KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:49 2014 Check: 00 .. Name: ENSP00000248933/1-1024 Len: 1046 Check: 3949 Weight: 1.00 Name: ENSBTAP00000008629/1-1033 Len: 1046 Check: 190 Weight: 1.00 Name: ENSTTRP00000015569/1-1025 Len: 1046 Check: 939 Weight: 1.00 Name: BACU008827/1-962 Len: 1046 Check: 5294 Weight: 1.00 Name: bmy_19214T0/1-668 Len: 1046 Check: 247 Weight: 1.00 // 1 50 ENSP00000248933/1-1024 MPAARPPAAG LRGISLFLAL LLGSPAAALE RDALPEGDAS PLGPYLLPSG ENSBTAP00000008629/1-1033 VPLFHPPQPG LQGLPTLLCS LTRSLVQYLV KNEPPEGDAG QSDTYLLPSE ENSTTRP00000015569/1-1025 MPAARPPAAG LGRIALLLAL LLGSPAAAPA EDAPLEGDAG PSGTYFLPLE BACU008827/1-962 ---------- ---------- ---------- ---------- ---------- bmy_19214T0/1-668 MSASAPVPSS AWNVHWL--- ---------- -DAPLEGDAG PSGTYFLPSE 51 100 ENSP00000248933/1-1024 APERGSPGKE HPEERVVTAP PSSSQSAEVL GELVLDGTAP SAHHDIPALS ENSBTAP00000008629/1-1033 ILGSSSLSKE NPEESVTTAP LNPVQSGDEL REPELEGTVP FAPQDPAAVS ENSTTRP00000015569/1-1025 ALGSSSLSHE TPKERVTTAP LNPAQSGDEL HKPELEGMVP SAPQDSAAAS BACU008827/1-962 ---------- ---------- ---------- ----MEGMVP SAPQDPAAAS bmy_19214T0/1-668 ALGSSSLSQE TPKERVTTAP LNPAQSGDEL RKPELEGMVP SAPQDPAAAS 101 150 ENSP00000248933/1-1024 PL--LPEEAR PKHALPPKKK LPSLKQVNSA RKQLRPKATS AATVQRAGSQ ENSBTAP00000008629/1-1033 TLLPLPEEPG TRHSFPARKK PPSLKQVNSA RKQLRPKATP AAATQRTASQ ENSTTRP00000015569/1-1025 MLLPLPEEPG TGHAFPPTKK PPSLKQVNLT RRQLRPKATT AAAVQRAASQ BACU008827/1-962 MLLPLPEEPG TRHAFPPTKK PPSLKQVNLT RKQLRPKATT AAAVQRAASQ bmy_19214T0/1-668 MLLPLPEEPG TRHAFPPTKK TPSLKQVNLT RKQLRPKATT TAAVQRAASP 151 200 ENSP00000248933/1-1024 PASQGLDLLS SSTEKPGPPG DPDPIVASEE -------ASE VPLWLDRKES ENSBTAP00000008629/1-1033 PASPG-PVLS IAPGKPRPPG DQDPMASAGE ETRPLSLSSE EPLWLERKEG ENSTTRP00000015569/1-1025 PASSDLVLLS SATEKLRPPG DQDPVASAG- -------ASE EPLWLEQKEG BACU008827/1-962 PASSGLGLLS SATEKPRPLG DHDPVASAGE ETHPLSLSSE EPLWLERKEG bmy_19214T0/1-668 PASSGLGLLS SATEKPRPPG DQDPVASAGE ETHPLSLSSE EPLWLEWKEG 201 250 ENSP00000248933/1-1024 AVPTTPAPLQ ISPFTSQPYV AHTLPQRPEP GEPG-PDMAQ EAPQEDTSPM ENSBTAP00000008629/1-1033 AVPTTPAPLQ IAPFTSQPLV AHTLPRSPDP GAPAVPEEAP EAPPEDASPV ENSTTRP00000015569/1-1025 AVPTTPAPLQ IAPFTSQPLV AHTLPQSPDP GAPAVPEEAH EAPPGDASPM BACU008827/1-962 AVPTTPAPLQ IAPFTSQPLV AHTLPQSPDS GAPAVPEEAH EAPPGDASPM bmy_19214T0/1-668 AVPTTPAPLQ IAPFTSQPLV AHTLPQSPDP GAPAVPEEAH EAPPGDASPM 251 300 ENSP00000248933/1-1024 ALMDKGENEL TGSASEESQE TTTSTIITTT VITTEQAPAL CSVSFSNPEG ENSBTAP00000008629/1-1033 TVMDKGETEL TGSASEESQE TTTSTIITTT VITTEQAPAL CSVSFSDPEG ENSTTRP00000015569/1-1025 TLMDKCENEL TGSASEESQE TTTSTIITTT VITTEQAPAL CSVSFSDPEG BACU008827/1-962 TLMDKCENEL TGSASEESQE TTTSTIVTTT VITTEQAPAL CSVSFSDPEG bmy_19214T0/1-668 TLMDKCENEL TGSASEENQE TTTSTIVTTT VITTEQAPAL CSVSFFDPEG 301 350 ENSP00000248933/1-1024 YIDSSDYPLL PLNNFLECTY NVTVYTGYGV ELQVKSVNLS DGELLSIRGV ENSBTAP00000008629/1-1033 YIDSSDYPPL PLNNFLECTY NATVYTGYGV ELQVKSVNLS EGELLSIRGV ENSTTRP00000015569/1-1025 YIDSSDYPPL PLNNFLECTY NVTVYTGYGV ELQVKSVNLS EGELLSIRGV BACU008827/1-962 YIDSSDYPPL PLNNFLECTY NVTVYTGYGV ELQVKSVNLS EGELLSIRGV bmy_19214T0/1-668 YIDSSDYPPL PLNNFLECTY NVTVYTGYGV ELQVKSVNLS EGELLSIRGV 351 400 ENSP00000248933/1-1024 DGPTLTVLAN QTLLVEGQVI RSPTNTISVY FRTFQDDGLG TFQLHYQAFM ENSBTAP00000008629/1-1033 DGPSLTVLAN HTLLVEGQVI RSPTNTISVY FRTFQDDGLG TFQLHYQAFM ENSTTRP00000015569/1-1025 DGPSLTILAN HTLLVEGQVI RSPTNTISVY FRTFQDDGLG TFQLHYQAFM BACU008827/1-962 DGPSLTILAN HTLLVEGQVI RSPTNTISVY FRTFQDDGLG TFQLHYQAFM bmy_19214T0/1-668 DGPSLTILAN HTLLVEGQVI RSPTNTISVY FRTFQDDGLG TFQLHYQAFM 401 450 ENSP00000248933/1-1024 LSCNFPRRPD SGDVTVMDLH SGGVAHFHCH LGYELQGAKM LTCINASKPH ENSBTAP00000008629/1-1033 LSCSFPRRPD FGDVTVMDLH SGGEAHFHCH LGYELQGAKT LTCINASKPH ENSTTRP00000015569/1-1025 LSCNFPRRPD YGDVMVMDLH SGGVAHFHCH LGYELQGAKT LTCINASKPH BACU008827/1-962 LSCNFPRRPD YGDVMVMDLH SGGVAHFHCH LGYELQGAKT LTCINASKPH bmy_19214T0/1-668 LSCNFPRRPD YGDVMVMDLH SGGVAHFHCH LGYELQGAKT LTCINASKPH 451 500 ENSP00000248933/1-1024 WSSQEPICSA PCGGAVHNAT IGRVLSPSYP ENTNGSQFCI WTIEAPEGQK ENSBTAP00000008629/1-1033 WSSREPICSA PCGGAVHNAT IGRVLSPSHS ANASGSQFCV WTIEAPEGQK ENSTTRP00000015569/1-1025 WSSQEPICSA PCGGAVHNAT IGRVLSPSHS GNTNGSQFCV WTIEAPEGQK BACU008827/1-962 WSSQEPICSA PCGGAVHNAT IGRVLSPSHS GNTNGSQVCM WTIEAPEGQK bmy_19214T0/1-668 WSSQEPICSA PCGGAVHNAT IGRVLSPSHS GNTNGSQVCM WTIEAPEGQK 501 550 ENSP00000248933/1-1024 LHLHFERLLL HDKDRMTVHS GQTNKSALLY DSLQTESVPF EGLLSEGNTI ENSBTAP00000008629/1-1033 LHLHFERLAL HKRDRMMVYS GLTNKSTLLY DSFQTENVPF EGLLSDGHTI ENSTTRP00000015569/1-1025 LHLHFEKLSL HEKDRMMVYS GLTNKSTLLY DSLQTENVPF EGLLSDGHTI BACU008827/1-962 LHLHFERLSL HEKDRMMVYS GLTNKSALLY DSLQTENVPF EGLLSDGHTI bmy_19214T0/1-668 LHLHFERLSL HEKDRMMVYS GLTNKSALLY DSLQTENVPF EGLLSDGHTI 551 600 ENSP00000248933/1-1024 RIEFTSDQAR AASTFNIRFE AFEKGHCYEP YIQNGNFTTS DPTYNIGTIV ENSBTAP00000008629/1-1033 RIEFTSNQPP AASAFNIRFE AFEKGHCYEP YIQNGNFTTS DPTYNIGTIV ENSTTRP00000015569/1-1025 CIEFTSDQGR VASAFNIRFE AFEKGHCYEP YIQNGNFTTS DPTYNIGTIV BACU008827/1-962 CIEFTSDQGR VASAFNIRFE AFEKGHCYEP YIQNGNFTTS DPTYNIGTIV bmy_19214T0/1-668 CIEFTSDQGR VASAFNIRFE AFEKGHCYEP YIQNGNFTTS DPTYNIGTIV 601 650 ENSP00000248933/1-1024 EFTCDPGHSL EQGPAIIECI NVRDPYWNDT EPLCRAMCGG ELSAVAGVVL ENSBTAP00000008629/1-1033 EFTCDPGHSL EQGPAIIECI NVRDPYWNDT EPLCRAMCGG ELSAVAGVVL ENSTTRP00000015569/1-1025 EFTCDPGHSL EQ-PAIIECI NVRDPYWNDT EPLCRAMCGG ELSAVAGVVL BACU008827/1-962 EFTCDPGHSL EQGPAIIECI NVRDPYWNDT EPLCRAMCGG ELSAVAGVVL bmy_19214T0/1-668 EFTCDPGHSL EQGPAIIECI NVRDPYWNDT EPLCRAMCGG ELSAVAGVVL 651 700 ENSP00000248933/1-1024 SPNWPEPYVE GEDCIWKIHV GEEKRIFLDI QFLNLSNSDI LTIYDGDEVM ENSBTAP00000008629/1-1033 SPNWPEPYVE GEDCVWKIHV GEEKRIFLDI QFLNLSNSDI LTIYDGDEVM ENSTTRP00000015569/1-1025 SPNWPEPYVE GEDCVWKIHV GEEKRIFLDI QXXXXXXXXX XTIYDGDEVM BACU008827/1-962 SPNWPEPYVE GEDCVWKIHV GEEKRIFLDI QFLNLSNSDI LTIYDGDEVM bmy_19214T0/1-668 SPNWPEPYVE GEDCVWKIHV GEEKRIFLDI QL-------- ---------- 701 750 ENSP00000248933/1-1024 PHILGQYLGN SGPQKLYSST PDLTIQFHSD PAGLIFGKGQ GFIMNYIEVS ENSBTAP00000008629/1-1033 PHILGQYLGN SGPQKLYSST PDLTIQFHSD PAGLIFGKGQ GFIMNYIEVS ENSTTRP00000015569/1-1025 PHILGQYLGN SGPQKLYSST PDLTIQFHSD PAGLIFGKGQ GFIMNYIEVS BACU008827/1-962 PHILGQYLGN SGPQKLYSST PDLTIQFHSD PAGLIFGKGQ GFIMNYIEVS bmy_19214T0/1-668 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000248933/1-1024 RNDSCSDLPE IQNGWKTTSH TELVRGARIT YQCDPGYDIV GSDTLTCQWD ENSBTAP00000008629/1-1033 RNDSCSDLPE IQNGWKTTSH TELVRGARIT YQCDPGYDIV GSDTLTCQWD ENSTTRP00000015569/1-1025 RNDSCSDLPE IQNGWKTTSH TELVRGARIT YQCDPGYDIV GSDTLTCQWD BACU008827/1-962 RNDSCSDLPE IQNGWKTTSH TELVRGARIT YQCDPGYDIV GSDTLTCQWD bmy_19214T0/1-668 ---------- ---------- ---------- ---------- ---------- 801 850 ENSP00000248933/1-1024 LSWSSDPPFC EKIMYCTDPG EVDHSTRLIS DPVLLVGTTI QYTCNPGFVL ENSBTAP00000008629/1-1033 LSWSSDPPFC EKIMYCTDPG EVDHSTRLIS DPVLLVGTTI QYTCNPGFVL ENSTTRP00000015569/1-1025 LSWSSDPPFC EKIMYCTDPG EVDHSTRLIS DPVLLVGTTI QYTCNTGFVL BACU008827/1-962 LSWSSDPPFC EKIMYCTDPG EVDHSTRLIS DPVLLVGTTI QYTCNTGFVL bmy_19214T0/1-668 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000248933/1-1024 EGSSLLTCYS RETGTPIWTS RLPHCVSEES LACDNPGLPE NGYQILYKRL ENSBTAP00000008629/1-1033 EGSSLLTCYS RETGTPIWTS RLPHCVSEES LACDNPGLPE NGYQILYKRL ENSTTRP00000015569/1-1025 EGSSLLTCYS RETGTPIWTS RLPHCVSEES LACDNPGLPE NGYQILYKRL BACU008827/1-962 EGSSLLTCYS RETGTPIWTS RLPHCVSEES LACDNPGLPE NGYQILYKRL bmy_19214T0/1-668 ---------- ---------- ---------- ---------- ---------- 901 950 ENSP00000248933/1-1024 YLPGESLTFM CYEGFELMGE VTIRCILGQP SHWNGPLPVC KVNQDSFEHA ENSBTAP00000008629/1-1033 YLPGESLTFM CYEGFELMGE VTIRCILGQP SHWNGPLPVC KVNQDSFEHA ENSTTRP00000015569/1-1025 YLPGESLTFM CYEGFELMGD VIIPCILGQP SPWNGPLPXX XXNQDSFEHA BACU008827/1-962 YLPGESLTFM CYEGFELMGE VTIRCILGQP SHWNGPLPVC KVNQDSFEHA bmy_19214T0/1-668 ---------- ---------- ---------- ---------- ---------- 951 1000 ENSP00000248933/1-1024 LEVAEAAAET SLEGGNMALA IFIPVLIISL LLGGAYIYIT RCRYYSNLRL ENSBTAP00000008629/1-1033 LEVAEAAAET SLEGGNMALA IFIPVLIISL LLGGAYIYIT RCRYYSNLRL ENSTTRP00000015569/1-1025 LEVAEAAAET SLEGGNVALA IFIPALLISL LLGGAYIYIT RCRYYSNLRL BACU008827/1-962 LEVAEAAAET SLEGGNMALA IFIPVLIISL LLGGAYIYIT RCRYYSNLRL bmy_19214T0/1-668 ---------- ---------- ---------- ---------- ---------- 1001 1050 ENSP00000248933/1-1024 PLMYSHPYSQ ITVETEFDNP IYETGETR-- ---------E YEVSI- ENSBTAP00000008629/1-1033 PLMYSHPYSQ ITVETEFDNP IYETGETR-- ---------E YEVSI- ENSTTRP00000015569/1-1025 PLMYSHPYSQ ITVETEFDNP IYETGETR-- ---------E YEVSI- BACU008827/1-962 PLMYSHPYSQ ITVETEFDNP IYETGKVKLA MSEKAPEGGN FATDFS bmy_19214T0/1-668 ---------- ---------- ---------- ---------- ------