KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:35:25 2014  Check: 00 ..

 Name: ENSP00000307199/1-102    Len:    102  Check:  28  Weight:  1.00
 Name: bmy_00709T0/1-102        Len:    102  Check:  9375  Weight:  1.00
 Name: BACU011970/1-102         Len:    102  Check:  8936  Weight:  1.00
 Name: ENSBTAP00000008467/1-78  Len:    102  Check:  6976  Weight:  1.00

//


                         1                                                   50
ENSP00000307199/1-102    MALLKANKDL ISAGLKEFSV LLNQQVFNDP LVSEEDMVTV VEDWMNFYIN 
bmy_00709T0/1-102        MALLQTNKAL IATGIKEFNI LLNQQVFSDP AVPEEAMVTV VNDWVNFYIN 
BACU011970/1-102         MALLQTNKDL IATGIKEFNI LLNQQVFSDP AVPEEAMVTV VNDWVNFYIN 
ENSBTAP00000008467/1-78  ---------- ---------- ----QVFSDP AISEEAMVTV VNDWVSFYIN 


                         51                                                 100
ENSP00000307199/1-102    YYRQQVTGEP QERDKALQEL RQELNTLANP FLAKYRDFLK SHELPSHPPP 
bmy_00709T0/1-102        YYRQQMVGEQ QEQDKAVQGL RQELDTLSAS FLDKYRNFLK SLGAPDHRLP 
BACU011970/1-102         YYRQQMVGEQ QEQDKAVQEL RQELDTLSAS FLDKYRNFLK FLGAPDHRLP 
ENSBTAP00000008467/1-78  YYKKQLSGEQ DEQDKALQEF RQELNTLSAS FLDKYRNFLK SSTLPSHPPR 


                         101                                                150
ENSP00000307199/1-102    SS 
bmy_00709T0/1-102        SS 
BACU011970/1-102         SS 
ENSBTAP00000008467/1-78  YT