KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:35:42 2014 Check: 00 .. Name: ENSTTRP00000002894/1-402 Len: 462 Check: 8483 Weight: 1.00 Name: bmy_07524T0/1-303 Len: 462 Check: 3503 Weight: 1.00 Name: ENSP00000365388/1-415 Len: 462 Check: 6729 Weight: 1.00 Name: ENSBTAP00000008576/1-418 Len: 462 Check: 9108 Weight: 1.00 // 1 50 ENSTTRP00000002894/1-402 --SCW--WRW RRGCSWRPAA RSPGPGSIGR AGLSGLRAAA ASRAQX---- bmy_07524T0/1-303 ---------- ---------- ---------- ---------- ---------- ENSP00000365388/1-415 MASRW--WRW RRGCSWKPAA RSPGPGSPGR AGPLGPSAAA EVRAQVHRRK ENSBTAP00000008576/1-418 MASCWWPWRW RRGCSWRPAA RSPGPNSAGR AALYAPRAAA VAAAAT---V 51 100 ENSTTRP00000002894/1-402 ---------- -XXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_07524T0/1-303 ------MSYF NLVKSLTSAF PNMYSISRFH HMTPAVCCCS KTQSGEKYTD ENSP00000365388/1-415 GLDLSQIPYI NLVKHLTSAC PNVCRISRFH HTTPD----S KTHSGEKYTD ENSBTAP00000008576/1-418 AVARAQMSYC SLMKSLTSAF RNMYGVSRFH HTTPVACCFS ETLSGEKYTD 101 150 ENSTTRP00000002894/1-402 XXXXXXXXXX XXXXXXXXEL FISTTELKDM CEYYFDGKGK AFRPIIVVLM bmy_07524T0/1-303 PFNLGWRDLK GLYEDIRKEL FISTTELKEM CEYYFDGKGK AFRPIIVVLM ENSP00000365388/1-415 PFKLGWRDLK GLYEDIRKEL LISTSELKEM SEYYFDGKGK AFRPIIVALM ENSBTAP00000008576/1-418 PFKIGWRDLK GLYEDIRKEL FISTAELREM SEYHFDGKGK AFRPIIVVLM 151 200 ENSTTRP00000002894/1-402 ARACNIHHNN S--------- ---------- ---------- ---------- bmy_07524T0/1-303 ARACNIHHNN SRRKAPLMFM PQCADPMSSF HKMIAEKVIG GVSVKKHCFL ENSP00000365388/1-415 ARACNIHHNN S--------- ---------- ---------- ---------- ENSBTAP00000008576/1-418 ARACNIHHNN A--------- ---------- ---------- ---------- 201 250 ENSTTRP00000002894/1-402 --RNVQASQR AIALIAEMIH TASLVHDDVI DDASSRRGKH TVNKIWGEKK bmy_07524T0/1-303 LTRNVQASQR AIALIAEMIH TASLVHDDVI DDANSRRGKH TVNKIWGEKK ENSP00000365388/1-415 --RHVQASQR AIALIAEMIH TASLVHDDVI DDASSRRGKH TVNKIWGEKK ENSBTAP00000008576/1-418 --RNVQASQR AIALIAEMIH TASLVHDDII DDASSRRGKH TVNKIWGEKK 251 300 ENSTTRP00000002894/1-402 AVLAGDLILS AASIALARIG NTTVVSILTQ VIEDLVRGEF LQLGSKENEN bmy_07524T0/1-303 AVLAGDLILS AASIALARIG NTAVVSILTQ VIEDLVRGEF LQLGSKENEN ENSP00000365388/1-415 AVLAGDLILS AASIALARIG NTTVISILTQ VIEDLVRGEF LQLGSKENEN ENSBTAP00000008576/1-418 AVLAGDLILS AASIALARIG NTTVISILTQ VIEDLVRGEF LQLGSKENEN 301 350 ENSTTRP00000002894/1-402 ERFAHYLEKT FKKTASLIAN SCKAVSVLGC PDPVVHEIAY QYGKNVGLAF bmy_07524T0/1-303 ERFAHYLEKT FKKTASLIAN SCKAVSL--- ---------- DQGQNRTLEW ENSP00000365388/1-415 ERFAHYLEKT FKKTASLIAN SCKAVSVLGC PDPVVHEIAY QYGKNVGIAF ENSBTAP00000008576/1-418 ERFAHYLEKT FKKTASLIAN SCKAVSVLGC PDPAVHEIAY QYGKNVGIAF 351 400 ENSTTRP00000002894/1-402 QLIDDVLDFT SCSDRMGKPT SADLKLGLAT GPVLFACQQF PEMNAMIMRR bmy_07524T0/1-303 TWVS------ ------GSPS CAP------- -----ACP-- ---------- ENSP00000365388/1-415 QLIDDVLDFT SCSDQMGKPT SADLKLGLAT GPVLFACQQF PEMNAMIMRR ENSBTAP00000008576/1-418 QLIDDVLDFT SCSEQMGKPT SADLKLGLAT GPVLFACQQF PEMNAMIMRR 401 450 ENSTTRP00000002894/1-402 FSSPGDVDRA RQYVLQSDGV QQTTYLAQRY CREAVREISK LRPSPERDAL bmy_07524T0/1-303 ---------- ---------- ---------W TRKRVSS--- ---------- ENSP00000365388/1-415 FSLPGDVDRA RQYVLQSDGV QQTTYLAQQY CHEAIREISK LRPSPERDAL ENSBTAP00000008576/1-418 FGSPGDVDRA LQYVLQSDGV QQTTYLAQRY CHKAVSEISK LRPSPERDAL 451 500 ENSTTRP00000002894/1-402 IQLSEIVLTR DK bmy_07524T0/1-303 ---------- -- ENSP00000365388/1-415 IQLSEIVLTR DK ENSBTAP00000008576/1-418 IQLSEMVLTR DK