KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:35:25 2014 Check: 00 .. Name: ENSBTAP00000008477/1-634 Len: 684 Check: 7426 Weight: 1.00 Name: ENSTTRP00000004510/1-652 Len: 684 Check: 1961 Weight: 1.00 Name: bmy_01144T0/1-636 Len: 684 Check: 5166 Weight: 1.00 Name: BACU000843/1-668 Len: 684 Check: 7032 Weight: 1.00 // 1 50 ENSBTAP00000008477/1-634 MEPAMEPETL EARI------ ---------- ---------- ------NRAT ENSTTRP00000004510/1-652 MEPAMEPETL EARI------ ---------- ---------- ------NRAT bmy_01144T0/1-636 MEPAMEPETL EARI------ ---------- ---------- ------NRAT BACU000843/1-668 MEPAMEPETL EARISLGRTD QHRVTLGDRL SRGDEDPALA APRLTLDRAT 51 100 ENSBTAP00000008477/1-634 NPLNKELNWA SINGFCEQLN EDFEGPPLAT RLLAHKIQSP QEWEAVQAL- ENSTTRP00000004510/1-652 NPLNKELHWA SINGFCEQLN EDFEGPPLAT RLLAHKIQSP QEWEAIQALT bmy_01144T0/1-636 NPLNKELHWA SINGFCEQLN EDFEGPPLAT RLLAHKIQSP QEWEAIQAL- BACU000843/1-668 NPLNKELHWA SINGFCEQLN EDFEGPPLAT RLLAHKIQSP QEWEAIQAL- 101 150 ENSBTAP00000008477/1-634 ---------- -----TVLET CMKSCGKRFH DEVGKFRFLN ELIKVVSPKY ENSTTRP00000004510/1-652 VRRRGSTICP LPCGGTVLET CMKSCGKRFH DEVGKFRFLN ELIKVVSPKY bmy_01144T0/1-636 ---------- -----TVLET CMKSCGKRFH DEVGKFRFLN ELIKVVSPKY BACU000843/1-668 ---------- -----TVLET CMKSCGKRFH DEVGKFRFLN ELIKVVSPKY 151 200 ENSBTAP00000008477/1-634 LGSRTSEKVK NKILELLYSW TVGLPEEVKI AEAYQMLKKQ GIVKADPKLP ENSTTRP00000004510/1-652 LGSRTSEKVK NKILELLYSW TVGLPEEVKI AEAYQMLKKQ GIVKADPKLP bmy_01144T0/1-636 LGSRTSEKVK NKILELLYSW TVGLPEEVKI AEAYQMLKKQ GIVKADPKLP BACU000843/1-668 LGSRTSEKVK NKILELLYSW TVGLPEEVKI AEAYQMLKKQ GIVKADPKLP 201 250 ENSBTAP00000008477/1-634 DDATFPVPPP RPKNVIFEDE EKSKMLARLL KSSHPEDLRA ANKLIKEMVQ ENSTTRP00000004510/1-652 DDATFPLPPP RPKNVIFEDE EKSKMLARLL KSSHPEDLRA ANKLIKEMVQ bmy_01144T0/1-636 DDATFPLPPP RPKNVIFEDE EKSKMLARLL KSSHPEDLRA ANKLIKEMVQ BACU000843/1-668 DDATFPLPPP RPKNVIFEDE EKSKMLARLL KSSHPEDLRA ANKLIKEMVQ 251 300 ENSBTAP00000008477/1-634 EDQKRMEKIS KRASAIEEVN NNVKLLTEMV MNHSQGGAAA RSSEDLMKEL ENSTTRP00000004510/1-652 EDQKRMEKIS KRVSAIEEVN NNVKLLTEMV MNHSQGGAAA QSSEDLMKEL bmy_01144T0/1-636 EDQKRMEKIS KRVSAIEEVN NNVKLLTEMV MNHSQGGAAA QSSEDLMKEL BACU000843/1-668 EDQKRMEKIS KRVSAIEEVN NNVKLLTEMV MNHSQGGTAA QSSEELMKEL 301 350 ENSBTAP00000008477/1-634 YQRCERMRPT LFRLASDTED NDEALAEILQ ANDNLTQVIN LYKQLVRGEE ENSTTRP00000004510/1-652 YQRCERLRPT LFRLASDTED NDEALAEILQ ANDNLTQVIN LYKQLVRGEE bmy_01144T0/1-636 YQRCERLRPT LFRLASDTED NDEALAEILQ ANDNLTQVIN LYKQLVRGEE BACU000843/1-668 YQRCERLRPT LFRLASDTED NDEALAEILQ ANDNLTQVIN LYKQLVRGEE 351 400 ENSBTAP00000008477/1-634 VNGEATAASI PGSTSALLDL SGLDLPPTGA TYPAVPTRPG DQASPEQPST ENSTTRP00000004510/1-652 VNGDATAASI PGSTSALLDL SGLDLPPVGT TDPATPTHPG DQASLEQPST bmy_01144T0/1-636 VNGDATAACI PGSTSALLDL SGLDLPPVAT TDPATPTCPG DQASLEQPST BACU000843/1-668 VNGDATAACI PGSTSALLDL SGLDLPPVGT TDPATPTCPG DQASLEQPST 401 450 ENSBTAP00000008477/1-634 SVSLLDDELM SLGLSDPTPL S--GLDGAGW NSFQSSDSTE APAPTPAPSV ENSTTRP00000004510/1-652 SASLLDDELM SLGLGDPTPP SGPGLDGAGW NSFQSSDGTE PPHPAPAPNV bmy_01144T0/1-636 SVSLLDDELM SLGLSDPTPP SGPGLDGAGW NSFQSSDGTE PPHPTPAPSV BACU000843/1-668 SVSLLDDELM SLGLSDPTPP SGPGLDGAGW NSFQSSDGTE PPHPTPAPSV 451 500 ENSBTAP00000008477/1-634 DIRPPAQTPP PASSGLDDLD LLGKTLLQQS LPPESQQVRW EKQQPAPRLT ENSTTRP00000004510/1-652 DSRPPAQTSL PTSSGLDDLD LLGKTLLQQS LPPESQQVRW EKQQPAPRLT bmy_01144T0/1-636 DSRPPAQTSL PTSSGLDDLD LLGKTLLQQS LPPESQQVRW EKQQPAPRLT BACU000843/1-668 DSRPPAQTSL PTSSGLDDLD LLGKTLLQQS LPPESQQVRW EKQQPAPRLT 501 550 ENSBTAP00000008477/1-634 LRDLQNKSSC SLPSSSATGL LHTVSPEPPG PPQQPTPTEV SLANITVPLE ENSTTRP00000004510/1-652 LRDLQNKSSC SVSSSGATSL LHAVSPEAPG PLQQPTPTEL SLANITVPLE bmy_01144T0/1-636 LRDLQNKSSC SLSSSGATSL LHTMSPEPPG PLQQPTPTEL SLANITVPLE BACU000843/1-668 LRDLQNKSSC SLSSSGATSL LHTVSPEPPG PLQQPTPTEL SLANITVPLE 551 600 ENSBTAP00000008477/1-634 SIKPSSILPV TVYDQHGFRV LFHFARDPLP GRSDVLVVVV SMLSTAPQPI ENSTTRP00000004510/1-652 SIKPSSILPV TVYDQHGFRV LFHFARDPLP GRSDVLVVVV SMLSTAPQPI bmy_01144T0/1-636 SIKPSSILPV TVYDQHGFRV LFHFARDPLP GRSDVLVVVV SMLSTAPQPI BACU000843/1-668 SIKPSSILPV TVYDQHGFRV LFHFARDPLP GRSDVLVVVV SMLSTAPQPI 601 650 ENSBTAP00000008477/1-634 RNIVFQSAVP KVMKVKLQPP SGTELPAFNP IVHPSAITQV LLLANPQKEK ENSTTRP00000004510/1-652 RNIVFQSAVP KIMKVKLQPP SGTELPAFNP IVHPSAITQV LLLANPQKEK bmy_01144T0/1-636 RNIVFQSAVP KVMKVKLQPP SGTELPAFNP IVHPSAITQV LLLANPQKEK BACU000843/1-668 RNIVFQSAVP KVMKVKLQPP SGTELPAFNP IVHPSAITQV LLLANPQKEK 651 700 ENSBTAP00000008477/1-634 VRLRYKLLFT MGDQTYNEMG DVDQFPPPET WGSL ENSTTRP00000004510/1-652 VRLRYKLLFT MGDQTYNEMG DVDQFPPPET WGSL bmy_01144T0/1-636 VRLRYKLLFT MGDQTYNEMG DVDQFPPPET WGSL BACU000843/1-668 VRLRYKLLFT MGDQTYNEMG DVDQFPPPET WGSL