KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:40 2014 Check: 00 .. Name: BACU005266/1-457 Len: 577 Check: 8142 Weight: 1.00 Name: ENSTTRP00000007702/1-364 Len: 577 Check: 5719 Weight: 1.00 Name: bmy_19342T0/1-576 Len: 577 Check: 5174 Weight: 1.00 Name: ENSP00000225729/1-364 Len: 577 Check: 4795 Weight: 1.00 Name: ENSBTAP00000008544/1-364 Len: 577 Check: 5676 Weight: 1.00 // 1 50 BACU005266/1-457 MGILEKISEI EKEIARTQKN KATEYHLGLL KAKLAKYRAQ LLEPSKSSSS ENSTTRP00000007702/1-364 MGILEKISEI EKEIARTQKN KATEYHLGLL KAKLAKYRAQ LLEPSKSSSS bmy_19342T0/1-576 MGILEKISEI EKEIARTQKN KATEYHLGLL KAKLAKYRAQ LLEPSKSSSS ENSP00000225729/1-364 MGILEKISEI EKEIARTQKN KATEYHLGLL KAKLAKYRAQ LLEPSKSASS ENSBTAP00000008544/1-364 MGILEKISEI EKEIARTQKN KATEYHLGLL KAKLAKYRAQ LLEPSKSSSS 51 100 BACU005266/1-457 KGEGFDVMKS GDARVALIGF PSVGKSTFLS LMTSTASEAA SYEFTTLTCI ENSTTRP00000007702/1-364 KGEGFDVMKS GDARVALIGF PSVGKSTFLS LITSTASEAA SYEFTTLTCI bmy_19342T0/1-576 KGEGFDVMKS GDARVALIGF PSVGKSTFLS LMTSTASEAA SYEFTTLTCI ENSP00000225729/1-364 KGEGFDVMKS GDARVALIGF PSVGKSTFLS LMTSTASEAA SYEFTTLTCI ENSBTAP00000008544/1-364 KGEGFDVMKS GDARVALIGF PSVGKSTFLS LMTSTASEAA SYEFTTLTCI 101 150 BACU005266/1-457 PGVIEYKGAN IQLLDLPGII EGAAQGKGRG RQVIAVARTA DVVIMMLDAT ENSTTRP00000007702/1-364 PGVIEYKGAN IQLLDLPGII ERAAQGKGRG RQVIAVARTA DVVIMMLDAT bmy_19342T0/1-576 PGVIEYKGAN IQLLDLPGII EGAAQGKGRG RQVIAVARTA DVVIMMLDAT ENSP00000225729/1-364 PGVIEYKGAN IQLLDLPGII EGAAQGKGRG RQVIAVARTA DVIIMMLDAT ENSBTAP00000008544/1-364 PGVIEYKGAN IQLLDLPGII EGAAQGKGRG RQVIAVARTA DVVIMMLDAT 151 200 BACU005266/1-457 KGE------- ---------- ---------- ---------- ---------- ENSTTRP00000007702/1-364 KGEVQ----- ---------- ---------- ---------- ---------- bmy_19342T0/1-576 KGEVQRSAVG AGQADSLGRP CGGNRTLATA RVSLSSWWVV PGVLGPLPRG ENSP00000225729/1-364 KGEVQ----- ---------- ---------- ---------- ---------- ENSBTAP00000008544/1-364 KGEVQ----- ---------- ---------- ---------- ---------- 201 250 BACU005266/1-457 ---------- ---------- ---------- ---------- -GPGCPVAAQ ENSTTRP00000007702/1-364 ---------- ---------- ---------- ---------- ---------- bmy_19342T0/1-576 SSGRTVHGYT QCRRPGAASP RGLCLEDGAV PCHPGSGSCL QGPGCPVAAQ ENSP00000225729/1-364 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008544/1-364 ---------- ---------- ---------- ---------- ---------- 251 300 BACU005266/1-457 SLPGARPHTA EPGSRPGLRL RAQQANLHPG RTPADLPSDR PEGLGLLLST ENSTTRP00000007702/1-364 ---------- ---------- ---------- ---------- ---------- bmy_19342T0/1-576 SLPGARPQTA EPCSRPGLRL RAQQANLHPG RTPADLPSDR PEGLG-LLST ENSP00000225729/1-364 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008544/1-364 ---------- ---------- ---------- ---------- ---------- 301 350 BACU005266/1-457 FGCWEGTFGG WWRVREGRPW RVGAARPAPG TCEGHGGSTR SLLEKELGSV ENSTTRP00000007702/1-364 ---------- ---------- ---------- ---------R SLLEKELGSV bmy_19342T0/1-576 FGCWEGTFGG WWRVREGRPW RVGAARPAPG TCEGHGGSTR SLLEKELGSV ENSP00000225729/1-364 ---------- ---------- ---------- ---------R SLLEKELESV ENSBTAP00000008544/1-364 ---------- ---------- ---------- ---------R SLLEKELESV 351 400 BACU005266/1-457 GIRLNKHKPN IYFKPKKGGG ISFNSTVTLT QCSEKLVQLI LHEY------ ENSTTRP00000007702/1-364 GIRLNKHKPN IYFKPKKGGG ISFNSTVTLT QCSEKLVQLI LHEY-----K bmy_19342T0/1-576 GIRLNKHKPN IYFKPKKGGG ISFNSTVTLT QCSEKLVQLI LHEYXILPEE ENSP00000225729/1-364 GIRLNKHKPN IYFKPKKGGG ISFNSTVTLT QCSEKLVQLI LHEY-----K ENSBTAP00000008544/1-364 GIRLNKHKPN IYFKPKKGGG ISFNSTVTLT QCSEKLVQLI LHEY-----K 401 450 BACU005266/1-457 ----SILPRG ---------- ---------- --VYNKIDQI SMEEVDRLAR ENSTTRP00000007702/1-364 IFNAEVLFRE DCSPDEFIDV IMGNRVYMPC LYVYNKIDQI SMEEVDRLAR bmy_19342T0/1-576 IFNAEVLFRE DCSPDEFIDV LMGNRVYMPC LYVYNKIDQI SMEEVDRLAR ENSP00000225729/1-364 IFNAEVLFRE DCSPDEFIDV IVGNRVYMPC LYVYNKIDQI SMEEVDRLAR ENSBTAP00000008544/1-364 IFNAEVLFRE DCSPDEFIDV IVGNRVYMPC LYVYNKIDQI SMEEVDRLAR 451 500 BACU005266/1-457 KPDSVVISCG MKLNLDYLLE MLWEYLALTC IYTKKRGQRP DFTDAIILRK ENSTTRP00000007702/1-364 KPDSVVISCG MKLNLDYLLE MLWEYLALTC IYTKKRGQRP DFTDAIILRK bmy_19342T0/1-576 KPDSVVISCG MKLNLDYLLE MLWEYLALTC IYTKKRGQRP DFTDAIILRK ENSP00000225729/1-364 KPNSVVISCG MKLNLDYLLE MLWEYLALTC IYTKKRGQRP DFTDAIILRK ENSBTAP00000008544/1-364 KPDSVVISCG MKLNLDYLLE MLWEYLALTC IYTKKRGQRP DFTDAIILRK 501 550 BACU005266/1-457 GASVEHVSTC PGPGCFRAQP GLTIRLSPIP QCHRIHRSLA SQFKYALVWG ENSTTRP00000007702/1-364 GASVEHV--- ---------- ---------- -CHRIHRSLA SQFKYALVWG bmy_19342T0/1-576 GASVEHVSTC PGPGCFRAQP GLTIRLSPVP QCHRIHRSLA SQFKYALVWG ENSP00000225729/1-364 GASVEHV--- ---------- ---------- -CHRIHRSLA SQFKYALVWG ENSBTAP00000008544/1-364 GASVEHV--- ---------- ---------- -CHRIHRSLA SQFKYALVWG 551 600 BACU005266/1-457 TSTKYSPQRV GLTHTMEHED VIQIVKK ENSTTRP00000007702/1-364 TSTKYSPQRV GLTHTMEHED VIQIVKK bmy_19342T0/1-576 TSTKYSPQRV GLTHTMEHED VIQIVKK ENSP00000225729/1-364 TSTKYSPQRV GLTHTMEHED VIQIVKK ENSBTAP00000008544/1-364 TSTKYSPQRV GLTHTMEHED VIQIVKK