KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:27 2014 Check: 00 .. Name: ENSTTRP00000010569/1-1225 Len: 1251 Check: 4502 Weight: 1.00 Name: bmy_10945T0/1-970 Len: 1251 Check: 1384 Weight: 1.00 Name: BACU019792/1-1229 Len: 1251 Check: 289 Weight: 1.00 Name: ENSP00000267890/1-1244 Len: 1251 Check: 7568 Weight: 1.00 Name: ENSBTAP00000008483/1-1243 Len: 1251 Check: 1541 Weight: 1.00 // 1 50 ENSTTRP00000010569/1-1225 MESIEEDWGW --------GL WRNLRCLGHA YQGKCCTEGG ISSTTKTSSE bmy_10945T0/1-970 ---------- ---------- ---------- LLASVFD--- ---------- BACU019792/1-1229 --AVEEDWGW --------GL WRNLRCLGHA YQGKCCTEGG ISSTTKTSSE ENSP00000267890/1-1244 MSGGGEQLDI LSVGILVKER WKVLRKIGGG GFGEIYDALD MLTRENVALK ENSBTAP00000008483/1-1243 MSGGGEQPDI LSVGILVKER WKVLRKIGGG GFGEIYDALD MLTRENVALK 51 100 ENSTTRP00000010569/1-1225 NGSC------ -----CIEKT TR-KDHVCRF IGCGRNDRFN YVVMQLQGRN bmy_10945T0/1-970 ---------- ---------- ----NSIKTF -GVIESDPFD W--------- BACU019792/1-1229 NGGC------ -----CIEKT TRGKDHVCRF IGCGRNDRFN YVVMQLQGRN ENSP00000267890/1-1244 VESAQQPKQV LKMEVAVLKK LQGKDHVCRF IGCGRNDRFN YVVMQLQGRN ENSBTAP00000008483/1-1243 VESAQQPKQV LKMEVAVLKK LQGKDHVCRF IGCGRNDRFN YVVMQLQGRN 101 150 ENSTTRP00000010569/1-1225 LADLRRSQSR GTFTISTTLR LGRQILESIE SIHSVGFLHR DIKPSNFAMG bmy_10945T0/1-970 ----EKTGTD GSLTTTTT-- ---------- ---------- ---------- BACU019792/1-1229 LADLRRSQSR GTFTISTTLR LGRQILESIE SIHSVGFLHR DIKPSNFAMG ENSP00000267890/1-1244 LADLRRSQSR GTFTISTTLR LGRQILESIE SIHSVGFLHR DIKPSNFAMG ENSBTAP00000008483/1-1243 LADLRRSQSR GTFTISTTLR LGRQILESIE SIHSVGFLHR DIKPSNFAMG 151 200 ENSTTRP00000010569/1-1225 RFPSTCRKCY MLDFGLARQF TNSCGDVRPP RAVAGFRGTV RYASINAHRN bmy_10945T0/1-970 ---------- ---------- ---------- ---------- ---------- BACU019792/1-1229 RFPSTCRKCY MLDFGLARQF TNSCGDVRPP RAVAGFRGTV RYASVNAHRN ENSP00000267890/1-1244 RFPSTCRKCY MLDFGLARQF TNSCGDVRPP RAVAGFRGTV RYASINAHRN ENSBTAP00000008483/1-1243 RFPSTCRKCY MLDFGLARQF TNSCGDVRPP RAVAGFRGTV RYASINAHRN 201 250 ENSTTRP00000010569/1-1225 REMGRHDDLW SLFYMLVEFV VGQLPW-KIK DKEQVGSIKE RYDHRLMLKH bmy_10945T0/1-970 ---------- ---------- ---------- ---------- ---------- BACU019792/1-1229 REMGRHDDLW SLFYMLVEFV VGQLPWRKIK DKEQVGSIKE RYDHRLMLKH ENSP00000267890/1-1244 REMGRHDDLW SLFYMLVEFV VGQLPWRKIK DKEQVGSIKE RYDHRLMLKH ENSBTAP00000008483/1-1243 REMGRHDDLW SLFYMLVEFV VGQLPWRKIK DKEQVGSIKE RYDHRLMLKH 251 300 ENSTTRP00000010569/1-1225 LPPEFSIFLD HISSLDYFTK PDYQLHIXXX XXXXXXXXXX XXXXXXXXXX bmy_10945T0/1-970 ---------- ---------- ---------- ---------- ---------- BACU019792/1-1229 LPPEFSIFLD HISSLDYFTK PDYQVII-FH NLKTKDAQIK LTVSKKRKKQ ENSP00000267890/1-1244 LPPEFSIFLD HISSLDYFTK PDYQLLTSVF DNSIKTFGVI ESDPFDWEKT ENSBTAP00000008483/1-1243 LPPEFSIFLE HISSLDYFTK PDYQLLTSVF DNSIKAFGVI ESDPFDWEKT 301 350 ENSTTRP00000010569/1-1225 XXXXXXXXXX XXXXXXXXXX XXXXXXX-XX XXXXIANATP IPGDLLRENT bmy_10945T0/1-970 ---------- -STTPQLHTR LTPA----AI G---IANATP IPGDLLRENT BACU019792/1-1229 NPKALRNISY AAASPSPATK LTEGRSIKTV GRGKIANATP IPGDLLRENT ENSP00000267890/1-1244 GNDGSLTTTT TSTTPQLHTR LTPA----AI G---IANATP IPGDLLRENT ENSBTAP00000008483/1-1243 GTDGSLTTTT TSATPQLHTR LTPA----AI G---IANATP IPGDMLRENT 351 400 ENSTTRP00000010569/1-1225 DEC--SDQLD --ENGHPVGV SPDKLPGSLG HPRPQEKDVW EEMDANRNKI bmy_10945T0/1-970 DEVFPDEQLS DGENGIPVGV SPDKLPGSLG HPRPQEKDVW EEMDTNRNKI BACU019792/1-1229 DEVFPDEQLS DGENGIPVGV SPDKLPGSLG HPRPQEKDVW EEMDTNRNKI ENSP00000267890/1-1244 DEVFPDEQLS DGENGIPVGV SPDKLPGSLG HPRPQEKDVW EEMDANKNKI ENSBTAP00000008483/1-1243 DEVFPDEQLS DGENGIPVGV SPNKVPGSLG HPHPQEKDVW EEMDTNRNKI 401 450 ENSTTRP00000010569/1-1225 KLGICKAATE EENSHGQANG ILNAPSLGSP IRVRSEITQP DRDVPLVRKL bmy_10945T0/1-970 KLGICKAATE EENSHGQANG ILNAPSLGSP IRVRSEMTQP DRDVPLVRKL BACU019792/1-1229 KLGICKAATE EENSHGQANG IVNAPSLGSP IRVRSEMTQP DRDVPLVRKL ENSP00000267890/1-1244 KLGICKAATE EENSHGQANG LLNAPSLGSP IRVRSEITQP DRDIPLVRKL ENSBTAP00000008483/1-1243 KLGICKAATE EENSHGQANG ILNAPSLGSP IRVRSEITQP DRDVPLVRKL 451 500 ENSTTRP00000010569/1-1225 RSIHSFELEK RLVLEPKPDT DKFLETCLEK MQKDSSEGKE SVLPALLHKP bmy_10945T0/1-970 RSIHSFELEK RLVLEPKPDT DKFLETCLEK MQKDSSEGKE SVLPALLHKP BACU019792/1-1229 RSIHSFELEK RLVLEPKPDT DKFLETCLEK MQKESSEGKE SVLPALLHKP ENSP00000267890/1-1244 RSIHSFELEK RLTLEPKPDT DKFLETCLEK MQKDTSAGKE SILPALLHKP ENSBTAP00000008483/1-1243 RSIHSFELEK RLALEPKPDT DKFLETCLEK MQKDPSAGKE STLPALLHKP 501 550 ENSTTRP00000010569/1-1225 CVPAVSRTDH IWHYDEEYLP DASKPASANT PEQADGGGSN GFVAVNLSSC bmy_10945T0/1-970 CVPAVSRTDH IWHYDEEYLP DASKPASANT PEQADGGGSN GFVAVNLSSC BACU019792/1-1229 CVPAVSRTDH IWHYDEEYLP DASKPASANT PEQADGGGSN GFVAVNLSSC ENSP00000267890/1-1244 CVPAVSRTDH IWHYDEEYLP DASKPASANT PEQADGGGSN GFIAVNLSSC ENSBTAP00000008483/1-1243 CVPAVSRADH IWHYDEEYLP DASKPASVNT PEQADGGGSN GFVAVNLSSC 551 600 ENSTTRP00000010569/1-1225 KQEVDSKEWV IVDKEQDLRD FRTNEALGHK TTGSPSDEEP EVLQVLEESP bmy_10945T0/1-970 KQEVDSKEWV IVDKEQDLRD FRTNEALGHK TTGSPSDEEP EVLQVLEESP BACU019792/1-1229 KQEVDSKEWV IVDKEQDLRD FRTNEALGHK TTGSPSDEEP EVLQVLEESP ENSP00000267890/1-1244 KQEIDSKEWV IVDKEQDLQD FRTNEAVGHK TTGSPSDEEP EVLQVLEASP ENSBTAP00000008483/1-1243 KQEVDSKEWV IVDKEQDLQD FRTNEALGPK TTGSPSDEEP EVLQVLEESP 601 650 ENSTTRP00000010569/1-1225 QDEKLRLGPW AENDHLKKET SGVILAVSGK CPATAASEQY ADRLELQAGA bmy_10945T0/1-970 QDEKLRLGPW AENDHLKKET SGVILAVSGK CPATAASEQY ADRLELQAGA BACU019792/1-1229 QDEKLRLGPW AENDHLKKET SGVILVVSGK CPATAASEQY ADRLELQAGA ENSP00000267890/1-1244 QDEKLQLGPW AENDHLKKET SGVVLALSAE GPPTAASEQY TDRLELQPGA ENSBTAP00000008483/1-1243 QDEKLQLGPW AENDHLKKET SGVVFVLSGE CPATAASEQY IDRLEFQAGA 651 700 ENSTTRP00000010569/1-1225 ASQFIAVTPT SPMEAQAEGP LTAITIPRRS VASTQSTSGS FHYGQLPEKK bmy_10945T0/1-970 ASQFIAVTPT SPMEAQAEGP LTAITIPRRS VASTQSTSGS FHYGQQPEKK BACU019792/1-1229 TSQFIAVTPT SPMEAQGEGP LTAITIPRRS VASTQSTSGS FHYGQQPEKK ENSP00000267890/1-1244 ASQFIAATPT SLMEAQAEGP LTAITIPRPS VASTQSTSGS FHCGQQPEKK ENSBTAP00000008483/1-1243 ASQFITVTPT SPMEAQAEGP LTAITIPRPS VASTQSTSGS FHYGQQPEKK 701 750 ENSTTRP00000010569/1-1225 DLHPMEPTVE LYSHMESFSG LVVTEREPPS GGNRTDFGLQ IDHIGHDMLP bmy_10945T0/1-970 DLHPVEPTVE LYSPRESFSG LVVTEREPPS GGSRTDFGLQ IDHIGHDMLP BACU019792/1-1229 DLHPVEPTVE LYSPRESFSG LVVTEREPPS GGSRTDFGLQ IDHIGHDMLP ENSP00000267890/1-1244 DLQPMEPTVE LYSPRENFSG LVVTEGEPPS GGSRTDLGLQ IDHIGHDMLP ENSBTAP00000008483/1-1243 DLHTIEPTVE LYSPRENFSG LVVIEGEPPS GGSRTDLGLQ IDHIGHDMLP 751 800 ENSTTRP00000010569/1-1225 SIRECDSSQD LGPKDLPDHN RLAVREFEGL PRETEEKSML VGSDNEDEKL bmy_10945T0/1-970 SIRECDSSQD LGPKDLPDHN RLAVREFEGL PRETGEKSML VGSDNEDEKL BACU019792/1-1229 SIRECDSSQD LGPKDLPDHN RLAVREFEGL PRETGEKSML VGSDNEDEKL ENSP00000267890/1-1244 NIRESNKSQD LGPKELPDHN RLVVREFENL PGETEEKSIL LESDNEDEKL ENSBTAP00000008483/1-1243 NIREYDRSQD VGPKDLPDHN RLAMREFEGL PRGLEEKSIA LGSDNEDEKL 801 850 ENSTTRP00000010569/1-1225 SKGQPYIEIS PLPGDLVTVE RDHSATTEPL DVTKTQTFSV VPNQDKTHEI bmy_10945T0/1-970 SKGQPYIEIS PLPGDLVTVE RDHSATTEPL DVTKTQTFSV VPNQDKTHEI BACU019792/1-1229 SKGQPYIEIS PLPGDLVMVE RDHSATTEPL DVTKTQTFSV VPNQDKTHEI ENSP00000267890/1-1244 SRGQHCIEIS SLPGDLVIVE KDHSATTEPL DVTKTQTFSV VPNQDKNNEI ENSBTAP00000008483/1-1243 SKGQHYIEIS PLPGDLVTME RDHSATTEPL DVTKMQTFSV VPNQDKNHEI 851 900 ENSTTRP00000010569/1-1225 VKLLAVGTSA ISPRVIDQHV EGQIGQVAAM QKGKISKEDD IKSEDLLSHQ bmy_10945T0/1-970 VKLLAVGTSA VSPRVIDRHV EGQIGQVAAA QKGKISKEDD IKSEDLLSHQ BACU019792/1-1229 VKLLAVGTSA VSPRVIDQHV EGQIGQVAAV QKGKISKEDD IKSEDLLSHQ ENSP00000267890/1-1244 MKLLTVGTSE ISSRDIDPHV EGQIGQVAEM QKNKISKDDD IMSEDLPGHQ ENSBTAP00000008483/1-1243 MKLLAVGSSE VSPRVIDPYV EEQIGQVAAM QKSKIS-EDD IKGEDLPNHS 901 950 ENSTTRP00000010569/1-1225 GDLSTFLHQE GKREKIAPRN GELFHSVSES EHCPPSRKDV VRSSFVTRHS bmy_10945T0/1-970 GDLSTLLHQE GKREKIAPRN GELFHSVSES EHCPPSRKDV VRSSFVTRHS BACU019792/1-1229 GDLSTLLHQE GKREKIAPRN GELFHSVSES EHCPPSRKDV VRSSFVTRHS ENSP00000267890/1-1244 GDLSTFLHQE GKREKITPRN GELFHCVSEN EHGAPTRKDM VRSSFVTRHS ENSBTAP00000008483/1-1243 GDLSTFLHQE GKREKIAPRK GELFNPVSES EHCPPSRKDV VRSSFVTRHS 951 1000 ENSTTRP00000010569/1-1225 RIPVLAQEID STFESSCPVS AKEKLLQKKA YQPDLVKLLV EKRQLKSFLG bmy_10945T0/1-970 RIPVLAQEID STFESSCPVS AKEKLLQKKA YQPDLVKLLV EKRQLKSFLG BACU019792/1-1229 RIPVLAQEID STFESSCPVS AKEKLLQKKA YQPDLVKLLV EKRQLKSFLG ENSP00000267890/1-1244 RIPVLAQEID STLESSSPVS AKEKLLQKKA YQPDLVKLLV EKRQFKSFLG ENSBTAP00000008483/1-1243 RIPVLAQEID STFDSSSPVS AKEKLLQKKA CQPDLVKLLV EKRQLRSLLG 1001 1050 ENSTTRP00000010569/1-1225 DLSSASDKLL EERLSTIPAP FSEEEVFTPF SRLAVDSHLS RSAEDSFLTP bmy_10945T0/1-970 DLSSASDKLL EERLSTIPAP FSEEEVFTPF SRLAVDSHLS RSAEDSFLTP BACU019792/1-1229 DLSSASDKLL EERLSTIPAP FSEEEVFTPF SRLAVDSHLS RSAEDSFLTP ENSP00000267890/1-1244 DLSSASDKLL EEKLATVPAP FCEEEVLTPF SRLTVDSHLS RSAEDSFLSP ENSBTAP00000008483/1-1243 DLSSASDKLL EERLATVPAP FSEEEVFTPF SRLAADSHLS RSAEDNFLAP 1051 1100 ENSTTRP00000010569/1-1225 IISQSRKSKI PRPVSWINTD QINSSTSSQF LPRPPPGKPP MRPGVEARLR bmy_10945T0/1-970 IISQSRKSKI PRPVSWVNTD QVNSSTSSQF LPRPPPGKPP MRPGVEARLR BACU019792/1-1229 IISQSRKSKI PRPVSWVNTD QVNSSTSSQF LPRPPPGKPP MRPGVEARLR ENSP00000267890/1-1244 IISQSRKSKI PRPVSWVNTD QVNSSTSSQF FPRPPPGKPP TRPGVEARLR ENSBTAP00000008483/1-1243 IISQSRKSKI PRPVSWVNTD QVNSSTPSQF LPRPPPGKPP MRPGVEARLR 1101 1150 ENSTTRP00000010569/1-1225 RYRVLGSSSS DSDLFSRLAQ ILQNGSQKPR STTQCKSPGS PHNPKTPPKS bmy_10945T0/1-970 RYKVLGSSNS DSDLFSRLAQ ILQNGSQKPR STTQCKSPGS PHNPKTPPKS BACU019792/1-1229 RYKVLGSSNS DSDLFSRLAQ ILQNGSQKPW STTQCKGPGS PHNPKTPPKS ENSP00000267890/1-1244 RYKVLGSSNS DSDLFSRLAQ ILQNGSQKPR STTQCKSPGS PHNPKTPPKS ENSBTAP00000008483/1-1243 RYKVLGSSNS DSDLFSRLAQ ILQNGSQKPR STTQCKSPGT PHNPKTPPKS 1151 1200 ENSTTRP00000010569/1-1225 PVVPRRSPSA SPRSSSLPRT SSSSPSRAGR PHHDQRSSSP HLGRSKSPPS bmy_10945T0/1-970 PVVPRRSPSA SPRSSSLPRT SSSSPSRAGR PHHDQRSSSP HVGRSKSPPS BACU019792/1-1229 PVVPRRSPSA SPRSSSLPRT SSSSPSRAGR PHHDQRSSSP HVGRSKSPPS ENSP00000267890/1-1244 PVVPRRSPSA SPRSSSLPRT SSSSPSRAGR PHHDQRSSSP HLGRSKSPPS ENSBTAP00000008483/1-1243 PVVPRRSPSA SPRSSSLPRT SSSSPSRAGR PHHDQRSSSP HLGRSKSPPS 1201 1250 ENSTTRP00000010569/1-1225 HSGSSSSRRS CQQEHCKPSK NGLKGSSSLH HHSASTKAPP GKSKSASKLS bmy_10945T0/1-970 HSGSSSSRRS CQQEHCKPSK NGLKVSSSLH HHSASTKAPP GKSKSASKLS BACU019792/1-1229 HSGSSSSRRS CQQEHCKPSK NGLKVSSSLH HHSASTKAPP GKSKSASKLS ENSP00000267890/1-1244 HSGSSSSRRS CQQEHCKPSK NGLKGSGSLH HHSASTKTPQ GKSKPASKLS ENSBTAP00000008483/1-1243 HSGSSSSRRS CQQEHCKPSK NGLKGSGSFH HHSASTKAPP GKSKSASKLS 1251 1300 ENSTTRP00000010569/1-1225 R bmy_10945T0/1-970 R BACU019792/1-1229 R ENSP00000267890/1-1244 R ENSBTAP00000008483/1-1243 R