KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:39 2014 Check: 00 .. Name: ENSP00000362135/1-279 Len: 280 Check: 4600 Weight: 1.00 Name: ENSBTAP00000008530/1-276 Len: 280 Check: 2870 Weight: 1.00 Name: ENSTTRP00000012846/1-148 Len: 280 Check: 137 Weight: 1.00 Name: bmy_02118T0/1-257 Len: 280 Check: 8816 Weight: 1.00 Name: BACU020084/1-148 Len: 280 Check: 9941 Weight: 1.00 // 1 50 ENSP00000362135/1-279 MSPARRCRGM RAAVAASVGL SEGPAGS-RS GRLFRPPSPA PAAPGARLLR ENSBTAP00000008530/1-276 MSPARPCRGL RAVVAASMGL SEGPAGSARS GRLLRSPSP- --TPGARLLR ENSTTRP00000012846/1-148 ---------- ---------- ---------- ---------- ---------- bmy_02118T0/1-257 MSPARSCTGL RAAVAASVGL SEGPAGSARS GRLLRPPSPA PAAPGARLFR BACU020084/1-148 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000362135/1-279 LPGSGAVQAA SPERAGWTEA LRAAVAELRA GAVVAVPTDT LYGLACAASC ENSBTAP00000008530/1-276 LPGSGAGRAA NPERGGWTEA LRAAVAELRA GAVVAVPTDT LYGLACSASC ENSTTRP00000012846/1-148 ---------- ---------- ---------- ---------- ---------- bmy_02118T0/1-257 LPGSGAVRAA NPERAGWTEA LRAAVAELRA GAVVAVPTDT LYGLACSASC BACU020084/1-148 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000362135/1-279 SAALRAVYRL KGRSEAKPLA VCLGRVADVY RYCRVRVPEG LLKDLLPGPV ENSBTAP00000008530/1-276 SEALGAVYRV KGRSETKPLA VCLGRVADVY RYCHVRVPEG LLKDLLPGPV ENSTTRP00000012846/1-148 ---------- ---------- ---------- -YCRVRVPEG LLNDLLPGPV bmy_02118T0/1-257 SEALGVVYRV KGRSETKPLA VCLGRVADVY RYCRVRVPEG LLNDLLPGPV BACU020084/1-148 ---------- ---------- ---------- -YCRVRVPEG LLNDLLPGPV 151 200 ENSP00000362135/1-279 TLVMERSEEL NKDLNPFTPL VGIRIPDHAF MQDLAQMFEG PLALTSANLS ENSBTAP00000008530/1-276 TLVMERSEEL NKDLNPFTPL VGIRIPDHAF MQDLAQMFGG PLALTSANLS ENSTTRP00000012846/1-148 TLVMERSEEL NKDLNPFTPL VGIRIPDHAF MQDLAQVFGG PLALTSANLS bmy_02118T0/1-257 TLVMERSEEL NKDLNPFTPL VGIRIPDHAF MQDLAQVFGG PLALTSANLS BACU020084/1-148 TLVMERSEEL NKDLNPFTPL VGIRIPDHAF MQDLAQVFGG PLALTSANLS 201 250 ENSP00000362135/1-279 SQASSLNVEE FQDLWPQLSL VIDGGQIGDG QSPECRLGST VVDLSVPGKF ENSBTAP00000008530/1-276 SQSSSLNVEE FQDLWPHLSL IIDGGPIGDG QSPECRLGST VVDLSVPGKF ENSTTRP00000012846/1-148 SQTSSLNVEE FQDLWPRLSL VIDGGPIGDD QSPECRLGST VVDLSVPGVF bmy_02118T0/1-257 SQASSLNVEE FQDLWPRLSL VIDGGPIGDG QSPECRLGST VVDLSVPGEF BACU020084/1-148 SQASSLNVEE FQDLWPRLSL VIDGGPIGDG QSPECRLGST VVDLSVPGEF 251 300 ENSP00000362135/1-279 GIIRPGCALE STTAILQQKY GLLPSHASYL ENSBTAP00000008530/1-276 GIIRPGCALE STSAIL-QEY GLLPSHGSCW ENSTTRP00000012846/1-148 GIIRPGCALE STSAIL-QKY GLLPLRESCL bmy_02118T0/1-257 GIIRPG---- ---------- ---------W BACU020084/1-148 GIIRPGCALE STSAIL-QKY GLLPLRGSCL