KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:46 2014 Check: 00 .. Name: ENSP00000249923/1-953 Len: 953 Check: 5477 Weight: 1.00 Name: ENSBTAP00000008616/1-953 Len: 953 Check: 5796 Weight: 1.00 Name: bmy_07190T0/1-910 Len: 953 Check: 9794 Weight: 1.00 Name: ENSTTRP00000003408/1-942 Len: 953 Check: 685 Weight: 1.00 Name: BACU018276/1-953 Len: 953 Check: 6707 Weight: 1.00 // 1 50 ENSP00000249923/1-953 MTAAENVCYT LINVPMDSEP PSEISLKNDL EKGDVKSKTE ALKKVIIMIL ENSBTAP00000008616/1-953 MTAAENVCYT LINVPMDSEP PSEISLKNDL EKGDVKSKTE ALKKVIIMIL bmy_07190T0/1-910 MTAAENVCYT LINVPMDSEP PSEISLKNDL EKGDVKSKTE ALKKVIIMIL ENSTTRP00000003408/1-942 MTAAENVCYT LINVPMDSEP PSEISLKNDL EKGDVKSKTE ALKKVIIMIL BACU018276/1-953 MTAAENVCYT LINVPMDSEP PSEISLKNDL EKGDVKSKTE ALKKVIIMIL 51 100 ENSP00000249923/1-953 NGEKLPGLLM TIIRFVLPLQ DHTIKKLLLV FWEIVPKTTP DGRLLHEMIL ENSBTAP00000008616/1-953 NGEKLPGLLM TIIRFVLPLQ DHTIKKLLLV FWEIVPKTTP DGRLLHEMIL bmy_07190T0/1-910 NGEKLPGLLM TIIRFVLPLQ DHTIKKLLLV FWEIVPKTTP DGRLLHEMIL ENSTTRP00000003408/1-942 NGEKLPGLLM TIIRFVLPLQ DHTIKKLLLV FWEIVPKTTP DGRLLHEMIL BACU018276/1-953 NGEKLPGLLM TIIRFVLPLQ DHTIKKLLLV FWEIVPKTTP DGRLLHEMIL 101 150 ENSP00000249923/1-953 VCDAYRKDLQ HPNEFIRGST LRFLCKLKEA ELLEPLMPAI RACLEHRHSY ENSBTAP00000008616/1-953 VCDAYRKDLQ HPNEFIRGST LRFLCKLKEA ELLEPLMPAI RACLEHRHSY bmy_07190T0/1-910 VCDAYRKDLQ HPNEFIRGST LRFLCKLKEA ELLEPLMPAI RACLEHRHSY ENSTTRP00000003408/1-942 VCDAYRKDLQ HPNEFIRGST LRFLCKLKEA ELLEPLMPAI RACLEHRHSY BACU018276/1-953 VCDAYRKDLQ HPNEFIRGST LRFLCKLKEA ELLEPLMPAI RACLEHRHSY 151 200 ENSP00000249923/1-953 VRRNAVLAIY TIYRNFEHLI PDAPELIHDF LVNEKDASCK RNAFMMLIHA ENSBTAP00000008616/1-953 VRRNAVLAIY TIYRNFEHLI PDAPELIHDF LVNEKDASCK RNAFMMLIHA bmy_07190T0/1-910 VRRNAVLAIY TIYRNFEHLI PDAPELIHDF LVNEKDASCK RNAFMMLIHA ENSTTRP00000003408/1-942 VRRNAVLAIY TIYRNFEHLI PDAPELIHDF LVNEKDASCK RNAFMMLIHA BACU018276/1-953 VRRNAVLAIY TIYRNFEHLI PDAPELIHDF LVNEKDASCK RNAFMMLIHA 201 250 ENSP00000249923/1-953 DQDRALDYLS TCIDQVQTFG DILQLVIVEL IYKVCHANPS ERARFIRCIY ENSBTAP00000008616/1-953 DQDRALDYLS TCIDQVQTFG DILQLVIVEL IYKVCHANPS ERARFIRCIY bmy_07190T0/1-910 DQ-------- ---------- ---------- ---VCHANPS ERARFIRCIY ENSTTRP00000003408/1-942 DQDRALDYLS TCIDQVQTFG DILQLVIVEL IYKVCHANPS ERARFIRCIY BACU018276/1-953 DQDRALDYLS TCIDQVQTFG DILQLVIVEL IYKVCHANPS ERARFIRCIY 251 300 ENSP00000249923/1-953 NLLQSSSPAV KYEAAGTLVT LSSAPTAIKA AAQCYIDLII KESDNNVKLI ENSBTAP00000008616/1-953 NLLQSSSPAV KYEAAGTLVT LSSAPTAIKA AAQCYIDLII KESDNNVKLI bmy_07190T0/1-910 NLLQSSSPAV KYEAAGTLVT LSSAPTA--- ---------I KESDNNVKLI ENSTTRP00000003408/1-942 NLLQSSSPAV KYEAAGTLVT LSSAPTAIKA AAQCYIDLII KESDNNVKLI BACU018276/1-953 NLLQSSSPAV KYEAAGTLVT LSSAPTAIKA AAQCYIDLII KESDNNVKLI 301 350 ENSP00000249923/1-953 VLDRLIELKE HPAHERVLQD LVMDILRVLS TPDLEVRKKT LQLALDLVSS ENSBTAP00000008616/1-953 VLDRLIELKE HPAHERVLQD LVMDILRVLS TPDLEVRKKT LQLALDLVSS bmy_07190T0/1-910 VLDRLIELKE HPAHERVLQD LVMDILRVLS TPDLEVRKKT LQLALDLVSS ENSTTRP00000003408/1-942 VLDRLIELKE HPAHERVLQD LVMDILRVLS TPDLEVRKKT LQLALDLVSS BACU018276/1-953 VLDRLIELKE HPAHERVLQD LVMDILRVLS TPDLEVRKKT LQLALDLVSS 351 400 ENSP00000249923/1-953 RNVEELVIVL KKEVIKTNNV SEHEDTDKYR QLLVRTLHSC SVRFPDMAAN ENSBTAP00000008616/1-953 RNVEELVIVL KKEVIKTNNV SEHEDTDKYR QLLVRTLHSC SVRFPDMAAN bmy_07190T0/1-910 RNVEELVIVL KKEVIKTNNV SEHEDTDKYR QLLVRTLHSC SVRFPDMAAN ENSTTRP00000003408/1-942 RNVEELVIVL KKEVIKTNNV SEHEDTDKYR QLLVRTLHSC SVRFPDMAAN BACU018276/1-953 RNVEELVIVL KKEVIKTNNV SEHEDTDKYR QLLVRTLHSC SVRFPDMAAN 401 450 ENSP00000249923/1-953 VIPVLMEFLS DNNEAAAADV LEFVREAIQR FDNLRMLIVE KMLEVFHAIK ENSBTAP00000008616/1-953 VIPVLMEFLS DSNEAAAADV LEFVREAIQR FDNLRMLIVE KMLEVFHAIK bmy_07190T0/1-910 VIPVLMEFLS DSNEAAAADV LEFVREAIQR FDNLRMLIVE KMLEVFHAIK ENSTTRP00000003408/1-942 VIPVLMEFLS DSNEAAAADV LEFVREAIQR FDNLRMLIVE KMLEVFHAIK BACU018276/1-953 VIPVLMEFLS DSNEAAAADV LEFVREAIQR FDNLRMLIVE KMLEVFHAIK 451 500 ENSP00000249923/1-953 SVKIYRGALW ILGEYCSTKE DIQSVMTEIR RSLGEIPIVE SEIKKEAGEL ENSBTAP00000008616/1-953 SVKIYRGALW ILGEYCSTKD DIQSVMTEVR RSLGEIPIVE SEIKKEAGEL bmy_07190T0/1-910 SVKIYRGALW ILGEYCSTKE DIQSVMTEVR RSLGEIPIVE SEIKKEAGEL ENSTTRP00000003408/1-942 SVKIYRGALW ILGEYCSTKE DIQSVMTEVR RSLGEIPIVE SEIKKEAGEL BACU018276/1-953 SVKIYRGALW ILGEYCSTKE DIQSVMTEVR RSLGEIPIVE SEIKKEAGEL 501 550 ENSP00000249923/1-953 KPEEEITVGP VQKLVTEMGT YATQSALSSS RPTKKEEDRP PLRGFLLDGD ENSBTAP00000008616/1-953 KPEEEITVGP VQKLVTEMGT YATQSALSSS RPTKKEEERP PLRGFLLDGD bmy_07190T0/1-910 KPEEEITVGP VQKLVTEMGT YATQSALSSS RPTKKEEERP PLRGFLLDGD ENSTTRP00000003408/1-942 KPEEEITVGP VQKLVTEMGT YATQSALSSS RPTKKEEE-- ---------D BACU018276/1-953 KPEEEITVGP VQKLVTEMGT YATQSALSSS RPTKKEEERP PLRGFLLDGD 551 600 ENSP00000249923/1-953 FFVAASLATT LTKIALRYVA LVQEKKKQNS FVAEAMLLMA TILHLGKSSL ENSBTAP00000008616/1-953 FFVAASLATT LTKIALRYVA LVQEKKKQNS FVAEAMLLMA TILHLGKSSL bmy_07190T0/1-910 FFVAASLATT LTKVALRYVA LVQEKKKQNS FVAEAMLLMA TILHLGKSSL ENSTTRP00000003408/1-942 FFVAASLATT LTKVALRYVA LVQEKKKQNS FVAEAMLLMA TILHLGKSSL BACU018276/1-953 FFVAASLATT LTKVALRYVA LVQEKKKQNS FVAEAMLLMA TILHLGKSSL 601 650 ENSP00000249923/1-953 PKKPITDDDV DRISLCLKVL SECSPLMNDI FNKECRQSLS HMLSAKLEEE ENSBTAP00000008616/1-953 PKKPITDDDV DRISLCLKVL SECSPLMNDI FNKECRQSLS HMLSAKLEEE bmy_07190T0/1-910 PKKPITDDDV DRISLCLKVL SECSPLMNDI FNKECRQSLS HMLSAKLEEE ENSTTRP00000003408/1-942 PKKPITDDDV DRISLCLKVL SECSPLMNDI FNKECRQSLS HMLSAKLEEE BACU018276/1-953 PKKPITDDDV DRISLCLKVL SECSPLMNDI FNKECRQSLS HMLSAKLEEE 651 700 ENSP00000249923/1-953 KLSQKKESEK RNVTVQPDDP ISFMQLTAKN EMNCKEDQFQ LSLLAAMGNT ENSBTAP00000008616/1-953 KLSQKKESEK RNVTVQPDDP ISFMQLTAKN EMNCKEDQFQ LSLLAAMGNT bmy_07190T0/1-910 KLSQKKESEK RNVTVQPDDP ISFVQLTAKN EMNCKEDQFQ LSLLAAMGNT ENSTTRP00000003408/1-942 KLSQKKESEK RNVTVQPDDP ISFMQLTAKN EMNCKEDQFQ LSLLAAMGNT BACU018276/1-953 KLSQKKESEK RNVTVQPDDP ISFMQLTAKN EMNCKEDQFQ LSLLAAMGNT 701 750 ENSP00000249923/1-953 QRKEAADPLA SKLNKVTQLT GFSDPVYAEA YVHVNQYDIV LDVLVVNQTS ENSBTAP00000008616/1-953 QRKEAADPLA SKLNKVTQLT GFSDPVYAEA YVHVNQYDIV LDVLVVNQTS bmy_07190T0/1-910 QRKEAADPLA SKLNKVTQLT GFSDPVYAEA YVHVNQYDIV LDVLVVNQTS ENSTTRP00000003408/1-942 QRKEAADPLA SILNKVTQLT GFSDPVYAEA YVHVNQYDIV LDVLVVNQTS BACU018276/1-953 QRKEAADPLA SKLNKVTQLT GFSDPVYAEA YVHVNQYDIV LDVLVVNQTS 751 800 ENSP00000249923/1-953 DTLQNCTLEL ATLGDLKLVE KPSPLTLAPH DFANIKANVK VASTENGIIF ENSBTAP00000008616/1-953 DTLQNCTLEL ATLGDLKLVE KPSPLTLAPH DFANIKANVK VASTENGIIF bmy_07190T0/1-910 DTLQNCTLEL ATLGDLKLVE KPSPLTLAPH DFANIKANVK VASTENGIIF ENSTTRP00000003408/1-942 DTLQNCTLEL ATLGDLKLVE KPSPLTLAPH DFANIKANVK VASTENGIIF BACU018276/1-953 DTLQNCTLEL ATLGDLKLVE KPSPLTLAPH DFANIKANVK VASTENGIIF 801 850 ENSP00000249923/1-953 GNIVYDVSGA ASDRNCVVLS DIHIDIMDYI QPATCTDAEF RQMWAEFEWE ENSBTAP00000008616/1-953 GNIVYDVSGA ASDRNCVVLS DIHIDIMDYI QPATCTDAEF RQMWAEFEWE bmy_07190T0/1-910 GNIVYDVSGA ASDRNCVVLS DIHIDIMDYI QPATCTDAEF RQMWAEFEWE ENSTTRP00000003408/1-942 GNIVYDVSGA ASDRNCVVLS DIHIDIMDYI QPATCTDAEF RQMWAEFEWE BACU018276/1-953 GNIVYDVSGA ASDRNCVVLS DIHIDIMDYI QPATCTDAEF RQMWAEFEWE 851 900 ENSP00000249923/1-953 NKVTVNTNMV DLNDYLQHIL KSTNMKCLTP EKALSGYCGF MAANLYARSI ENSBTAP00000008616/1-953 NKVTVNTNIV DLNDYLQHIL KSTNMKCLTP EKALSGYCGF MAANLYARSI bmy_07190T0/1-910 NKVTVNTNIV DLNDYLQHIL KSTNMKCLTP EKALSGYCGF MAANLYARSI ENSTTRP00000003408/1-942 NKVTVNTNIV DLNDYLQHIL KSTNMKCLTP EKALSGYCGF MAANLYARSI BACU018276/1-953 NKVTVNTNIV DLNDYLQHIL KSTNMKCLTP EKALSGYCGF MAANLYARSI 901 950 ENSP00000249923/1-953 FGEDALANVS IEKPIHQGPD AAVTGHIRIR AKSQGMALSL GDKINLSQKK ENSBTAP00000008616/1-953 FGEDALANVS IEKPIQQGPE APVTGHIRIR AKSQGMALSL GDKINLSQKK bmy_07190T0/1-910 FGEDALANVS IEKPIQQGPE APVTGHIRIR AKSQGMALSL GDKINLSQKK ENSTTRP00000003408/1-942 FGEDALANVS IEKPIQQGPE APVTGHIRIR AKSQGMALSL GDKINLSQKK BACU018276/1-953 FGEDALANVS IEKPIQQGPE APVTGHIRIR AKSQGMALSL GDKINLSQKK 951 1000 ENSP00000249923/1-953 TSI ENSBTAP00000008616/1-953 NSI bmy_07190T0/1-910 TSI ENSTTRP00000003408/1-942 TSI BACU018276/1-953 TSI