KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:13 2014 Check: 00 .. Name: ENSP00000253024/1-835 Len: 892 Check: 1034 Weight: 1.00 Name: ENSBTAP00000008424/1-814 Len: 892 Check: 535 Weight: 1.00 Name: BACU005932/1-731 Len: 892 Check: 4147 Weight: 1.00 Name: bmy_21431T0/1-758 Len: 892 Check: 4733 Weight: 1.00 Name: ENSTTRP00000001873/1-720 Len: 892 Check: 8008 Weight: 1.00 // 1 50 ENSP00000253024/1-835 MAASAAAASA AAASAASGSP GPGEGSAGGE KRSTAPSAAA SASASAAASS ENSBTAP00000008424/1-814 -MAASAAAAS AAAAAASGSP GPSEGSAGAE KRAAASSAAG SASGSAAASA BACU005932/1-731 ---------- ---------- ---------- ---------- ---------- bmy_21431T0/1-758 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001873/1-720 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000253024/1-835 PAGGGAEALE LLEHCGVCRE RLRPEREPRL LPCLHSACSA CLGPAAPAAA ENSBTAP00000008424/1-814 SASSPAGGGG XSRIRMGRLF QVRPRKG--- ---------- -------LIA BACU005932/1-731 ---------- ---------- ---------- ---------- ---------- bmy_21431T0/1-758 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001873/1-720 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000253024/1-835 NSSGDGGAAG DGTVVDCPVC KQQCFSKDIV ENYFMRDSGS KAATDAQDAN ENSBTAP00000008424/1-814 SPGAEGWLSM GWKVVDCPVC KQQCFSKDIV ENYFMRDCGG KAATDSQDAN BACU005932/1-731 ----MGTRRV AGTVVDCPVC KQQCFSKDIV ENYFMRDSGS KAATDSQDAN bmy_21431T0/1-758 ---------- ---------- ---------- ----MRDSGS KAATDSQDAN ENSTTRP00000001873/1-720 ---------- ----VDCPVC KQQCFSKDIV ENYFMRDSGS KAATDSQDAN 151 200 ENSP00000253024/1-835 -QCCTSCEDN APATSYCVEC SEPLCETCVE AHQRVKYTKD HTVRSTGPAK ENSBTAP00000008424/1-814 QQCCTSCEDN APATSYCVEC SEPLCETCVE AHQRVKYTKD HTVRSTGPAK BACU005932/1-731 QQCCTSCEDN APATSYCVEC SEPLCETCVE AHQRVKYTKD HTVRSTGPAK bmy_21431T0/1-758 QQCCTSCEDN APATSYCVEC SEPLCETCVE AHQRVKYTKD HTVRSTGPAK ENSTTRP00000001873/1-720 -QCCTSCEDN APATSYCVEC SEPLCETCVE AHQRVKYTKD HTVRSTGPAK 201 250 ENSP00000253024/1-835 SRDGERTVYC NVHKHEPLVL FCESCDTLTC RDCQLNAHKD HQYQFLEDAV ENSBTAP00000008424/1-814 SRDGERTVYC NVHKHEPLVL FCESCDTLTC RDCQLNAHKD HQYQFLEDAV BACU005932/1-731 SRDGERTVYC NVHKHEPLVL FCESCDTLTC RDCQLNAHKD HQYQFLEDAV bmy_21431T0/1-758 SRDGERTVYC NVHKHEPLVL FCESCDTLTC RDCQLNAHKD HQYQFLEDAV ENSTTRP00000001873/1-720 SRDGERTVYC NVHKHEPLVL FCESCDTLTC RDCQLNAHKD HQYQFLEDAV 251 300 ENSP00000253024/1-835 RNQRKLLASL VKRLGDKHAT LQKSTKEVRS SIRQVSDVQK RVQVDVKMAI ENSBTAP00000008424/1-814 RNQRKLLASL VKRLGDKHAT LQKNTKEVRS SIRQVSDVQK RVQVDVKMAI BACU005932/1-731 RNQRKLLASL VKRLGDKHAT LQKNTKEVRS SIRQVSDVQK RVQVDVKMAI bmy_21431T0/1-758 RNQRKLLASL VKRLGDKHAT LQKNTKEVRS SIRQVSDVQK RVQVDVKMAI ENSTTRP00000001873/1-720 RNQRKLLASL VKRLGDKHAT LQK-TKEVRS SIRQVSDVQK RVQVDVKMAI 301 350 ENSP00000253024/1-835 LQIMKELNKR GRVLVNDAQK VTEGQQERLE RQHWTMTKIQ KHQEHILRFA ENSBTAP00000008424/1-814 LQIMKELNKR GRVLVNDAQK VTEGQQERLE RQHWTMTKIQ KHQEHILRFA BACU005932/1-731 LQIMKELNKR GRVLVNDAQK VTEGQQERLE RQHWTMTKIQ KHQEHILRFA bmy_21431T0/1-758 LQIMKELNKR GRVLVNDAQK VTEGQQERLE RQHWTMTKIQ KHQEHILRFA ENSTTRP00000001873/1-720 LQIMKELNKR GRVLVNDAQK VTEGQQERLE RQHWTMTKIQ KHQEHILRFA 351 400 ENSP00000253024/1-835 SWALESDNNT ALLLSKKLIY FQLHRALKMI VDPVEPHGEM KFQWDLNAWT ENSBTAP00000008424/1-814 SWALESDNNT ALLLSKKLIY FQLHRALKMI VDPVEPHGEM KFQWDLNAWT BACU005932/1-731 SWALESDNNT ALLLSKKLIY FQLHRALKMI VDPVEPHGEM KFQWDLNAWT bmy_21431T0/1-758 SWALESDNNT ALLLSKKLIY FQLHRALKMI VDPVEPHGEM KFQWDLNAWT ENSTTRP00000001873/1-720 SWALESDNNT ALLLSKKLIY FQLHRALKMI VDPVEPHGEM KFQWDLNAWT 401 450 ENSP00000253024/1-835 KSAEAFGKIV AERPGTNSTG PAPMAPPRAP GPLSKQGSGS S--------- ENSBTAP00000008424/1-814 KSAEAFGKIV AERPGTNSTG PAPMAPPRAP GPLGKQGSGS S--------- BACU005932/1-731 KSAEAFGKIV AERPGTNSTG PAPMAPPRAP GPLSKQGSGS S--------- bmy_21431T0/1-758 KSAEAFGKIV AERPGTNSTG PAPMAPPRAP GPLSKQGSGS SQVSQGGDHS ENSTTRP00000001873/1-720 KSAEAFGKIV AERPGTNSTG PVPMAPPRAP GPLSKQGSGS S--------- 451 500 ENSP00000253024/1-835 ---------- ---------- -QPMEVQEGY GFGSGDDPYS SAEPHVSGVK ENSBTAP00000008424/1-814 ---------- ---------- -QPMEVQEGY GFGS-DDPYS SAEPHVSGVK BACU005932/1-731 ---------- ---------- -QPMEVQEGY GFGS-DDPYS SAEPHVSGVK bmy_21431T0/1-758 GRKEARGPVG CLSTEVHLLC PQPMEVQEGY GFGSADDPYS SAEPHVSGVK ENSTTRP00000001873/1-720 ---------- ---------- -QPMEVQEGY GFGSADDPYS SAEPHVSGVK 501 550 ENSP00000253024/1-835 RSRSGEGEVS GLMRKVPRVS LERLDLDLTA DSQPPVFKVF PGSTTEDYNL ENSBTAP00000008424/1-814 RPRSGDGEVS GLMRKVPRVS LERLDLDLTA DSQPPVFKVF PGNTTEDYNL BACU005932/1-731 RSRSSDGEVS GLMRKVPRVS LERLDLDLTA DSQPPVFKVF PGSTTEDYNL bmy_21431T0/1-758 RSRSSDGEVS GLMRKVPRVS LERLDLDLTA DSQPPVFKVF PGSTTEDYNL ENSTTRP00000001873/1-720 RSRSSDGEVS GLMRKVPRVS LERLDLDLTA DSQPPVFKVF PGSTTEDYNL 551 600 ENSP00000253024/1-835 IVIERGAAAA ATGQPGTAPA GTPGAPPLAG MAIVKEEETE AAIGAPPTAT ENSBTAP00000008424/1-814 IVIERGAAAA AAGQPGTAPS GVPGAPPLPG MAIVKEEETE AAIGAPPAAT BACU005932/1-731 IVIERGAAAV AAGQPGTAPP GAPGAPPLPG MAIVKEEETE AAIGAPPAAT bmy_21431T0/1-758 IVIERGAAAV AAGQPGTAPP GAPGAPPLPG MAIVKEEETE AAIGAPPAAT ENSTTRP00000001873/1-720 IVIERGAAAV AAGQPGTAPP GAPGAPPLPG MAIVKEEETE AAIGAPPAAT 601 650 ENSP00000253024/1-835 EGPETKPVLM ALAEGPGAEG PRLASPSGST SSGLEVVAPE GTSAPGGGPG ENSBTAP00000008424/1-814 EGPETKPVLM ALGEGPGAEG PRLASPSGST SSGLEVVAPE GTSVPAGGPG BACU005932/1-731 EGPETKPVLM ALAEGPGAQG PRLASPSGST SSGLEVVAPE GASAPAGGPG bmy_21431T0/1-758 EGPETKPVLM ALAEGPGAEG PRLASPSGST SSGLEVVAPE GTSAPAGGPG ENSTTRP00000001873/1-720 EGPETKPVLM ALAEGPGAEG PRLASPSGST SSGLEVVAPE GTSAPAGGPG 651 700 ENSP00000253024/1-835 TLDDSATICR VCQKPGDLVM CNQCEFCFHL DCHLPALQDV PG-------- ENSBTAP00000008424/1-814 SLDDSATICR VCQKPGDLVM CNQCEFCFHL DCHLPALQDV PG-------- BACU005932/1-731 ALDDSATICR VCQKPGDLVM CNQCEFCFHL DCHLPALQDV PG-------- bmy_21431T0/1-758 ALDDSATICR VCQKPGDLVM CNQCEFCFHL DCHLPALQDV PGCEAVRGLQ ENSTTRP00000001873/1-720 ALDDSATICR VCQKPGDLVM CNQCEFCFHL DCHLPALQDV PG-------- 701 750 ENSP00000253024/1-835 ---------- --------EE WSCSLCHVLP DLKEEDGSLS LDGADSTGVV ENSBTAP00000008424/1-814 ---------- --------EE WSCSLCHVLP DLKEEDGSLN LDGGDSTGVV BACU005932/1-731 ---------- --------EE WSCSLCHVLP DLKEEDGSLN LDGGDSTGVV bmy_21431T0/1-758 GGGLGQVPCS PSRSVPSREE WSCSLCHVLP DLKEEDGSLN LDGGDSTGVV ENSTTRP00000001873/1-720 ---------- --------EE WSCSLCHVLP DLKEEDGSLN LDGGDSTGVV 751 800 ENSP00000253024/1-835 AKLSPANQRK CERVLLALFC HEPCRPLHQL ATDSTFSLDQ PGGTLDLTLI ENSBTAP00000008424/1-814 AKLSPANQQK CERVLLALFC HEPCRPLHQL ATDSTFSPDQ PGDTLDLTLI BACU005932/1-731 AKLSPANQQK CERVLLALFC HEPCRPLHQL ATDSTFSLDQ PGGTLDLTLI bmy_21431T0/1-758 AKLSPANQQK CERVLLALFC HEPCRPLHQL ATDSTFSLDQ PGGTLDLTLI ENSTTRP00000001873/1-720 AKLSPANQQK CERVLLALFC HEPCRPLHQL ATDSTFSLDQ PGGTLDLTLI 801 850 ENSP00000253024/1-835 RARLQEKLSP PYSSPQEFAQ DVGRMFKQFN KLTEDKADVQ SIIGLQRFFE ENSBTAP00000008424/1-814 RARLQEKLSP PYSSPQEFAQ DVGRMFKQFN KLTEDKADVQ SIIGLQRFFE BACU005932/1-731 RARLQEKLSP PYSSPQEFAQ DVGRMFKQFN KLTEDKADVQ SIIGLQRFFE bmy_21431T0/1-758 RARLQEKLSP PYSSPQEFAQ DVGRMFKQFN KLTEDKADVQ SIIGLQRFFE ENSTTRP00000001873/1-720 RARLQEKLSP PYSSPQEFAQ DVGRMFKQFN KLTEDKADVQ SIIGLQRFFE 851 900 ENSP00000253024/1-835 TRMNEAFGDT KFSAVLVEPP PMSLPGAGLS SQELSGGPGD GP ENSBTAP00000008424/1-814 TRMNEAFGDT KFSAVLVEPP PLSLPGAGLS AQDLSTGPGE GP BACU005932/1-731 TRMNEAFGDT KFSAVLVEPP PLSLPGAALS TQDLSSGPGD GP bmy_21431T0/1-758 TRMNEAFGDT KFSAVLVEPP PLSLPGAGLS AQDLSSGPGD GP ENSTTRP00000001873/1-720 TRMNEAFGDT KFSAVLVEPP PLSLPGAGLS AQDLSSGPGD GP