KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:33 2014 Check: 00 .. Name: ENSTTRP00000010940/1-305 Len: 314 Check: 4051 Weight: 1.00 Name: ENSP00000264734/1-305 Len: 314 Check: 5653 Weight: 1.00 Name: ENSBTAP00000008509/1-254 Len: 314 Check: 3601 Weight: 1.00 Name: bmy_07304T0/1-204 Len: 314 Check: 4586 Weight: 1.00 Name: BACU016517/1-287 Len: 314 Check: 9605 Weight: 1.00 // 1 50 ENSTTRP00000010940/1-305 MTSRTPLWVA ACLYYSYRSL RRLQWGVRKR KRPAFSHPQV PEAQKTD--T ENSP00000264734/1-305 MTSRTPLLVT ACLYYSYCNS RHLQQGVRKS KRPVFSHCQV PETQKTD--T ENSBTAP00000008509/1-254 ---------- ---------- ---------- ---------- ---------- bmy_07304T0/1-204 ---------- ---------- ---------- ---------- ---------- BACU016517/1-287 ---------- ---------- MVTFEKILED GRASQQHPQV PEAQKTDGIP 51 100 ENSTTRP00000010940/1-305 SYLRGSRAGS CPCSLADRLF VKMRDLFQYV ACFFAFFSTG FLVVATWTDC ENSP00000264734/1-305 RHLSGARAGV CPCCHPDGLL ATMRDLLQYI ACFFAFFSAG FLIVATWTDC ENSBTAP00000008509/1-254 ---MGPGLAA SHVSFPDSLL AKMRDLLQYV ACFFAFFSAG FLVVATWTDC bmy_07304T0/1-204 ---------- ---------- ---------- ---------- ---------- BACU016517/1-287 ATCMGPGLTA AHVSLADRLF VKMRDLFQYV ACFFSFFSTG FLVVATWTDC 101 150 ENSTTRP00000010940/1-305 WMVNADDSLE VSTKCRGLWW ECVTNAFDGI RTCDEYDSIL AEHPLK---- ENSP00000264734/1-305 WMVNADDSLE VSTKCRGLWW ECVTNAFDGI RTCDEYDSIL AEHPLK---- ENSBTAP00000008509/1-254 WMVNADDSLE VSTKCRGLWW ECVTNAFDGI RTCDEYDSIL AEHSLK---- bmy_07304T0/1-204 ---------- VSTKCRGLWW ECVTNAFDGI RTCDEYDSIF AEHSCTYALD BACU016517/1-287 WTVNADDSLE VSTKCRGLWW ECVTNAFDGI RTCDEYDSIF AEHSLK---- 151 200 ENSTTRP00000010940/1-305 ---LVVTRAL MITADILAGF GFIILLLGLD CVKFLPDEPY IKVRICFVAG ENSP00000264734/1-305 ---LVVTRAL MITADILAGF GFLTLLLGLD CVKFLPDEPY IKVRICFVAG ENSBTAP00000008509/1-254 ---LVVTRAL MITADILAGF GFITLLLGLD CVKFLPDEPY IKVRISFVAG bmy_07304T0/1-204 ITLLVVTRAL MITADILAGF GFITLLLGLD CVKLLPDEPY IKVRICFVAG BACU016517/1-287 ---LVVTRAL MITADILAGF GFITLLLGLD CVKLLPDEPY IKVRICFVAG 201 250 ENSTTRP00000010940/1-305 TTLLIAXXXX XXXXXXXXVD VYVERSSLVL HNIFLGIQYK FGWSCWLGMA ENSP00000264734/1-305 ATLLIAGTPG IIGSVWYAVD VYVERSTLVL HNIFLGIQYK FGWSCWLGMA ENSBTAP00000008509/1-254 TTLLIAGAPG IIGSVWYAVD VYVERSSLVL HNIFLGIQYK FGWSCWLGMA bmy_07304T0/1-204 TTLLIAGAPG IIGSVWYAVD VYVERSSLVL HNIFIGIQYK FGWSCWLGMA BACU016517/1-287 TTLLIAGAPG IIGSVWYAVD VYVERSSLAL HNIFIGIQYK FGWSCWLGMA 251 300 ENSTTRP00000010940/1-305 GSLGCFLAGA VLTCCLYLFK DVGPERNYPY SRRKGYSTTA VSMAQSYAAP ENSP00000264734/1-305 GSLGCFLAGA VLTCCLYLFK DVGPERNYPY SLRKAYSAAG VSMAKSYSAP ENSBTAP00000008509/1-254 GSLGCFLAGA ILTCCLYLFK DVGPERSYPY STRKAYSTTA VSMPRSHAIP bmy_07304T0/1-204 GSLGCFLAGA VLTCCLYIFK DVGPERNYPY SRRKAYSTTA VSMAPSYAAP BACU016517/1-287 GSLGCFLAGA VLTCCLYIFK DVGPERNYPY SRRKAYSTTA VSMAPSYAAP 301 350 ENSTTRP00000010940/1-305 RTQTAKMYAV DTRV ENSP00000264734/1-305 RTETAKMYAV DTRV ENSBTAP00000008509/1-254 RTQTAKMYAV DTRV bmy_07304T0/1-204 RTQTAKMYAV DTRV BACU016517/1-287 RTQTAKMYAV DTRV