KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:31 2014 Check: 00 .. Name: ENSP00000402855/1-311 Len: 866 Check: 4205 Weight: 1.00 Name: ENSBTAP00000008500/1-315 Len: 866 Check: 4118 Weight: 1.00 Name: ENSTTRP00000012710/1-310 Len: 866 Check: 6306 Weight: 1.00 Name: bmy_11331T0/1-288 Len: 866 Check: 4818 Weight: 1.00 Name: BACU017998/1-864 Len: 866 Check: 2410 Weight: 1.00 // 1 50 ENSP00000402855/1-311 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008500/1-315 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012710/1-310 ---------- ---------- ---------- ---------- ---------- bmy_11331T0/1-288 ---------- ---------- ---------- ---------- ---------- BACU017998/1-864 MAPTFLLLLL LWPQGPVAGA PVESVYSKVR HFEGETLSVQ CSYKSRKNHI 51 100 ENSP00000402855/1-311 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008500/1-315 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012710/1-310 ---------- ---------- ---------- ---------- ---------- bmy_11331T0/1-288 ---------- ---------- ---------- ---------- ---------- BACU017998/1-864 EGKVWCKIRR KKCETVFTRV GVQGPRYLLQ DDTQAKVVSI TMAALRRQDS 101 150 ENSP00000402855/1-311 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008500/1-315 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012710/1-310 ---------- ---------- ---------- ---------- ---------- bmy_11331T0/1-288 ---------- ---------- ---------- ---------- ---------- BACU017998/1-864 GRYWCMRNSS GILYPLMGFL LEVSPASTTK RNTPLTKLPT ILQSGTVVTA 151 200 ENSP00000402855/1-311 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008500/1-315 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012710/1-310 ---------- ---------- ---------- ---------- ---------- bmy_11331T0/1-288 ---------- ---------- ---------- ---------- ---------- BACU017998/1-864 GPALTSGPDA PFTTSTTVFT PGLLTLPRLL PFPASGSIRL TSVTGYGFTG 201 250 ENSP00000402855/1-311 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008500/1-315 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012710/1-310 ---------- ---------- ---------- ---------- ---------- bmy_11331T0/1-288 ---------- ---------- ---------- ---------- ---------- BACU017998/1-864 ASPSTTGPRR TMGSQTVTAS PSNAAASAAG PASTPTKAGH LCTTGSPTMG 251 300 ENSP00000402855/1-311 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008500/1-315 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012710/1-310 ---------- ---------- ---------- ---------- ---------- bmy_11331T0/1-288 ---------- ---------- ---------- ---------- ---------- BACU017998/1-864 MCPTGRSLLN QLSPSRHQDF YPAVLVGVLA LLPVPVMLIV VYGFWKKRHM 301 350 ENSP00000402855/1-311 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008500/1-315 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012710/1-310 ---------- ---------- ---------- ---------- ---------- bmy_11331T0/1-288 ---------- ---------- ---------- ---------- ---------- BACU017998/1-864 GIQGKDEILH KAPCVCPPQE KGDMEPLGLL ILLFVTELSR AHNTTVFQGT 351 400 ENSP00000402855/1-311 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008500/1-315 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012710/1-310 ---------- ---------- ---------- ---------- ---------- bmy_11331T0/1-288 ---------- ---------- ---------- ---------- ---------- BACU017998/1-864 AGRSLRVSCP YNFLKHWGRR KAWCRQLGEE GLCQQVVSTH PSWLLSFLKR 401 450 ENSP00000402855/1-311 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008500/1-315 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012710/1-310 ---------- ---------- ---------- ---------- ---------- bmy_11331T0/1-288 ---------- ---------- ---------- ---------- ---------- BACU017998/1-864 RNGSTAIMDD ALGGTLTITL RNLQAHDAGL YQCQSLHGSE ADTLRKVLVE 451 500 ENSP00000402855/1-311 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008500/1-315 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012710/1-310 ---------- ---------- ---------- ---------- ---------- bmy_11331T0/1-288 ---------- ---------- ---------- ---------- ---------- BACU017998/1-864 VLADPLDYQD PGDLWIPEES KSFEDAHVEH SISRKLSEEE SPFPPISILF 501 550 ENSP00000402855/1-311 ---------- ---------- ---------- ---------- ---------M ENSBTAP00000008500/1-315 ---------- ---------- ---------- ---------- ---------M ENSTTRP00000012710/1-310 ---------- ---------- ---------- ---------- ---------M bmy_11331T0/1-288 ---------- ---------- ---------- ---------- ---------M BACU017998/1-864 LLACIFLSKL LAASALWAAA WHGQKRRTPH ASGLDCGHDP GFQLQTLTAM 551 600 ENSP00000402855/1-311 GLTLLLLLLL GLEGQGIVGS LPEVLQAPVG SSILVQCHYR LQDVKAQKVW ENSBTAP00000008500/1-315 GPKLLLLLLL GLIGQGSAGS LPELLQASVG SSILVQCHYR LQDVKARKVW ENSTTRP00000012710/1-310 GPNLLLLLFL GLAGQGSAGS LPEVLQAPVG SSILVQCHYR LQDVKARKVW bmy_11331T0/1-288 GPNLLLLLFL GLAGQGSAGS LPEVLQAPVG SSILVQCHYR LQDVKARKVW BACU017998/1-864 GPNLLLLLFL GLAGQGSAGS LPEVLQAPVG SSILVQCHYR LQDVKARKVW 601 650 ENSP00000402855/1-311 CRFLPEGCQP LVSSAVDRRA PAGRRTFLTD LGGGLLQVEM VTLQEEDAGE ENSBTAP00000008500/1-315 CQVLPEGCQP LVTSTVNRGV PASSRIFLTD LGGGLLQVEM LALREEDAGE ENSTTRP00000012710/1-310 CRFLPEGCQP LVSSAVDRRA PASSRIFLTD LGGGLLQVEM VTLQEEDAGE bmy_11331T0/1-288 CRFLPEGCQP LVSSAVERRA PASSRVFLTD LGGGLLQVEM VTLQEEDAGE BACU017998/1-864 CRFLPEGCQP LVSSAVERRA PASSRVFLTD LGGGLLQVEM VTLQEEDAGE 651 700 ENSP00000402855/1-311 YGCMVDGARG PQILHRVSLN ILPP-----E EEEETHKIGS LAENAFSDPA ENSBTAP00000008500/1-315 YACVVEGLSG TQTVHRVTLD VLPAAPA--L KEEEIHQDAT LGESSSLDSV ENSTTRP00000012710/1-310 YGCVVEGISG PQTVHRISLD VLPA-----E KDEETHQVGS LADISSSDPV bmy_11331T0/1-288 YGCVVEGISG PQTVHRISLD VLPA-----E DDEETHQVRS LADISSSDPV BACU017998/1-864 YGCVVEGISG PQTVHRISLD VLPAAPGLKE DDEETHQVRS LADISSSDPV 701 750 ENSP00000402855/1-311 GSANPLEPSQ DEKSIPLIWG AVLLVGLLVA -AVVLFAVMA KRKQGNRLGV ENSBTAP00000008500/1-315 DSDSPLDTSQ DKKSRAWIWG AVFLLGLLVM VAVMLLAVMA KRKAGNRFAV ENSTTRP00000012710/1-310 GSASPLDPSR DKKSRPLIWG AVLLLGLLVL -AVVL-AVXX XXXXXXXXXX bmy_11331T0/1-288 GSASPLDPSQ DKKSRPLIWG AVLLLGLLVM -AVVLFAVMA KRK------- BACU017998/1-864 GSASPLDPSR DKKSRPLIWG AVLLLGLLVM -AVVLFAVMA KRK-GNRLAA 751 800 ENSP00000402855/1-311 CGRFLSSRVS GMNPSSVVHH VSDSGPAAEL PLDVPHIRLD SPPSFDNTTY ENSBTAP00000008500/1-315 GGQFQSSGIS NTAPSSVVQH VSDSGLAVDL PSDVPYVKLD SPPSFDDTTY ENSTTRP00000012710/1-310 XXXXXXXXXX XXAPSSVVHH ISDSGLAADL PSDVPYVRLD SPPSFDNNTY bmy_11331T0/1-288 ---------- ------VVHH ISDSGLAVDL PSDVPYVRLD SPPSFDNNTY BACU017998/1-864 CGRFQSSGVS GSAPSSVVHH ISDSGLAADV PSGVPYVRLD SPPSFDNNTY 801 850 ENSP00000402855/1-311 TSLPLDSPSG KPSLPAPSSL PPLPPKVLVC SKPVTYATVI FPGGNKGGGT ENSBTAP00000008500/1-315 TSLPPDPLSG KLLPLDPPCV PPLPPKVEIS SKPVTYATVI FPGMGKSGGA ENSTTRP00000012710/1-310 TNLPLDSLSG KHPPPAPSCL PPLPAKAEIC SKPVTYATVT FPGGDKSGGA bmy_11331T0/1-288 TNLPLDSLSG KHPPPAPSCL PPLPPKAEIC SKPVTYATVI FPGGDKSGGA BACU017998/1-864 TNLPLDSLSG KHPPPAPSCL PPLPPKAEIC SKPVTYATVI FPGGDKSGGA 851 900 ENSP00000402855/1-311 SCGPAQNPPN NQTPSS ENSBTAP00000008500/1-315 SCEPAQEPPN SQAPPS ENSTTRP00000012710/1-310 SFEPAQDPPN SEIPPS bmy_11331T0/1-288 SFEPAQDPPN SEIPPS BACU017998/1-864 SFEPAQDPPN SEIPPS