KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:30 2014 Check: 00 .. Name: ENSTTRP00000004639/1-779 Len: 813 Check: 7985 Weight: 1.00 Name: bmy_17744T0/1-804 Len: 813 Check: 8829 Weight: 1.00 Name: ENSP00000253693/1-813 Len: 813 Check: 6424 Weight: 1.00 Name: BACU018958/1-779 Len: 813 Check: 80 Weight: 1.00 Name: ENSBTAP00000008495/1-813 Len: 813 Check: 4404 Weight: 1.00 // 1 50 ENSTTRP00000004639/1-779 ---------- ---------- ---------- ----EAAQAL IYAEMAGSSL bmy_17744T0/1-804 MDSAALERDA VQFARLAVQR DHQGRYSEAV FYYKEAAQAL IYAEMAGSSL ENSP00000253693/1-813 MDATALERDA VQFARLAVQR DHEGRYSEAV FYYKEAAQAL IYAEMAGSSL BACU018958/1-779 ---------- ---------- ---------- ----EAAQAL IYAEMAGSSL ENSBTAP00000008495/1-813 MDSAALERDA VQFARLAVQR DQEGRYAEAV FYYKEAAQAL IYAEMAGSSL 51 100 ENSTTRP00000004639/1-779 EHIQEKINEY LERVQALHSA VQSKSADPLK SKHQLDLERA HFLVTQAFDE bmy_17744T0/1-804 ERIQEKINEY LERVQALHSA VQSKSADPLK SKHQLDLERA HFLVTQAFDE ENSP00000253693/1-813 ENIQEKITEY LERVQALHSA VQSKSADPLK SKHQLDLERA HFLVTQAFDE BACU018958/1-779 EHIQEKINEY LERVQALHSA VQSKSADPLK SKHQLDLERA HFLVTQAFDE ENSBTAP00000008495/1-813 EHIQEKINEY LERVQALHSA VQSKSADPLK SKHQLDLERA HFLVTQAFDE 101 150 ENSTTRP00000004639/1-779 DEKGNVEDAI ELYTEAVDLC LKTSYETADK TLQNKLKQLA RQALDRAEAL bmy_17744T0/1-804 DEKGNVEDAI ELYTEAVDLC LKTSYETADK TLQNKLKQLA RQALDRAEAL ENSP00000253693/1-813 DEKENVEDAI ELYTEAVDLC LKTSYETADK VLQNKLKQLA RQALDRAEAL BACU018958/1-779 DEKGNVEDAI ELYTEAVDLC LKTSYETADK TLQNKLKQLA RQALDRAEAL ENSBTAP00000008495/1-813 DEKGNVEDAI ELYTEAVDLC LKTSYETADK TLQNKLKQLA RQALDRAEAL 151 200 ENSTTRP00000004639/1-779 SEPLTKPSCK XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_17744T0/1-804 SEPLTKPSCK IKATNIKPKP PPVRAHFPLG TNPFLERPQP FISPQSCDAQ ENSP00000253693/1-813 SEPLTKPVGK ISSTSVKPKP PPVRAHFPLG ANPFLERPQS FISPQSCDAQ BACU018958/1-779 SEPLTKPSCK IKATNIKPKP PPVRAHLPLG TNPFLERPQP VISPQSCDAQ ENSBTAP00000008495/1-813 SEPLTKQSCK IKATNTKPKP PPTRTHFPLG TNPFLERPQP FISPQSCDAQ 201 250 ENSTTRP00000004639/1-779 XXXXXXXXXX XXXTTSKING MEYVPFMSID LRERFAYPMP FCDRCGKLPL bmy_17744T0/1-804 GQRYTAEEIE VLRTTSKING IEYVPFMNID LRERFAYPMP FCDRCGKLPL ENSP00000253693/1-813 GQRYTAEEIE VLRTTSKING IEYVPFMNVD LRERFAYPMP FCDRWGKLPL BACU018958/1-779 GQRYTAEEIE VLRTTSKING IEYVPFMNID LRERFAYPMP FCDRCGKLPL ENSBTAP00000008495/1-813 GQRYTAEEIE VLRTTSKING IEYVPFMSID LRERFAYPMP FCDRCGKLPL 251 300 ENSTTRP00000004639/1-779 SPKQKATFSK WVRPEDLTNN PTMIYTVSSF SIKQTIVSDC SFVASLAISA bmy_17744T0/1-804 SPKQKATFSK WVRPEDLTNN PTMIYTVSSF SIKQTIVSDC SFVASLAISA ENSP00000253693/1-813 SPKQKTTFSK WVRPEDLTNN PTMIYTVSSF SIKQTIVSDC SFVASLAISA BACU018958/1-779 APKQKATFSK WVRPEDLTNN PTMIYTVSSF SIKQTIVSDC SFVASLAISA ENSBTAP00000008495/1-813 SPKQKATFSK WVRPEDLTNN PTMIYTVSSF SIKQTIVSDC SFVASLAISA 301 350 ENSTTRP00000004639/1-779 AYERRFNKKL ITSIIYPQNK DGEPEYNPCG KYMVKLHLNG VPRKVIIDDQ bmy_17744T0/1-804 AYERRFNKKL ITSIIYPQNK DGEPEYNPCG KYMVKLHLNG VPRKVIIDDQ ENSP00000253693/1-813 AYERRFNKKL ITGIIYPQNK DGEPEYNPCG KYMVKLHLNG VPRKVIIDDQ BACU018958/1-779 AYERRFNKKL ITSIIYPQNK DGEPEYNPCG KYMVKLHLNG VPRKVIIDDQ ENSBTAP00000008495/1-813 AYERRFNKKL ITSIIYPQNK DGEPEYNPCG KYMVKLHLNG VPRKVIIDDQ 351 400 ENSTTRP00000004639/1-779 LPVDHKGELL CSYSNNKSEL WVSLIEKAYM KVMGGYDFPG SNSNIDLHAL bmy_17744T0/1-804 LPVDHKGELL CSYSNNKSEL WVSLIEKAYM KVMGGYDFPG SNSNIDLHAL ENSP00000253693/1-813 LPVDHKGELL CSYSNNKSEL WVSLIEKAYM KVMGGYDFPG SNSNIDLHAL BACU018958/1-779 LPVDHKGELL CSYSNNKSEL WVSLIEKAYM KVMGGYDFPG SNSNIDLHAL ENSBTAP00000008495/1-813 LPVDHKGELL CSYSNNKSEL WVSLIEKAYM KVMGGYDFPG SNSNIDLHAL 401 450 ENSTTRP00000004639/1-779 TGWIPERIAM HSDSQTFSKD NSFRMLYQRF HKGDVLITAS TGVMTEAEGE bmy_17744T0/1-804 TGWIPERIAM HSDSQTFSKD NSFRMLYQRF HKGDVLITAS TGVMTEAEGE ENSP00000253693/1-813 TGWIPERIAM HSDSQTFSKD NSFRMLYQRF HKGDVLITAS TGMMTEAEGE BACU018958/1-779 TGWIPERIAM HSDSQTFSKD NSFRMLYQRF HKGDVLITAS TGVMTEAEGE ENSBTAP00000008495/1-813 TGWIPERIAM HSDSQAFSKD NSFRMLYQRF HKGDVLITAS TGVMTEAEGE 451 500 ENSTTRP00000004639/1-779 RWGLVPTHAY AVLDIREFKG LRFIQLKNPW SHLRWKGRYS ENDVKNWTPE bmy_17744T0/1-804 RWGLVPTHAY AVLDIRELKG LRFIQLKNPW SHLRWKGRYS ENDVKNWTPE ENSP00000253693/1-813 KWGLVPTHAY AVLDIREFKG LRFIQLKNPW SHLRWKGRYS ENDVKNWTPE BACU018958/1-779 RWGLVPTHAY AVLDIRELKG LRFIQLKNPW SHLRWKGRYS ENDVKNWTPE ENSBTAP00000008495/1-813 KWGLVPTHAY AVLDIREFKG LRFIQLKNPW SHLRWKGRYS ENDVKNWTPE 501 550 ENSTTRP00000004639/1-779 LQKCLNFDPR TAQKIDNGIF WISWDDLCQY YDVIYLSWNP GLFKESTCIH bmy_17744T0/1-804 LQKCLNFDPR TAQKIDNGIF WISWDDLCQY YDVIYLSWNP GLFKESTCIH ENSP00000253693/1-813 LQKYLNFDPR TAQKIDNGIF WISWDDLCQY YDVIYLSWNP GLFKESTCIH BACU018958/1-779 LQKCLNFDPR TAQKIDNGIF WISWDDLCQY YDVIYLSWNP GLFKESTCIH ENSBTAP00000008495/1-813 LQKYLNFDPR TAQKIDNGIF WISWDDLCQY YDVIYLSWNP GLFKESTCIH 551 600 ENSTTRP00000004639/1-779 STWDAKQGPV KDAYSLANNP QYKLEVQCPQ GGAAVWVLLS RHITDKDDFA bmy_17744T0/1-804 STWDAKQGPV KDAYSLANNP QYKLEVQCPQ GGAAVWVLLS RHITDKDDFA ENSP00000253693/1-813 STWDAKQGPV KDAYSLANNP QYKLEVQCPQ GGAAVWVLLS RHITDKDDFA BACU018958/1-779 STWDAKQGPV KDAYSLANNP QYKLEVQCPQ GGAAVWVLLS RHITDKDDFA ENSBTAP00000008495/1-813 STWDAKQGPV KDAYSLANNP QYKLEVQCPQ GGAAVWVLLS RHITDKDDFA 601 650 ENSTTRP00000004639/1-779 NNREFITMVV YKTDGKKVYY PADPPPYIDG IRIXXXXXXX XXXXXXXXXX bmy_17744T0/1-804 NNREFITMVV YKTDGKKVYY PADPPPYIDG IRINSPHYLT KIKLTTPGTH ENSP00000253693/1-813 NNREFITMVV YKTDGKKVYY PADPPPYIDG IRINSPHYLT KIKLTTPGTH BACU018958/1-779 NNREFITMVV YKTDGKKVYY PADPPPYIDG IRINSPHYLT KIKLTTPGTH ENSBTAP00000008495/1-813 NNREFITMVV YKTDGKKVYY PADPPPYIDG IRINSPHYLT KIKLTTPGTH 651 700 ENSTTRP00000004639/1-779 XXXXXXXXXX XXXXXXXXXX VYSACSFTFS KIPSPYTISK QINGKWSGQS bmy_17744T0/1-804 TFTLVVSQYE KQNTIHYTVR SNKS---SFS LHNTFIELKK KTLNLVKGNR ENSP00000253693/1-813 TFTLVVSQYE KQNTIHYTVR VYSACSFTFS KIPSPYTLSK RINGKWSGQS BACU018958/1-779 TFTLVVSQYE KQNTIHYTVR VYSACSFTFS KIPSPYTVSK QINGKWSGQS ENSBTAP00000008495/1-813 TFTLVVSQYE KQNTIHYTVR VYSACSFTFS KIPSPYTVSK QINGKWSGQS 701 750 ENSTTRP00000004639/1-779 AGGCGNFQET HKNNPIYQFH IEKTGPLLIE LRGPRQYSVG FEVVTVSVVG bmy_17744T0/1-804 LPINMALRYT QHAALLFQRF LHHI------ LYQNRQYSVG FEVVTVSVVG ENSP00000253693/1-813 AGGCGNFQET HKNNPIYQFH IEKTGPLLIE LRGPRQYSVG FEVVTVSTLG BACU018958/1-779 AGGCGNFQET HKNNPIYQFH IEKTGPLLIE LRGPRQYSVG FEVVTVSVVG ENSBTAP00000008495/1-813 AGGCGNFQET HKNNPIYQFH IEKTGPLLIE LRGPRQYSVG FEVVTVSVVG 751 800 ENSTTRP00000004639/1-779 DPGPHGFQRK SSGDYRCGFC YLELENIPAG IYNIIPSTFL PKQEGPFFLD bmy_17744T0/1-804 DPGPHGFQRK SSGDYRCGFC YLELENIPAG IYNIVPSTFL PKQEGPFFLD ENSP00000253693/1-813 DPGPHGFLRK SSGDYRCGFC YLELENIPSG IFNIIPSTFL PKQEGPFFLD BACU018958/1-779 DPGPHGFQRK SSGDYRCGFC YLELENIPAG IYNIIPSTFL PKQEGPFFLD ENSBTAP00000008495/1-813 DPGPHGFQRK SSGDYRCGFC YLELENIPAG IYNIIPSTFL PKQEGPFFLD 801 850 ENSTTRP00000004639/1-779 FNSIIPIKTT QLQ bmy_17744T0/1-804 FNSIIPIKTT QLQ ENSP00000253693/1-813 FNSIIPIKIT QLQ BACU018958/1-779 FNSIIPIKTT QLQ ENSBTAP00000008495/1-813 FNSIIPIKTT QLQ