KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:50 2014 Check: 00 .. Name: ENSTTRP00000007163/1-539 Len: 873 Check: 5986 Weight: 1.00 Name: ENSBTAP00000008634/1-537 Len: 873 Check: 5827 Weight: 1.00 Name: ENSP00000360797/1-536 Len: 873 Check: 345 Weight: 1.00 Name: bmy_14805T0/1-837 Len: 873 Check: 5879 Weight: 1.00 Name: BACU016135/1-491 Len: 873 Check: 1358 Weight: 1.00 // 1 50 ENSTTRP00000007163/1-539 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008634/1-537 ---------- ---------- ---------- ---------- ---------- ENSP00000360797/1-536 ---------- ---------- ---------- ---------- ---------- bmy_14805T0/1-837 MGGRGGLLPL LAAPLLDAPG LGSWSGSAQS PGGRGAGLAP GNACCSAAAS BACU016135/1-491 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000007163/1-539 ---------M SDYENEDECW SALEGFRVKL ISIIDPARIT PYLRQCKVLN ENSBTAP00000008634/1-537 ---------M SDYENEDACW SALEGFRVKL ISAIDPARVT PYLRQCNVLS ENSP00000360797/1-536 ---------M SDYENDDECW SVLEGFRVTL TSVIDPSRIT PYLRQCKVLN bmy_14805T0/1-837 LPAACPDYAM SDYENEDECW SALEGFRVKL ISIIDPARIT PYLRQCKVLN BACU016135/1-491 ---------M SDYENEDECW SALEGFRVKL ISIIDPARIT PYLRQCKVLN 101 150 ENSTTRP00000007163/1-539 PDDEEQVLSD PSLVIRKRKV GVLLDILQRT GHKGYVAFLE SLELYYPQLY ENSBTAP00000008634/1-537 PDDEEQVLSD PSLVTRKRKV GVLLDILQRT GHKGYVAFLE SLELYYPQLY ENSP00000360797/1-536 PDDEEQVLSD PNLVIRKRKV GVLLDILQRT GHKGYVAFLE SLELYYPQLY bmy_14805T0/1-837 PDDEEQVLSD PSLVIRKRKV GVLLDILQRT GHKGYVAFLE SLELYYPQLY BACU016135/1-491 PDDEEQVLSD PSLVIRKRKV GVLLDILQRT GHKGYVAFLE SLELYYPQLY 151 200 ENSTTRP00000007163/1-539 RKVTGKEPTR VFSMIIDASG ESGLMQLLMS EVMKLQKKVQ DLTARLGSKD ENSBTAP00000008634/1-537 RKVTGKEPTR VFSVIIDASG ESGLTQLLMS EVMKLQRKVQ ELTALLGSRD ENSP00000360797/1-536 KKVTGKEPAR VFSMIIDASG ESGLTQLLMT EVMKLQKKVQ DLTALLSSKD bmy_14805T0/1-837 RKVTGKEPTR VFSMIIDASG ESGLMQLLMS EVMKLQKKVQ DLTALLGSKD BACU016135/1-491 RKVPGKEPTR VFSMIIDASG ESGLMQLLMS EVMKLQKKVQ DLTALLGSKD 201 250 ENSTTRP00000007163/1-539 DLVKELRVKD SLLRQHQERV QRLKEACEVG GRELQRCKDE NYDLALRLAR ENSBTAP00000008634/1-537 DLAEELRVKD SLLRKLQERV QRLKEACEAG SRELQRCKDE NYDLALRLAR ENSP00000360797/1-536 DFIKELRVKD SLLRKHQERV QRLKEECEAG SRELKRCKEE NYDLAMRLAH bmy_14805T0/1-837 DLVQELRVKD SLLRKHQERV QRLKEACEVG GRELQRCKDE NYDLALRLAR BACU016135/1-491 DLIKELRVKD SLLRKHQERV QRLKEACEVG GRELQRCKDE NYDLALRLAR 251 300 ENSTTRP00000007163/1-539 QSEERGAALM RNRDLQLEID RLRHSLMKAE DECSVERRHT LKLKHAMEQR ENSBTAP00000008634/1-537 QSEERDAALT GHRGLLLEID RLKHSLMRAE DDCRVERKHT LKLRHAMELR ENSP00000360797/1-536 QSEEKGAALM RNRDLQLEID QLKHSLMKAE DDCKVERKHT LKLRHAMEQR bmy_14805T0/1-837 QSEERGAALM RNRDLQLEVD RLKHSLMKAE DDCSVERKHT LKLRRAMEQR BACU016135/1-491 QSEERGAALM RNRDLQLE-- ---------- ---------- ---------- 301 350 ENSTTRP00000007163/1-539 PSHELLWELQ QEKALLQARV QELQASVQEG KPDQSSPYIQ VLGEDWRQAQ ENSBTAP00000008634/1-537 PSQELLWELQ QEKALLQARV QGLEASVQEG KADPGRPHVQ VPEEDWQRVQ ENSP00000360797/1-536 PSQELLWELQ QEKALLQARV QELEASVQEG KLDRSSPYIQ VLEEDWRQAL bmy_14805T0/1-837 PSQELLWELQ QEKALLQARL R--------- ---------- ---------- BACU016135/1-491 ---------- ---------- ---------- ---------- ---------- 351 400 ENSTTRP00000007163/1-539 RDLQEQTATI FSLRKELRQA EALRARCTEE KEMFELQCLA LRKDSKMYKD ENSBTAP00000008634/1-537 RDLQQQAATI FSLRKDLRQA EALRTRSAEE KETLELQCLA LRRDSKMYKD ENSP00000360797/1-536 RDHQEQANTI FSLRKDLRQG EARRLRCMEE KEMFELQCLA LRKDSKMYKD bmy_14805T0/1-837 -------SGG LGRRGRRRSA NCRLPQCTEE KEMFELQCLA LRKDSKMYKE BACU016135/1-491 ---------- ---------- ------CTEE KEMFELQCLA LRKDSKMYKE 401 450 ENSTTRP00000007163/1-539 RIEAILQQME EVAIERDQXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000008634/1-537 RIEAILQQME EVAIERDQAT LMREDIKRSM HAACRTR-TR RKQVRELSEK ENSP00000360797/1-536 RIEAILLQME EVAIERDQAI ATREELHAQH ARGLQEKDAL RKQVRELGEK bmy_14805T0/1-837 RIEAILQQMG EVAVERDQAI TTREELHAQH ARSLQDKDAL RKRVRELSEK BACU016135/1-491 RIEAILQQMG EVAVERDQAI ATREELHARH ARSLQDKDAL RKRVRELSEK 451 500 ENSTTRP00000007163/1-539 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXLSLP ENSBTAP00000008634/1-537 VDELQLQLFQ REGQLLAVEG KLRRRQLDAL ILSSDLEDSS PRNSQEFLLP ENSP00000360797/1-536 ADELQLQVFQ CEAQLLAVEG RLRRQQLETL VLSSDLEDGS PRRSQELSLP bmy_14805T0/1-837 VDELQLQLFQ REGQLLAVEG RLRWQQLETS VLSSDLEDGS PRNSQELSLP BACU016135/1-491 VDELQLQLFQ REGQLLAVEG RLRWQQLETS VLSSDLEDGS PRNSQE---- 501 550 ENSTTRP00000007163/1-539 QDIEEDAQLS DKGGPAIGES PEQPFVALQK ERLSLAPKDA G--------- ENSBTAP00000008634/1-537 QDL-EDTQLS DKGSLAIGES PEQPSVALQE EQLSLTPEDA G--------- ENSP00000360797/1-536 QDL-EDTQLS DKGCLAGGGS PKQPFAALHQ EQVLRNPHDA G--------- bmy_14805T0/1-837 QDLEEDAQLS DKGGPAIGES PEQPFVALEK ERLSLTPEEA GPQEDAARRE BACU016135/1-491 -DLEEDAQLS DKGGPAIGES PEQPSVALQK ERLSLTPEDA G--------- 551 600 ENSTTRP00000007163/1-539 ---------- ---------- ---------- LSGGEPPEKE KG-------- ENSBTAP00000008634/1-537 ---------- ---------- ---------- LNGREPPEKE KG-------- ENSP00000360797/1-536 ---------- ---------- ---------- LSSGEPPEKE ---------- bmy_14805T0/1-837 AGGGGLGEHH GQRQHRHRGL LAGPSVQPPV VGGGHGAARD LGAAPLGRLF BACU016135/1-491 ---------- ---------- ---------- LSGGESPEKE KG-------- 601 650 ENSTTRP00000007163/1-539 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008634/1-537 ---------- ---------- ---------- ---------- ---------- ENSP00000360797/1-536 ---------- ---------- ---------- ---------- ---------- bmy_14805T0/1-837 VGEHGLVLSL CDAHACCSVK NAAPSINDRG PDTTASDGLA AARTLRPRAG BACU016135/1-491 ---------- ---------- ---------- ---------- ---------- 651 700 ENSTTRP00000007163/1-539 ---------- ----RRR--- ---------- ---------- ---------- ENSBTAP00000008634/1-537 ---------- ----RRR--- ---------- ---------- ---------- ENSP00000360797/1-536 ---------- ----RRR--- ---------- ---------- ---------- bmy_14805T0/1-837 QRATPAARGQ QSAARRRDGS RAGPLPSCAR FRDGGGVASA GRGGLGCAGR BACU016135/1-491 ---------- ----RRR--- ---------- ---------- ---------- 701 750 ENSTTRP00000007163/1-539 ---------- ---------- ---------- ---------- -LKESFE-NY ENSBTAP00000008634/1-537 ---------- ---------- ---------- ---------- -LKESFE-NY ENSP00000360797/1-536 ---------- ---------- ---------- ---------- -LKESFE-NY bmy_14805T0/1-837 PAGGMVRAAL GLLPILLSCA RPRGPGLRWL WGRGARLEAV GRRRAWDCGW BACU016135/1-491 ---------- ---------- ---------- ---------- -LKESFE-NY 751 800 ENSTTRP00000007163/1-539 RR-------- ---------- ----KRALRK MQH------- ---------- ENSBTAP00000008634/1-537 RR-------- ---------- ----KRALRK MQL------- ---------- ENSP00000360797/1-536 RR-------- ---------- ----KRALRK MQK------- ---------- bmy_14805T0/1-837 RRLSSEPGPG PAHYQLVYTC KVCGTRSYKR ISKLAYHQGV VIVTCPGCQN BACU016135/1-491 R--------- ---------- -----RSSKR ISKLAYHQGV VIVTCSGCQN 801 850 ENSTTRP00000007163/1-539 --------GA ---------- -----RQGE- ---------- ---------- ENSBTAP00000008634/1-537 --------GA ---------- -----RQGE- ---------- ---------- ENSP00000360797/1-536 --------GW ---------- -----RQGE- ---------- ---------- bmy_14805T0/1-837 HHIIADNLGW FSDLNGKRNI EEILAARGEK VHRVAGEGAL ELVLEAAGTP BACU016135/1-491 HHIIADNLGW FSDLDGKRNI EEILAARGEK VHRVAGEGAL ELVLEAAGTP 851 900 ENSTTRP00000007163/1-539 ------VDWE NTTGSDNTDT EGS ENSBTAP00000008634/1-537 ------ADGE NTTGSDNTDT EGA ENSP00000360797/1-536 ------EDRE NTTGSDNTDT EGS bmy_14805T0/1-837 KSTTAMEGAE DQDPTHSGKT EAS BACU016135/1-491 KSTTAMEGAE DQDPTHSGKT EAS