KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:35:08 2014 Check: 00 .. Name: ENSP00000304689/1-314 Len: 314 Check: 1262 Weight: 1.00 Name: bmy_05247T0/1-305 Len: 314 Check: 5183 Weight: 1.00 Name: ENSBTAP00000008406/1-303 Len: 314 Check: 3412 Weight: 1.00 Name: BACU018117/1-223 Len: 314 Check: 633 Weight: 1.00 // 1 50 ENSP00000304689/1-314 MPGFTCCVPG CYNNSHRDKA LHFYTFPKDA ELRRLWLKNV SRAGVSGCFS bmy_05247T0/1-305 MPGFTCCVPG CYNNSHRDKA LHFYTFPKDA ELRRLWLKNV SRAGVSGCFS ENSBTAP00000008406/1-303 MPGFTCCVPG CYNNSHRDKA LHFYTFPKDA ELRRLWLKNV SRAGVSGCFS BACU018117/1-223 MPGFTCCVPG CYNNSHRDEA LHFYTFPKDA ELRRLWLKNV SRGGISGCFS 51 100 ENSP00000304689/1-314 TFQPTTGHRL CSVHFQGGRK TYTVRVPTIF PLRGVNERKV ARRPAGAAAA bmy_05247T0/1-305 TFQPTTGHRL CSVHFQGGRK TYTVRVPTIF PLRGVNERKV ARRPAGAAAA ENSBTAP00000008406/1-303 TFQPTTGHRL CSVHFQGGRK TYTVRVPTIF PLRGVNERKV ARRPAGAAAA BACU018117/1-223 TFQPTTGHRL CSVHFQGGRK TYT------- ---------- ---------- 101 150 ENSP00000304689/1-314 RRRQQQQQQQ QQQQQQQQQQ QQQQQQQQQQ QQSSPSASTA QTAQLQPNLV bmy_05247T0/1-305 RRR------- --QQQQQQQQ QQQQQQQQQQ QQPSPSASTA QTAQLQPNLV ENSBTAP00000008406/1-303 RRR------- ----QQQQQQ QQQQQQQQQQ QQPSPSASTA QTTQLQPNLV BACU018117/1-223 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000304689/1-314 SASAAVLLTL QATVDSSQAP GSVQPAPITP TGEDVKPIDL TVQVEFAAAE bmy_05247T0/1-305 SASAAVLLTL QAAVDSSQAP GSVPPAPTTP TGEDVKPIDL TVQVEFAAAE ENSBTAP00000008406/1-303 SASAAVLLTL QAAVDSSQAP GTVPPVPTTP TGEDVKPIDL TVQVEFAAAE BACU018117/1-223 ---------- -AAVDSSQAP GSVPPAPTTP TGEDVKPLDL TVQVEFAAAE 201 250 ENSP00000304689/1-314 GAAAAAAASE LQAATAGLEA AECPMGPQLV VVGEEGFPDT GSDHSYSLSS bmy_05247T0/1-305 GAAAAAAASE LEAATAGLEA AECPMGPQLV VVGEEGFPDT GSDHSYSLSS ENSBTAP00000008406/1-303 GAAAAAAASE LEAATAGLEA AECPMGPQLV VVGEEGFPDT GSDHSYSLSS BACU018117/1-223 G---AAAASE LEAATAGLEA AKCPMGPQLV VVGEEGFPDT GSDHSYSLSS 251 300 ENSP00000304689/1-314 GTTEEELLRK LNEQRDILAL MEVKMKEMKG SIRHLRLTEA KLREELREKD bmy_05247T0/1-305 GTTEEELLRK LNEQRDILAL MEVKMKEMKG SIRHLRLTEA KLREELREKD ENSBTAP00000008406/1-303 GTTEEELLRK LNEQRDILAL MEVKMKEMKG SIRHLRLTEA KLREELREKD BACU018117/1-223 GTTEEELLRK LNEQRDILAL MEVKMKEMKG SIRHLRLTEA KLREELREKD 301 350 ENSP00000304689/1-314 RLLAMAVIRK KHGM bmy_05247T0/1-305 RLLAMAVIRK KHGM ENSBTAP00000008406/1-303 RLLAMAVIRK KHGM BACU018117/1-223 RLLAMAVIRK KHGM