KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:35:08 2014 Check: 00 .. Name: ENSP00000256544/1-304 Len: 314 Check: 7059 Weight: 1.00 Name: ENSBTAP00000008409/1-304 Len: 314 Check: 376 Weight: 1.00 Name: bmy_18107T0/1-284 Len: 314 Check: 2153 Weight: 1.00 Name: ENSTTRP00000006846/1-303 Len: 314 Check: 4921 Weight: 1.00 // 1 50 ENSP00000256544/1-304 MASETHNVKK RNFCNKIEDH FIDLPRKKIS NFTNKNMKEV KKSPKQLAAY ENSBTAP00000008409/1-304 MASETHNVKK RNFCNHTEDH SIDLPRKRIS NFTNKNMKEV KKSPKQLATY bmy_18107T0/1-284 MASETHNVKK RSFCNNIEDH FIDVPRKRIS NFTNKNMKEV KKSPKQLAAY ENSTTRP00000006846/1-303 MASETHNVKK RNFCNNIEDH FIDVPRKRVS NFTNKNMKEV KKSPKQLAAY 51 100 ENSP00000256544/1-304 INRTVGQTVK SPDKLRKVIY RRKKVHHPFP NPCYRKKQSP GSGGCDMANK ENSBTAP00000008409/1-304 ITRTVGQAVK SPDKLRKVIY RRKKVHHPIQ NPCYRKKQSP KSGGCVMANK bmy_18107T0/1-284 ITRTVGQAVK SPDKLRKVIY HRKKVHHPFQ NPCHRKKQSP NSGGCDMANK ENSTTRP00000006846/1-303 ITRTVGQAVK SPDKLRKVIY HRKKVHHPFQ NPCYRKKQSP NSGGCDMANK 101 150 ENSP00000256544/1-304 ENELACAGHL PEKLHHDSRT YLVNSSDSGS SQTESPSSKY SGFFSEVSQD ENSBTAP00000008409/1-304 ENELACAGHL PEKLRHDSRT YLINTSDSGS SQTESPSSKY SGFFSEVSQD bmy_18107T0/1-284 ENELACAGRL PEQMRQGSRP YLVSPSDSGS SQTESPSSKY SGFFSEVSQD ENSTTRP00000006846/1-303 ENELACAGRL PEQVRQGSRP YLVSPSDSGS SQTESPSSKY SGFFSEXXXX 151 200 ENSP00000256544/1-304 HETMAQVLFS RNMRLNVALT FWRKRSISEL VAYLLRIEDL GVVVDCLPVL ENSBTAP00000008409/1-304 HETMAQVLFS RNLRLNVALT FWRKRSISEL VAYLVRIEDL GVVVDCLPVL bmy_18107T0/1-284 HETMTQVLFS RNLRLNVALT FWRKRSISEL VAYLVRIEDL GVVVDCLPVL ENSTTRP00000006846/1-303 XXXXXXXXFS RNLR-NVALT FWRKRSISEL VAYLVRIEDL GVVVDCLPVL 201 250 ENSP00000256544/1-304 TNCLQEEKQY ISLGCCVDLL PLVKSLLKSK FEEYVIVGLN WLQAVIKRWW ENSBTAP00000008409/1-304 TNSLQEEKQY ISLGCCVDLL PLVKSLLKSR FEEYIIVGLN WLQAVIKRWW bmy_18107T0/1-284 TNSLQEEKQY ISLGCCVDLL PLVKSLLKSK FEE------- ---------- ENSTTRP00000006846/1-303 TNSLQEEKQY ISLGCCVDLL PLVKSLLKSK FEEYIIVGLN WLQAVIKRWW 251 300 ENSP00000256544/1-304 SELSSKTEII NDGNIQILKQ QLSGLWEQEN HLTLVPGYTG NIAK--DVDA ENSBTAP00000008409/1-304 SELSSKTEIM NDGNIQILKQ QLSGLWEQEN HLTLVPGYTG NIAK--DVDA bmy_18107T0/1-284 ---------- ---NIQILKQ QLSGLWEQEN HLTLVPGYTG NIAKVLDLAK ENSTTRP00000006846/1-303 SELSSKTEII NDGNIQILKQ QLSGLWEQEN HLTLVPGYTG NIAK--DVDA 301 350 ENSP00000256544/1-304 YLLQLH---- ---- ENSBTAP00000008409/1-304 YLLQLH---- ---- bmy_18107T0/1-284 TVVTLWIYTK AQKS ENSTTRP00000006846/1-303 YLLQLH---- ----