KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:51 2014 Check: 00 .. Name: ENSP00000278520/1-544 Len: 569 Check: 4805 Weight: 1.00 Name: ENSBTAP00000008639/1-522 Len: 569 Check: 8285 Weight: 1.00 Name: ENSTTRP00000006996/1-519 Len: 569 Check: 5328 Weight: 1.00 Name: bmy_12465T0/1-539 Len: 569 Check: 6456 Weight: 1.00 Name: BACU014478/1-524 Len: 569 Check: 9380 Weight: 1.00 // 1 50 ENSP00000278520/1-544 ---------- -----MIHVR RHETRRNSKS HVPEQKSRVD WRRTKRSSIS ENSBTAP00000008639/1-522 ---------- -----MVHVR RHETRKNSKT QGHEQKSRVD WRRTKRNSLL ENSTTRP00000006996/1-519 ---------- -----MVHIR RHETRKNSKT QECEQKSRVD WRRTKRSSLS bmy_12465T0/1-539 MDGFIDFLLA RRLVESELLA RHETRKNSKT QECEQKSRVD WRRTKRSSLS BACU014478/1-524 ---------- -----MVHIR RHETRKNSKT QECEQKSRVD WRRTKRSSLS 51 100 ENSP00000278520/1-544 QLLDSDEELD S-EEFDSDEE LDSDESFEND EELDSNKGPD CNKTPGSERE ENSBTAP00000008639/1-522 QLCESGDELE ------SDEG VDSNESVDSD EDPDSNKGPD CIEKPEDERE ENSTTRP00000006996/1-519 QLCDSDDELE SDEELDSDES VDSNESVDSD EEPDSNEGLD SNKKPENERE bmy_12465T0/1-539 QLCDSDDELE SDEELDSDES VDNNESVDSD EEPDSNKGLD SNKKPENERE BACU014478/1-524 QLCDSDDELD SDEELDSDES VDNNESVDSD EEPDSNKGLD SNKKPENEGE 101 150 ENSP00000278520/1-544 LNLSKIQSEG NDSKCLINSG NGSTYEEETN KIKHRNIDLQ DQEKHLSQED ENSBTAP00000008639/1-522 LKLINVEGEG NSSKHLINTD NSSTYEEEQN KTKHGSIDLA ---------- ENSTTRP00000006996/1-519 LKLIKVESEG NNSKHLINTG NSSTYEEEKN KTKHGSIDLP ---------- bmy_12465T0/1-539 LKLIKVESEG NNSKHLINTD NSSAYEEEKN KTKHGSIDLP ---------- BACU014478/1-524 LKLIEVESEG NSSKHLINTG NSSTYEEEKN KTKHGSIDLP ---------- 151 200 ENSP00000278520/1-544 NDLNKQTGQI IEDDQEKHLS QEDNDLNKQT GQIIEDDLEE EDIKRGKRKR ENSBTAP00000008639/1-522 ---------- ---DHEKGPG QEEGDLNKHT GQITEEDLEE EHIKRGKRKR ENSTTRP00000006996/1-519 ---------- ---DHEKHSG QEEDDLNK-T GQITEEDLEE EHIKRGKRKR bmy_12465T0/1-539 ---------- ---HLEKHSG QEEDDLNKHS GQIPEEDLEE EHIKRGKRKR BACU014478/1-524 ---------- ---DHEKHTG QEEDDLNKHS GQIPEEDLEE EHIKRGKRKR 201 250 ENSP00000278520/1-544 LSSVMCDSDE SDDSDILVRK VGVKRPRRVV EDEGSSVEME QKTPEKTLAA ENSBTAP00000008639/1-522 ISSVMCDSDE SDDSDILVRK VGVKRPRRVV EDECSSVEME QKNPEKTSAT ENSTTRP00000006996/1-519 TSSVMYDSDE SDDSDILVRK VGVKHPRRVV EDECSSVEME QKEPEKTLAA bmy_12465T0/1-539 ISSVMYDSDE SDDSDILVRK VGVKHPRRVV EDECSSVEME QKEPEKTLAA BACU014478/1-524 ISSVMYDSDE SDDSDILVRK VGVKHPRRVV EDECSSVEME QKEPGKTLAA 251 300 ENSP00000278520/1-544 QKREKLQKLK ELSKQRSRQR RSSGRDFEDS EKESCPSSDE VDEEE---EE ENSBTAP00000008639/1-522 RRREQLQKLE ELSKQRSRQR HNSSRDFEDS EKKSSPSSDE NDVEEEEEED ENSTTRP00000006996/1-519 RKREQLQKLQ DLSKQRSRQR RSSSRDFEDS EKKSCPSSDE NDDEEEGKEE bmy_12465T0/1-539 RKREQLQKLQ DLSKQRSRQR RSSSRDFEDS EKKSCPSSDE NDDEEEGEEE BACU014478/1-524 RKREQLQKLQ DLSKQRSRQR RSSSRDLEDS EKKSCPSSDE NDDEEEGEEE 301 350 ENSP00000278520/1-544 DNYES----- -DEDGDDYII DDFVVQDEEG DEENKNQQGE KLTTSQLKLV ENSBTAP00000008639/1-522 NDYEFDEDEI TDEDGDHYII DGFVVQDEEG DEENKSQQGE QLTTSQRKSI ENSTTRP00000006996/1-519 DDYEY----- -DEDGDDYVI DDFVVQDEEG DEENKSQRGE KL-----KLV bmy_12465T0/1-539 DDYEY----- -DEDGDDYII DDFVVQDEEG DEENKSQGGE KLTTSQLKLV BACU014478/1-524 DDYEY----- -DEDGDDYII DDFVVQDEEG DEENKSQGGE KLTTSQLKLV 351 400 ENSP00000278520/1-544 KQNSLYSFSD HYTHFERVVK ALLINALDES FLGTLYDGTR QKSYAKDMLT ENSBTAP00000008639/1-522 KQN---SFCD HYTHFERVVK ALLINALDES FLGTLYDGTR QKSYAQDMLT ENSTTRP00000006996/1-519 KQNSLYSFSD HYTHFERVVK ALLINALDKS FLGTLYXXXX XXXXXXXXXX bmy_12465T0/1-539 KQNSLYSFSD HYTHFERVVK ALLINALDKS FLGTLYDGTR QKSYAQDMLT BACU014478/1-524 KQNTLYSFSD HYTHFERVVK ALLINALDKS FLGTLYDGTR QKSYAQDMLT 401 450 ENSP00000278520/1-544 SLHYLDNRFV QPRLESLVSR SRWKEQYKER VENYSNVSIH LKNPENCSCQ ENSBTAP00000008639/1-522 SLYYLDNRFV QPRLENLVSR SRWKEKYKER VENYSSVDIQ LKTSENCLCQ ENSTTRP00000006996/1-519 XXXXXXXXXX XXXXXXXXXX XXXXXXXXER VENYSDVSIH LKNPENCSCQ bmy_12465T0/1-539 SLHYLDNRFV QPRLENLSSR SRWKEQYKER VENYSNVSIH LKNPENCSCQ BACU014478/1-524 SLHYLDNRFV QPRLENLTSR SRWKEQYKER VENYSNVSIH LKNPENCSCQ 451 500 ENSP00000278520/1-544 ACGLHRYCKY SVHLSGELYN TRTMQIDNFM SHDKQVFTVG RICASRTRIY ENSBTAP00000008639/1-522 ACGLYRHCEY SVHLSGKLYD TRTMETDDFM SHDKQVFTVG RICAERTRIY ENSTTRP00000006996/1-519 ACGLNRHCRY SVHLSGKLYN TRTMEIDDFM SHDKQVFTVG RICANRTRIY bmy_12465T0/1-539 ACGLHRHCRY SVHLSGKLYN TRTMEIDDFM SHDKQVFTVG RICANRTRIY BACU014478/1-524 ACGLHRHCRY SVHLSGKLYN TRTMEVDDFM SHDKQVFTVG RICANRTRIY 501 550 ENSP00000278520/1-544 HKLKHFKFKL YQECCTIAMT EEVEDEQVKE TVERIFRRSK ENGWIKEKYG ENSBTAP00000008639/1-522 HKLKHFKFEL YQECCSIAKT EEVEDEEVKE TVERIFSQSE NSGWIKEKYG ENSTTRP00000006996/1-519 HELKHFKFKL YQECCSIAKT EEVEDEQVKE TVERIFNQSK EGGWIKEKYD bmy_12465T0/1-539 HNLKHFKFKL YQECCSIAKT EEVEDEQVKE AVERIFNQSK ESGWIKEKYG BACU014478/1-524 HNLKHFKFKL YEDCCSIAKA EEVEDEQVKE AVERIFNQSK ESGWIKEKYG 551 600 ENSP00000278520/1-544 QLEEYLNFAD YFQEEKFEL ENSBTAP00000008639/1-522 QLQEYLNLAD YFKEEKFEF ENSTTRP00000006996/1-519 QLQEYLSSAD YFQDEKFEL bmy_12465T0/1-539 QLQDYLNFAD YFQDEKFD- BACU014478/1-524 QLQEYLNFAD YFQDEKFD-