KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:29 2014 Check: 00 .. Name: ENSP00000296220/1-747 Len: 758 Check: 744 Weight: 1.00 Name: bmy_02331T0/1-469 Len: 758 Check: 506 Weight: 1.00 Name: ENSBTAP00000008486/1-758 Len: 758 Check: 9178 Weight: 1.00 Name: ENSTTRP00000014215/1-750 Len: 758 Check: 3006 Weight: 1.00 Name: BACU009862/1-756 Len: 758 Check: 7949 Weight: 1.00 // 1 50 ENSP00000296220/1-747 ------MQGG EPVSTMKVSE SEGKLEGQAT AVTPNK---N SSCGGGI--S bmy_02331T0/1-469 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008486/1-758 MDFGVKMQGG EPVSAMKVSE SEGRLEGLAT AVTPNKNSSN SSCGGGISSS ENSTTRP00000014215/1-750 ------MQGG EPVSTMKVSE SEGRLEGLAT AVTPNKSSSN SSCGGGN--S BACU009862/1-756 MDFGVKMQGG EPVSTMKVSE SEGRLEGLAT AVTPNKNSSN SSCGGGS--S 51 100 ENSP00000296220/1-747 SSSSSRGGSA KGWQYSDHME NVYGYLMKYT NLVTGWQYRF FVLNNEAGLL bmy_02331T0/1-469 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008486/1-758 SSSSSRGGSA KGWQYSDHME NVYGYLMKYT NLVTGWQYRF FVLNNEAGLL ENSTTRP00000014215/1-750 SSGSSRGGSA KGWQYSDHME SVYGYLMKYT NLVTGWQYRF FVLNNEAGLL BACU009862/1-756 SSGSSRGGSA KGWQYSDHME SVCGYLMKYT NLVTGWQYRF FVLNNEAGLL 101 150 ENSP00000296220/1-747 EYFVNEQSRN QKPRGTLQLA GAVISPSDED SHTFTVNAAS GEQYKLRATD bmy_02331T0/1-469 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008486/1-758 EYFVNEQSRN QKPRGTLQLA GAVISPSDED SHTFTVNAAS GEQYKLRATD ENSTTRP00000014215/1-750 EYFVNEQSRN QKPRGTLQLA GAVISPSDED SHTFTVNAAS GEQYKLRATD BACU009862/1-756 EYFVNEQSRN QKPRGTLQLA GAVISPSDED SHTFTVNAAS GEQYKLRATD 151 200 ENSP00000296220/1-747 AKERQHWVSR LQICTQHHTE AIGKNNPPLK SRSFSLASSS NSPISQRRPS bmy_02331T0/1-469 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008486/1-758 AKERQHWVSR LQICTQHHTE AIGKNNPPLK SRSFSLASSG NSPISQRRPS ENSTTRP00000014215/1-750 AKERQHWVSR LQICTQHHTE AIGKNNPPLK SRSFSLASSG NSPISQRRPS BACU009862/1-756 AKERQHWVSR LQICTQHHTE AIGKNNPPLK SRSFSLASSG NSPISQRRPS 201 250 ENSP00000296220/1-747 QNAISFFNVG HSKLQSLSKR TNLPPDHLVE VREMMSHAEG QQRDLIRRIE bmy_02331T0/1-469 ---------- ---------- ---------- ---MMSHAEG QQRDLIRGIE ENSBTAP00000008486/1-758 QNTISFFNVG HSRLQSVSKR ANLPPDHLVE VREMMSHAEG QQRDLIRGIE ENSTTRP00000014215/1-750 QNAISFFNVG HSKLQSVNKR TNLPPDHLVE VREMMSHAEG QQRDLIRGIE BACU009862/1-756 QNAISFFNVG HSKLQSVSKR TNLPPDHLVE VREMMSHAEG QQRDLIRGIE 251 300 ENSP00000296220/1-747 CLPTSGHLSS LDQDLLMLKA TSMATMNCLN DCFHILQLQH ASHQKGSLPS bmy_02331T0/1-469 CLPASGHLSS LDQDLLMLKA TSMATMNCLN DCFHILQLQH ASHQKGSLPS ENSBTAP00000008486/1-758 CLPASGHLSS LDQDLLMLKA TSMATMNCLN DCFHILQLQH ASHQKGSLPS ENSTTRP00000014215/1-750 CLPASGHLSS LDQDLLMLKA TSMATMNCLN DCFHILQLQH ASHQKGSLPS BACU009862/1-756 CLPASGHLSS LDQDLLMLKA TSMATMNCLN DCFHILQLQH ASHQKGSLPS 301 350 ENSP00000296220/1-747 GTTIEWLEPK ISLSNHYKNG ADQPFATDQS KPVAVPEEQP VAESGLLARE bmy_02331T0/1-469 GTTIEWLEPK IPLSNHYKNG ADQPFATEQS KPVAVPEEQC VAESGLFARE ENSBTAP00000008486/1-758 GTTIEWLEPK IPLSNHYKNG ADQPFATEQS KPVAVPEEQC VAESGLLARE ENSTTRP00000014215/1-750 GTTIEWLEPK IPLSIHYKNG ADQPFATEQS KPVAVPEEQC VAESGLLARE BACU009862/1-756 GTTIEWLEPK IPLSNHYKNG ADQPFATEQS KPVAVPEEQC VAESGLFARE 351 400 ENSP00000296220/1-747 PEEINADDEI EDTCDHKEDD LGAVEEQRSV ILHLLSQLKL GMDLTRVVLP bmy_02331T0/1-469 PEEINADDEV EDTCDNKEDD LGAVEEQRSV ILHLLSQLKL GMDLTRVVLP ENSBTAP00000008486/1-758 PEEINADDEV EDTCDNKEDD LGAVEEQRSV ILHLLSQLKL GMDLTRVVLP ENSTTRP00000014215/1-750 PEEINADDEV QDTCDNKEDD LGAVEEQRSV ILHLLSQLKL GMDLTRVVLP BACU009862/1-756 PEEINADDEV EDTCDNKEDD LGAVEEQRSV ILHLLSQLKL GMDLTRVVLP 401 450 ENSP00000296220/1-747 TFILEKRSLL EMYADFMSHP DLFIAITNGA TAEDRMIRFV EYYLTSFHEG bmy_02331T0/1-469 TFILEKRSLL EMYADFMSHP DLFIAISNGA TAEDRMIRFV EYYLTSFHEG ENSBTAP00000008486/1-758 TFILEKRSLL EMYADFMSHP DLFIAITNGA TAEDRMIRFV EYYLTSFHEG ENSTTRP00000014215/1-750 TFILEKRSLL EMYADFMSHP DLFIAVSNGA TAEDRMIRFV EYYLTSFHEG BACU009862/1-756 TFILEKRSLL EMYADFMSHP DLFIAISNGA TAEDRMIRFV EYYLTSFHEG 451 500 ENSP00000296220/1-747 RKGAIAKKPY NPIIGETFHC SWKMPKSEVA SSVFSSSSTQ GVTNHAPLSG bmy_02331T0/1-469 RKGAIAKKPY NPIIGEMFHC SWRMPKREVA SSVISSSSTQ AVTNHVPPSE ENSBTAP00000008486/1-758 RKGAIAKKPY NPIIGETFHC SWRMPKSEVA SSVINSSSTQ AITNHVPPSE ENSTTRP00000014215/1-750 RKGAIAKKPY NPIIGETFHC SWRIPKRDVA SSVISSSSTQ AVTNHAPPSE BACU009862/1-756 RKGAIAKKPY NPIIGETFHC SWRMPKREVA SSVISSSSTQ AVTNHAPPSE 501 550 ENSP00000296220/1-747 ESLTQVGSDC YTVRFVAEQV SHHPPVSGFY AECTERKMCV NAHVWTKSKF bmy_02331T0/1-469 EALSQVGSDC YTVRFVAEQV SHHPPVSGFY AECAERKMCV NVHVWTKSKF ENSBTAP00000008486/1-758 EALNQMGSDC YTVRFVAEQV SHHPPVSGFY AECAERKICV NAHVWTKSKF ENSTTRP00000014215/1-750 EALSQVGSDC YTVRFVAEQV SHHPPVSGFY AECAEKKMCV NVHVWTKSKF BACU009862/1-756 EALSQVGSDC YTVRFVAEQV SHHPPVSGFY AECAERKMCV NVHVWTKSKF 551 600 ENSP00000296220/1-747 LGMSIGVTMV GEGILSLLEH GEEYTFSLPC AYARSILTVP WVELGGKVSV bmy_02331T0/1-469 LGMSIGVTMV GEGILSLLEH GEEYTFSLPC AYARSILTVP WVELGGKVNV ENSBTAP00000008486/1-758 LGMSIGVTMV GEGILSLLEH GEEYTFSLPC AYARSILTVP WVELGGKVNV ENSTTRP00000014215/1-750 LGMSIGVTMV GEGILSLLEH GEEYTFSLPC AYARSILTVP WVELGGKVSV BACU009862/1-756 LGMSIGVTMV GEGILSLLEH GEEYTFSLPC AYARSILTVP WVELGGKVNV 601 650 ENSP00000296220/1-747 NCAKTGYSAS ITFHTKPFYG GKLHRVTAEV KHNITNTVVC RVQGEWNSVL bmy_02331T0/1-469 NCAKTGYSAS ITFHTKPFYG GKLHRVTGEV KHNITNTVVC RVQGEWNSVL ENSBTAP00000008486/1-758 NCAKTGYSAS ITFHTKPFYG GKLHRVTGEV KHNITNTVVC RVQGEWNSVL ENSTTRP00000014215/1-750 NCAKTGYSAS ITFHTKPFYG GKLHRVTGEV KHNITNTVVC RVQGEWNSVL BACU009862/1-756 NCAKTGYSAS ITFHTKPFYG GKLHRVTGEV KHNITNTVVC RVQGEWNSVL 651 700 ENSP00000296220/1-747 EFTYSNGETK YVDLTKLAVT KKRVRPLEKQ DPFESRRLWK NVTDSLRESE bmy_02331T0/1-469 EFTYSNGETK YVDLTKLAVT KKRVRPLEKQ DPFESRYVIL A--------- ENSBTAP00000008486/1-758 EFAYSSGETK YVDLTKLAVT KKRVRPLEKQ DPFESRRLWK NVTDSLRDSE ENSTTRP00000014215/1-750 EFTYSNGETK CVDLTKLAVT KKRVRPLEKQ DPFESRRLWR NVTDSLRESD BACU009862/1-756 EFTYSNGETK YVDLTKLAVT KKRVRPLEKQ DPFESRRLWR NVTDSLRESE 701 750 ENSP00000296220/1-747 IDKATEHKHT LEERQRTEER HRTETGTPWK TKYFIKEGDG WVYHKPLWKI bmy_02331T0/1-469 ---------S IQERVRNS-- -----GS--- ---------- ---------- ENSBTAP00000008486/1-758 IDKATEHKRT LEERQRTEER HRTETGTPWK TKYFIKEGDG WVYHKPLWKI ENSTTRP00000014215/1-750 IDKATEHKRT LEERQRTEER HRTETGTPWK TKYFIKEGDA WVYHKPLWKI BACU009862/1-756 IDKATEHKRT LEERQRTEER HRTETGTPWK TKYFIKEGDG WVYHKPLWKI 751 800 ENSP00000296220/1-747 IPTTQPAE bmy_02331T0/1-469 -------- ENSBTAP00000008486/1-758 IPTTQPAE ENSTTRP00000014215/1-750 IPTVQPAE BACU009862/1-756 IPTVQPAE