KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:25 2014 Check: 00 .. Name: ENSBTAP00000008473/1-456 Len: 456 Check: 7915 Weight: 1.00 Name: ENSP00000335304/1-453 Len: 456 Check: 9392 Weight: 1.00 Name: ENSTTRP00000001797/1-455 Len: 456 Check: 756 Weight: 1.00 Name: bmy_10168T0/1-440 Len: 456 Check: 2298 Weight: 1.00 Name: BACU010815/1-406 Len: 456 Check: 8641 Weight: 1.00 // 1 50 ENSBTAP00000008473/1-456 MLSRSRCASR AFSRSLSAFQ KGNCPLVRRS LPGISLCQGP GYPDSRKTVI ENSP00000335304/1-453 MLSRSRCVSR AFSRSLSAFQ KGNCPLGRRS LPGVSLCQGP GYPNSRKVVI ENSTTRP00000001797/1-455 MLSRSRFLSR AFSRSLSAFQ KGNCPLGRRS LPGISLCQGP GYPDSRKTVI bmy_10168T0/1-440 CLLS------ ---------Q QGNCPLGRRS LPGISLCQGP GYPDSRKIVF BACU010815/1-406 ---------- ---------- ---------- ---------- ---------I 51 100 ENSBTAP00000008473/1-456 NSSNIFSVRF FRTTAVCKDD VITVKTPAFA ESVTEGDVRW EKAVGDTVAE ENSP00000335304/1-453 N-NSVFSVRF FRTTAVCKDD LVTVKTPAFA ESVTEGDVRW EKAVGDTVAE ENSTTRP00000001797/1-455 NSGSVFSVRF FRTTAVCKDD VITVNTPAFA ESVTEGDVRW EKAVGDTVAE bmy_10168T0/1-440 NSNSDFSVRF FRTTAVCKDD VITVKTPAFA ESVTEGDVRW EKAVGDTVAE BACU010815/1-406 NSNSDFSVRF FRTTAVCKDD VITVKTPAFA ESVTEGDVRW EKAVGDTVAE 101 150 ENSBTAP00000008473/1-456 DEVVCEIETD KTSVQVPSPA NGVIEALLVP DGGKVEGGTP LFTLRKTGAA ENSP00000335304/1-453 DEVVCEIETD KTSVQVPSPA NGVIEALLVP DGGKVEGGTP LFTLRKTGAA ENSTTRP00000001797/1-455 DEVVCEIETD KTSVQVPSPA NGMIEALLVP DGGKVEGGTP LFTLRKTGAV bmy_10168T0/1-440 DEVVCEIETD KTSVQVPSPA NGMIEALLVP DGGKVEGGTP LFTLRKTGAA BACU010815/1-406 DEVVCEIETD KTSVQVPSPA NGMIEALLVP DGGKVEGGTP LFTLRKTGAA 151 200 ENSBTAP00000008473/1-456 PAKAKPAAAP AAAAPKAEPT VSAVPPPPAA PIPTQMPPVP SPSQPLTSKP ENSP00000335304/1-453 PAKAKPAEAP AAAAPKAEPT AAAV-PPPAA PIPTQMPPVP SPSQPPSGKP ENSTTRP00000001797/1-455 PAKARPAEAP AAAAPKAEPA ASAVPPPPAA SIPTQMPPVP SPSQPLTSKP bmy_10168T0/1-440 PAKAKPAEAP AAAAPKAEPA ASAVPPPPAA SIPTQMPPVP SPSQPLTSKP BACU010815/1-406 PAKAKPAEAP AATAPKAEPA ASAVPPPPAA SIPTQMPPVP SPSQPLTSKP 201 250 ENSBTAP00000008473/1-456 VSAVKPTAAP PRAEAGAGVG LRSEHREKMN RMRQRIAQRL KEAQNTCAML ENSP00000335304/1-453 VSAVKPTVAP PLAEPGAGKG LRSEHREKMN RMRQRIAQRL KEAQNTCAML ENSTTRP00000001797/1-455 VSAIKPTAAP PVAEPGAGTG LRSEHREKMN RMRQRIAQRL KEAQNTCAML bmy_10168T0/1-440 VSAVKPTAAP PVAEPGAGTG LRSEHREKMN RMRQRIAQRL KEAQNTCAML BACU010815/1-406 VSAVKPTAAP PVAEPGAGTG LRSEHRERMN RMRQRIAQRL KEAQNTCAML 251 300 ENSBTAP00000008473/1-456 TTFNEIDMRK IQKVRSRHKD EFLWKRFSSL YFLMSIRPKF LAIDLLSQAS ENSP00000335304/1-453 TTFNEIDMSN IQEMRARHKE AFLKKHNLKL GF-MSAFVKA SAFALQEQPV ENSTTRP00000001797/1-455 TTFNEIDMSN IQEMRSRHRD AFLKKHNLKL GF-MSAFVKA SAFALQEQPV bmy_10168T0/1-440 TTFNEIDMSN IQEMRARHKD AFLKKHNLKL GF-MSAFVKA SAFALQEQPV BACU010815/1-406 TTFNEIDMSN IQEMRARHKD AFLKKHNLKL GF-MSAFVKA SAFALQEQPV 301 350 ENSBTAP00000008473/1-456 ILKVIDDATK EVVYRDYIDI SVAVATPRGL VVPVIRNVET MNYADIERTI ENSP00000335304/1-453 VNAVIDDTTK EVVYRDYIDI SVAVATPRGL VVPVIRNVEA MNFADIERTI ENSTTRP00000001797/1-455 VNAVIDDTTK EVVYRDYIDI SVAVATPRGL VVPVIRNVET MNYADIERTI bmy_10168T0/1-440 VNAVIDDTTK EVVYRDYIDI SVAVATPRGL VVPVIRNVET MNYADIERTI BACU010815/1-406 VNAVIDDTTK EVVYRDYIDI SVAVATPRGL VVPVIRNVET MNYADIERTI 351 400 ENSBTAP00000008473/1-456 SELGEKARKN ELAIEDMDGG TFTISNGGVF GSLFGTPIIN PPQSAILGMH ENSP00000335304/1-453 TELGEKARKN ELAIEDMDGG TFTISNGGVF GSLFGTPIIN PPQSAILGMH ENSTTRP00000001797/1-455 SELGEKARKN ELAIEDMDGG TFTISNGGVF GSLFGTPIIN PPQSAILGMH bmy_10168T0/1-440 GELGEKARKN ELAIEDMDGG TFTISNGGVF GSLFGTPIIN PPQSAILGMH BACU010815/1-406 GELGEKARKN ELAIEDMDGG TFTISNGGVF GSLFGTPIIN PPQSAILGMH 401 450 ENSBTAP00000008473/1-456 AIVDRPVVIG GKVEVRPMMY VALTYDHRLI DGREAVTFLR KIKAAVEDPR ENSP00000335304/1-453 GIFDRPVAIG GKVEVRPMMY VALTYDHRLI DGREAVTFLR KIKAAVEDPR ENSTTRP00000001797/1-455 AIFDRPVVVG GKVEVRPMMY VALTYDHRLI DGREAVTFLR KIKAAVEDPR bmy_10168T0/1-440 AIFDRPVVVG GKVEVRPMMY VALTYDHRLI DGREAVTFLR KIKAAVEDPR BACU010815/1-406 AIFDRPVVVG GKVEVRPMMY VALTYDHRLI DGREAVTFLR KIKAAVEDPR 451 500 ENSBTAP00000008473/1-456 VLLLDL ENSP00000335304/1-453 VLLLDL ENSTTRP00000001797/1-455 VLLLDL bmy_10168T0/1-440 VLLLDL BACU010815/1-406 VLLLDL