KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:45 2014 Check: 00 .. Name: ENSP00000265594/1-725 Len: 725 Check: 4701 Weight: 1.00 Name: ENSBTAP00000008604/1-725 Len: 725 Check: 2835 Weight: 1.00 Name: bmy_12634T0/1-565 Len: 725 Check: 7826 Weight: 1.00 Name: BACU016589/1-725 Len: 725 Check: 1592 Weight: 1.00 Name: ENSTTRP00000015658/1-725 Len: 725 Check: 3340 Weight: 1.00 // 1 50 ENSP00000265594/1-725 MAAASAVSVL LVAAERNRWH RLPSLLLPPR TWVWRQRTMK YTTATGRNIT ENSBTAP00000008604/1-725 MSAASLVSVL LVAAERHRWQ RVPRLLLPPR GWAWKQRTRK YATTTGQNIS bmy_12634T0/1-565 ---------- ---------- ---------- ---------- ---------- BACU016589/1-725 MAAASALSVL LVAAERSRWR RVPSSLLPPR GWTWKQRAMK YATTTGRNIT ENSTTRP00000015658/1-725 MAAASALSVV LVAAERNRWQ RVPSLLLPPR GWTWKQRAMK YATTTGRNIT 51 100 ENSP00000265594/1-725 KVLIANRGEI ACRVMRTAKK LGVQTVAVYS EADRNSMHVD MADEAYSIGP ENSBTAP00000008604/1-725 KVLIANRGEI ACRVIRTAKK MGVQSVAVYS EADRNSMHVD MADEAYLIGP bmy_12634T0/1-565 ---------- ---------- ---------- -MLEDTVHVS LS-------- BACU016589/1-725 KVLIANRGEI ACRVIRTAKK MGVQSVAVYS EADRNSMHVD MADEAHSIGP ENSTTRP00000015658/1-725 KVLIANRGEI ACRVIRTAKK MGVQSVAVYS EADRNSMHVD MADEAHSIGP 101 150 ENSP00000265594/1-725 APSQQSYLSM EKIIQVAKTS AAQAIHPGCG FLSENMEFAE LCKQEGIIFI ENSBTAP00000008604/1-725 APSQQSYLSM EKIIQVAKIS AAQAIHPGYG FLSENMEFAE LCKQEGIIFV bmy_12634T0/1-565 -----SLAVI QLLIFLFCGL ESQAIHPGYG FLSENMEFAE LCKQEGIIFI BACU016589/1-725 APSQQSYLSM EKIIQVAKIS AAQAIHPGYG FLSENMEFAE LCKQEGIIFI ENSTTRP00000015658/1-725 APSQQSYLSM EKIIQVAKIS AAQAIHPGYG FLSENMEFAE LCKQEGIIFI 151 200 ENSP00000265594/1-725 GPPPSAIRDM GIKSTSKSIM AAAGVPVVEG YHGEDQSDQC LKEHARRIGY ENSBTAP00000008604/1-725 GPPSSAIRDM GIKSTSKSIM AAAGVPVVEG YHGEDQSDQC LKEHARTIGY bmy_12634T0/1-565 GPPSSAIRDM GIKSTAKSIM AAAGVPVVEG YHGDDQSDQC LKEHARRIGY BACU016589/1-725 GPPSSAIRDM GIKSTAKSIM AAAGVPVVEG YHGDDQSDQC LKEHARRIGY ENSTTRP00000015658/1-725 GPPSSAIRDM GIKSTAKSIM AAAGVPVVEG YHGEDQSDQC LKEHARRIGY 201 250 ENSP00000265594/1-725 PVMIKAVRGG GGKGMRIVRS EQEFQEQLES ARREAKKSFN DDAMLIEKFV ENSBTAP00000008604/1-725 PVMIKAVRGG GGKGMRIVRS EKEFQEQLES ARREAKKSFN DDAMLIEKFV bmy_12634T0/1-565 PVMIKAIRGG GGKGMRIIRS EKEFQEQLES ARREAKK--- ---------- BACU016589/1-725 PVMIKAVRGG GGKGMRIIRS EKEFQEQLES ARREAKKSFN DDAMLIEKFV ENSTTRP00000015658/1-725 PVMIKAIRGG GGKGMRIIRS EKEFQEQLES ARREAKKSFN DDGMLIEKFV 251 300 ENSP00000265594/1-725 DTPRHVEVQV FGDHHGNAVY LFERDCSVQR RHQKIIEEAP APGIKSEVRK ENSBTAP00000008604/1-725 DTPRHVEVQV FGDHHGNAVY LFERDCSVQR RHQKIIEEAP GPGIKPEVRK bmy_12634T0/1-565 ----HVEVQV FGDHHGNAVY LFERDCSVQR RHQKIIEEAP GPGIKPEVRK BACU016589/1-725 DTPRHVEVQV FGDHHGNAVY LFERDCSVQR RHQKIIEEAP GPGIKPEVRK ENSTTRP00000015658/1-725 DTPRHVEVQV FGDHHGNAVY LFERDCSVQR RHQKIIEEAP GPGIKPEVRK 301 350 ENSP00000265594/1-725 KLGEAAVRAA KAVNYVGAGT VEFIMDSKHN FCFMEMNTRL QVEHPVTEMI ENSBTAP00000008604/1-725 KLGEAAVRAA KAVNYVGAGT VEFIMDSKHN FYFMEMNTRL QVEHPVTEMI bmy_12634T0/1-565 KLGEAAVRAA KAVNYVGAGT VEFIMDSKHN FYFMEMNTRL QVEHPVTEMI BACU016589/1-725 KLGEAAVRAA KAVNYVGAGT VEFIMDSKHN FYFMEMNTRL QVEHPVTEMI ENSTTRP00000015658/1-725 KLGEAAVRAA KAVNYVGAGT VEFIMDSKHN FYFMEMNTRL QVEHPVTEMI 351 400 ENSP00000265594/1-725 TGTDLVEWQL RIAAGEKIPL SQEEITLQGH AFEARIYAED PSNNFMPVAG ENSBTAP00000008604/1-725 TGTDLVEWQL RIAAGEKIPL SQEEITLRGH AFEARIYAED PNNNFMPGAG bmy_12634T0/1-565 TGTDLVEWQL RIAAGEKIPL SQEEITLRGH AFEARIYAED PNNNFMPGAG BACU016589/1-725 TGTDLVEWQL RIAAGEKIPL SQEEITLRGH AFEARIYAED PNNNFMPGAG ENSTTRP00000015658/1-725 TGTDLVEWQL RIAAGEKIPL SQEEITLRGH AFEARIYAED PNNNFMPGAG 401 450 ENSP00000265594/1-725 PLVHLSTPRA DPSTRIETGV RQGDEVSVHY DPMIAKLVVW AADRQAALTK ENSBTAP00000008604/1-725 PLVHLSTPRA DLTTRIETGV RQGDEVSMHY DPMIAKLVVW AADRQAALTK bmy_12634T0/1-565 PLVHLSTPRA DLATRIETGV RQ-------- ---------- --DRQAALTK BACU016589/1-725 PLVHLSTPRA DLATRIETGV RQGDEVSVHY DPMIAKLVVW AADRQAALTK ENSTTRP00000015658/1-725 PLVHLSTPRA DLATRIETGV RQGDEVSVHY DPMIAKLVVW AADRQAALTK 451 500 ENSP00000265594/1-725 LRYSLRQYNI VGLHTNIDFL LNLSGHPEFE AGNVHTDFIP QHHKQLLLSR ENSBTAP00000008604/1-725 LKYSLRQYNI VGLHTNIDFL LSLSGHPEFE AGNVHTDFIA QHRKELLPDR bmy_12634T0/1-565 LRYSLRQYSI VGLHTNIDFL LKLSGHPEFE AGNVHTDFIP QHRKELLPHR BACU016589/1-725 LRYSLRQYSI VGLHTNIDFL LKLSGHPEFE AGNVHTDFIP QHRKELLPHR ENSTTRP00000015658/1-725 LQYSLRQYSI VGLNTNIDFL LKLSGHPEFE AGNVHTDFIP QHRKELLPHR 501 550 ENSP00000265594/1-725 KAAAKESLCQ AALGLILKEK AMTDTFTLQA HDQFSPFSSS SGRRLNISYT ENSBTAP00000008604/1-725 KTTAKEFLCH AALALILKEK AVSDVFKIQT QDQYSPFASS SGRRLNICYS bmy_12634T0/1-565 KTTAKEFLCQ AALGLILKEK AMTDVFKIQT QD-------- ---------- BACU016589/1-725 KTTAKEFLCQ AALGLILKEK AMTDVFKIQT QDQYSPFVSS SGRRLNICFT ENSTTRP00000015658/1-725 KTTAKEFLCQ AALGLILKEK AMTDVFKIQT QDQYSPFVSS SGRRLNICYT 551 600 ENSP00000265594/1-725 RNMTLKDGKN NVAIAVTYNH DGSYSMQIED KTFQVLGNLY SEGDCTYLKC ENSBTAP00000008604/1-725 RNMTLRDGKN NVAIAVTYNR DGSYSMQIED KTFHVLGDLC SEGDCTYLKS bmy_12634T0/1-565 ---------- -VAIAVTYNR DGSHSMQIED KTFHVLGDLC SEGDCTYLKS BACU016589/1-725 RNMTLRDGKN NVAIAVTYNR DGSHSMQIED KTFHVLGDLC SEGDCTYLKS ENSTTRP00000015658/1-725 RSMTLRDGKN NVTIAVTYNR DGSHSMQIED KTFHVLGDLC SEGDCTYLKS 601 650 ENSP00000265594/1-725 SVNGVASKAK LIILENTIYL FSKEGSIEID IPVPKYLSSV SSQETQGGPL ENSBTAP00000008604/1-725 SVNGVASKIK LIILKNTIYL FSMDGSIQIG IPVPRYLSSA SSGETQGGAV bmy_12634T0/1-565 SVNGVASKTK LIILENTIYL FSMDGSIQIG IPVPRYLSSV SSEGTQGGAV BACU016589/1-725 SVNGVASKTK LIILENTIYL FSMDGSIQIG IPVPRYLSSV SSEGTQGGAV ENSTTRP00000015658/1-725 SVNGVASKTK LVILENTIYL FSMDGSIQIG IPVPRYLSAV SSEGTQGGAI 651 700 ENSP00000265594/1-725 APMTGTIEKV FVKAGDKVKA GDSLMVMIAM KMEHTIKSPK DGTVKKVFYR ENSBTAP00000008604/1-725 APMTGTVEKV FVKAGDRVKA GDSLMVMIAM KMEHTIKAPK DGTIKKVFYK bmy_12634T0/1-565 APMTGTVEKV FVKAGDEVKA GDSLMVMIAM KMEHTIKAPK DGTIKKVFYK BACU016589/1-725 APMTGTVEKV FVKAGDKVKA GDSLMVMIAM KMEHTIKAPK DGTIKKVFYE ENSTTRP00000015658/1-725 APMTGTVEKV FVKAGDKVKA GDSLMVMIAM KMEHTIKAPK DGTIKKVFYK 701 750 ENSP00000265594/1-725 EGAQANRHTP LVEFEEEESD KRESE ENSBTAP00000008604/1-725 EGSQANRHAP LVEFEEEDSD EREAD bmy_12634T0/1-565 EGSQANRHAP LVEFEEEESD KREAE BACU016589/1-725 EGAQANRHAP LVEFEEEESD KREAE ENSTTRP00000015658/1-725 EGSQANRHAP LVEFEEEESD KREAE