSQTKMTA RRCSHRARSI DRLAHVQASG HLEEQTPRTL LKNILLTAPE BACU018116/1-563 RLRSQTKMTA RRCSHRARST DRLAHVQASG HLEEQTPRTL LKNILLTAPE 101 150 ENSBTAP00000008396/1-468 SSIVMPEAVV KLVPSPQVVQ PSRRKSSRGS LELQLPELEP PTTLAPGLLA ENSTTRP00000008772/1-562 SSILMPESVV KPVLAPQVVQ ASRRESGRGS LELQLPELEP PTTLAPGLLA bmy_05249T0/1-576 SSILMPESVV KPVPAPQVVL ASRRESGRGS LELQLPELEP PTTLAPGLLA BACU018116/1-563 SSILMPESVV KPVPAPQVVQ ASRRESGRGS LELQLPELEP PTTLAPGLLA 151 200 ENSBTAP00000008396/1-468 PGRRKQRLRL SEFQQGMDWG -HLSQEPREN ADASSLTSSL NLTFAMPLQP ENSTTRP00000008772/1-562 LGRRKQRLRL SVFQQGVDLG LPPSQEPHGN ADASSLTSSL NLTFATPLQT bmy_05249T0/1-576 LGRRKQRLRL SVFQQGVDLG LPPSQEPHGN ADASSLTSSL NLTFAIPLQP BACU018116/1-563 LGRRKQRLRL SVFQQGVDLG LPPSQEPHGN ADASSLTSSL NLTFATPLQP 201 250 ENSBTAP00000008396/1-468 QSVKRPGLAR RPPTRRVVDV GTFLQDLRDT SLTVAPP--- ---------- ENSTTRP00000008772/1-562 QSVKRPGLAR RPPTRRAVDV GTLLQDLRDT SLALAPP--- ---------- bmy_05249T0/1-576 QSVKRPGLAR RPPTRRAVDV GTLLQDLRDT SLALAPPDES LKTPVATLPT BACU018116/1-563 QSVKRPGLAR RPPTRRAVDV GTFLQDLRDT SLALAPP--- ---------- 251 300 ENSBTAP00000008396/1-468 DTVLEDTQPF SQPLAGHSPS VHHSLPCPSP SGAKEVEGAA SRRTRSSGPG ENSTTRP00000008772/1-562 DTVLEDTQPF SQPLVGRSPS VHHSLPCRSH SGAKDVERAA SRRTWSSGLG bmy_05249T0/1-576 DTVLEDTQPF SQPLVGRSPS VHHSLPCPSH SGAKDVERAA SRRTWSSGLG BACU018116/1-563 DTVLEDTQPF SQPLVGRSPS VHHSLPCPSH SGAKDVERAA SRRTWSSGLG 301 350 ENSBTAP00000008396/1-468 LQNSYSGPGK PAQLLARKME EVEAIAMGLP N-TSSVSGED GIEPLQNGVG ENSTTRP00000008772/1-562 LQN--NGAGK AAQLLAGKVE EVDALAMGFP NISSNISGED GVEPLQNGVG bmy_05249T0/1-576 LQN--NGAGK PAQLLAGKVE EVGALAMGFP NISSNISGED GVEPLQNGVG BACU018116/1-563 LQN--NGAGK PAQLLAGKVE EVGALAMGFP NISSNISGED GIEPLQNGVG 351 400 ENSBTAP00000008396/1-468 EEAEESMEES MSVREVEKAA EEQGSARAEE PEGHTEVAAA AGSLGAIEAK ENSTTRP00000008772/1-562 EEAEERMEES L--REVEKAA EAQGSARAEE LEGHIEVTEA EGSWGAVEAK bmy_05249T0/1-576 EEAEERMEES L--REVEKAA EAQGSARAEE PEGHIEVTEA EGSWGAVEAK BACU018116/1-563 EEAEERMEES L--REVEKAA EAQGSARAEE PEGHIEMTEA EGSWGAVEAK 401 450 ENSBTAP00000008396/1-468 EPEGSSEDED TSGRLASPEL PPSTPEFLRT RRLQFPEPAP PPSTAVLPSE ENSTTRP00000008772/1-562 EPEGSSGDED TSGRTASPEL ASSTPEFLRA RRLQFLEPAP PPSTAVLPSE bmy_05249T0/1-576 EPEGSSGDED TSGRTASPEL ASSTPEFLRA RRLQFLETAP PPSTAVLPSE BACU018116/1-563 EPEGSSGDED TSGRTASPEL ASSTPEFLRA RRLQILETAP PPSTAVLPSE 451 500 ENSBTAP00000008396/1-468 LPKHLSARIP PRPRIPGSRP RQDPNKAGLN HYAKLFSFYA KMPMEKKAEE ENSTTRP00000008772/1-562 PPEPLLARLP PKPRIPGSRP RQDPYKTGLN HYAKLFSFYA -MPMEKKALE bmy_05249T0/1-576 PPEPLSAGLS PKPRIPGSRP RQDPYKTGLN HYAKLFSFYA KMPMEKKAVE BACU018116/1-563 PPEPLSARLP PKPRIPGSRP RQDPYKTGLD HYAKLFSFYA KMPMEKKAVE 501 550 ENSBTAP00000008396/1-468 MVEKCLDKYF QHLCNDLEVF AAHAGRKTVR PEDLELLLRR QGLVTDQVSL ENSTTRP00000008772/1-562 MVEKCLDKYF QHLCDDLEVF AAHAGRKTVR PEDLELLMRR QGLVSDQVSL bmy_05249T0/1-576 MVEKCLDKYF QHLCDDLEVF AAHAGRKTVR PEDLELLMRR QGLVTDQVSL BACU018116/1-563 MVEKCLDKYF QHLCDDLEVF AAHAGRKTVR PEDLELLMRR QGLVTDQVSL 551 600 ENSBTAP00000008396/1-468 HVLVERHLPL EYRQLLIPCA FSGNSVFPSQ ENSTTRP00000008772/1-562 HVLVERHLPL EYRQQLIPCA FSGNTVFPAQ bmy_05249T0/1-576 HVLVERHLPL EYRQQLIPCA FSGNTVFPAQ BACU018116/1-563 HVLVERHLPL EYRQQLIPCA FSGNTVFPAQ