KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:54 2014 Check: 00 .. Name: ENSP00000383212/1-1148 Len: 1250 Check: 3445 Weight: 1.00 Name: ENSBTAP00000008658/1-1139 Len: 1250 Check: 5465 Weight: 1.00 Name: ENSTTRP00000015644/1-1119 Len: 1250 Check: 7540 Weight: 1.00 Name: bmy_17850T0/1-993 Len: 1250 Check: 2632 Weight: 1.00 Name: BACU008818/1-1195 Len: 1250 Check: 3227 Weight: 1.00 // 1 50 ENSP00000383212/1-1148 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008658/1-1139 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015644/1-1119 ---------- ---------- ---------- ---------- ---------- bmy_17850T0/1-993 ---------- ---------- ---------- ---------- ---------- BACU008818/1-1195 MMRGENSGML DWMRRFQTSF VDTGQYSALA ITQGSHSLPV WMPPPKQLVC 51 100 ENSP00000383212/1-1148 -------MAS APAEAETRQR LLRTVKKEVK QIMEEAVTRK FVHEDSSHII ENSBTAP00000008658/1-1139 ---------- -------MLL KERNHWREVK QIMEEAVTRK FVHEDSSHII ENSTTRP00000015644/1-1119 -------MAS GLAEAETRQR LLRTVKKEVK QIMEEAVTRK FVHEDSSHII bmy_17850T0/1-993 ---------- ---------- ---------- ---------- ---------- BACU008818/1-1195 TWDEEPLGGA VVTQAETRQR LLRTVKKEVK QIMEEAVTRK FVHEDSSHIV 101 150 ENSP00000383212/1-1148 SFCAAVEACV LHGLRRRAAG FLRSNKIAAL FMKVGKNFPP AEDLSRKVQD ENSBTAP00000008658/1-1139 SFCAAVEACV LHGLRRRAAG FLRSNKIAAL FMKVGKSFPP AEELSRKVQD ENSTTRP00000015644/1-1119 SFCAAVEACV LHGLRRRAAG FLRSNKIAAL FMKVGKSFPP AEELSRKVQD bmy_17850T0/1-993 ---------- ---------- ---------- ---------- ---------- BACU008818/1-1195 SFCAAVEACV LHGLRRRAAG FLRSNKIAAL FMKVGKSFPP AEELSHKVQD 151 200 ENSP00000383212/1-1148 LEQLIESARN QIQGLQENVR KLPKLPNLSP LAIKHLWIRT ALFEKVLDKI ENSBTAP00000008658/1-1139 LEQLIESARN QIQGLQENVR KLPKLPSLSP LAIKHLWIRT ALFEKVLDKI ENSTTRP00000015644/1-1119 LEQLIESARN QIQGLQENVR KLPKLPNLSP LAIKHLWIRT ALFEKVLDKI bmy_17850T0/1-993 ---------- ---------- ---------- --------MM ALFEKVLDKI BACU008818/1-1195 LEQLIESARN QIQGLQENVR KLPKLPNLSP LAIKHLWIRT ALFEKVLDKI 201 250 ENSP00000383212/1-1148 VHYLVENSSK YYEKEALLMD PVDGPILASL LVGPCALEYT KMKTADHFWT ENSBTAP00000008658/1-1139 VHYLVENSSK YYEKEALLMD PVDGPILASL LVGPCALEYT KMKTSDHFWT ENSTTRP00000015644/1-1119 VHYLVENSSK YYEKEALLMD PVDGPILASL LVGPCALEYT KMKTSDHFWT bmy_17850T0/1-993 VHYLVENSSK YYEKEALLMD PVDGPILASL LVGPCALEYT KMKTSDHFWT BACU008818/1-1195 VHYLVENSSK YYEKEALLMD PVDGPILASL LVGPCALEYT KMKTSDHFWT 251 300 ENSP00000383212/1-1148 DPSADELVQR HRIHSSHVRQ DSPTKRPALC ---------- ---------- ENSBTAP00000008658/1-1139 DPSADELVQR HRIHSSHLRQ DSPTKRPALC ---------- ---------- ENSTTRP00000015644/1-1119 DPSADELVQR HRIHSLHLRQ DSPTKRPALC ---------- ---------- bmy_17850T0/1-993 DPSADELVQR HRIHSLHLRQ DSPTKRPALC VSGVDGGALG GSLAEFWTWY BACU008818/1-1195 DPSADELVQR HRIHSLHLRQ DSPTKRPALC VSVVDGGALG GSLAEFWTWY 301 350 ENSP00000383212/1-1148 ---------- ---------- ----IQKRHS SGSMDDRPSL SARDYVESLH ENSBTAP00000008658/1-1139 ---------- ---------- ----IQKRHS SGSMDDRPSL SARDYVESLH ENSTTRP00000015644/1-1119 ---------- ---------- ----IQKRHS SSSMDDRPSL SARDYVESLH bmy_17850T0/1-993 GGGEWTGALV VTPDLICHLP AHCQIQKRHS SSSMDDRPSL SARDYVESLH BACU008818/1-1195 GGGEWTGALV VTPDLICHLP AHCQIQKRHS SSSMDDRPSL SARDYVESLH 351 400 ENSP00000383212/1-1148 QNSRATLLYG KNNVLVQPRD DMEAVPGYLS LHQTADVMTL KWTPNQLMNG ENSBTAP00000008658/1-1139 QNSRATLLYG KNNVLVQPRD DMEAVPGYLS LHQTADVMTL KWTPNQLMNG ENSTTRP00000015644/1-1119 QNSRATLLYG KNNVLVQPRD DMEAVPGYLS LHQTADVMTL KWTPNQLMNG bmy_17850T0/1-993 QNSRATLLYG KNNVLVQPRD DMEAVPGYLS LHQTADVMTL KWTPNQLMNG BACU008818/1-1195 QNSRATLLYG KNNVLVQPRD DMEAVPGYLS LHQTADVMTL KWTPNQLMNG 401 450 ENSP00000383212/1-1148 SVGDLDYEKS VYWDYAMTIR LEEIVYLHCH QQVDSGGTVV LVSQDGIQRP ENSBTAP00000008658/1-1139 SVGDLDYEKS VYWDYAMTIR LEEIVYLHCH QQVDSGGTVV LVSQDGIQRP ENSTTRP00000015644/1-1119 SVGDLDYEKS VYWDYAMTIR LEEIVYLHCH QQVDSGGTVV LVSQDGIQRP bmy_17850T0/1-993 SVGDLDYEKS S--------- -------PVD DLVDSGGTVV LVSQDGIQRP BACU008818/1-1195 SVGDLDYEKS VYWDYAMTIR LEEIVYLHCH QQVDSGGTVV LVSQDGIQRP 451 500 ENSP00000383212/1-1148 PFRFPKGGHL LQFLSCLENG LLPHGQLDPP LWSQRGKGKV FPKLRKRSPQ ENSBTAP00000008658/1-1139 PFRFPKGGHL LQLLSCLENG LLPHGQLDPP LWSQRGKGKV FPKLRKRSPQ ENSTTRP00000015644/1-1119 PFRFPKGGHL LQFLSCLENG LLPHGQLDPP LWSQRGKGKV FPKLRKRSPQ bmy_17850T0/1-993 PFRFPKGGHL LQFLSCLENG LLPHGQLDPP LWSQRGKGKV FPKLRKRSPQ BACU008818/1-1195 PFRFPKGGHL LQFLSCLENG LLPHGQLDPP LWSQRGKGKV FPKLRKRSPQ 501 550 ENSP00000383212/1-1148 GSAESTSSDK DDDEATDYVF RIIYPGMQSE FVAPDFLGST SSVSVGPAWM ENSBTAP00000008658/1-1139 GSSESTSSDK EDDEATDYVF RIIYPGMQSE LVASSPLGGT PPISAGPAWM ENSTTRP00000015644/1-1119 GSSESTSSDK EDEEATDYVF RIIYPGMQSE FVASSAVGGT SPVSVGPAWM bmy_17850T0/1-993 GSSESTSSDK EDEEATDYVF RIIYPGMQSE FVASSAMGGT SPVSVGPAWM BACU008818/1-1195 GSSESTSSDK EDEEATDYVF RIIYPGMQSE FV-------- ---------- 551 600 ENSP00000383212/1-1148 MVPAGRSMLV VARGSQWEPA RWDTTLPTPS PKEQPPMPQD LMDVSVSNLP ENSBTAP00000008658/1-1139 VVPAGRSALV VARGSRWAQA RWDTTLPTSR LKPQSLIPQD LMDVSVSNLP ENSTTRP00000015644/1-1119 VVPAGRSALV VARGSRWAQT KWDTTLPTSS QKPQPPIPQD LMDVSVSNLP bmy_17850T0/1-993 VVPAGPSTLV VARGSRWAQT KWDTTLPTSS QKPQPPIPQD LMDVSVSNLP BACU008818/1-1195 ---------- ---------- ---------- -------PQD LMDVSVSNLP 601 650 ENSP00000383212/1-1148 SLWQPSPRKS SCSSCSQSGS ADGSSTNGCN HERAPLKLLC DNMKYQILSR ENSBTAP00000008658/1-1139 SLWQPSPRQS SCSSCSQSGS ADGGSTNGCN HERAPLKLLC DNMKYQILSR ENSTTRP00000015644/1-1119 SLWQPSPRK- --SSCSQSGS ADGGSTNGCN HERAPLKLLC DNMKYQILSR bmy_17850T0/1-993 SLWQPSPRKS SCSSCSQSGS ADGGSTNGCN HERAPLKLLC DNMKYQILSR BACU008818/1-1195 SLWQPSPRKS SCSSCSQSGS ADGGSTNGCN HERAPLKLLC DNMKYQILSR 651 700 ENSP00000383212/1-1148 AFYGWLAYCR HLSTVRTHLS ALVNHMIVSP DLPCDAGQGL TARIWEQYLH ENSBTAP00000008658/1-1139 AFYGWLAYCR HLSTVRTHLS ALVNHMIVSP DLPCDAGHGL TAGIWEQYLQ ENSTTRP00000015644/1-1119 AFYGWLAYCR HLSTVRTHLS ALVNHMIVSP DLPCDAGHGL TAEIWEQYLQ bmy_17850T0/1-993 AFYGWLAYCR HLSTVRTHLS ALVNHMIVSP DLPCDAGHGL TAEIWEQYLQ BACU008818/1-1195 AFYGWLAYCR HLSTVRTHLS ALVNHMIVSP DLPCDAGHGL TAEIWEQYLQ 701 750 ENSP00000383212/1-1148 DSTSYEEQEL LRLIYYGGIQ PEIRKAVWPF LLGHYQFGMT ETERKEVDEQ ENSBTAP00000008658/1-1139 DSTSYEEQEL LRLIYYGGIQ PEIRKAVWPF LLGHYQFGMT ETERKEVDEQ ENSTTRP00000015644/1-1119 DSTSYQEREL LRLIYYGGIQ PEIRKAVWPF LLGHYQFGMT ETERKEVDEQ bmy_17850T0/1-993 DSTSYEEQEL LRLIYYGGIQ PEIRKAVWPF LLGHYQFGMT ETERKEVDEQ BACU008818/1-1195 DSTSYEEQEL LRLIYYGGIQ PEIRKAVWPF LLGHYQFGMT ETERKEVDEQ 751 800 ENSP00000383212/1-1148 IHACYAQTMA EWLGCEAIVR QRERESHAAA LAKCSSGASL DSHLHRMLHR ENSBTAP00000008658/1-1139 IHACYTQTMS EWLGCEAIVR QRERESHAAA LAKCSSGASL DSHLHQMMHR ENSTTRP00000015644/1-1119 MHACYAQTMS XX-------- ---------- --------SL DSH-HRMMHR bmy_17850T0/1-993 MHACYTQTMS EWLGCEAIVR QRERESHAAA LAKCSSGASL DSHLHRMMHR BACU008818/1-1195 MHACYAQTMS EWLGCEAIVR QRERESHAAA LAKCSSGASL DSHLHRMMHR 801 850 ENSP00000383212/1-1148 DSTISNESSQ SCSSGRQNIR LHSDSSSSTQ VFESVDEVEQ VEAEGRLEEK ENSBTAP00000008658/1-1139 DSTISNESSQ SCSSGRQNIR LQSDSSSSTQ VFESVDEAEQ VEAEGRLEEK ENSTTRP00000015644/1-1119 DSTISNESSQ SCSSGRQNIR LQSDSSSSTQ VFESVDEVEQ VEAECRLEEK bmy_17850T0/1-993 DSTISNESSQ SCSSGRQNIR LQSDSSSSTQ ---------- ---------- BACU008818/1-1195 DSTISNESSQ SCSSGRQNIR LQSDSSSSTQ VFESVDEVEQ VEAECRLEEK 851 900 ENSP00000383212/1-1148 QPKIPNGNLV NGTCSPDSGH PSSHNFSSGL SEHSEPSLST EDSVLDAQRN ENSBTAP00000008658/1-1139 PTKIPNGNLV NGTCSPDSGH PSSHNFSSGL SEHSEPSLST EDSVMDAQRT ENSTTRP00000015644/1-1119 QPKIPNGNLV NGTCSPDSGH PSSHNFSSGL SEHSEPSLST EDSVMDAQRP bmy_17850T0/1-993 QPKIPNGNLV NGTCSPDSGH PSSHNFSSGL SEHSEPSLST EDSVMDAQRP BACU008818/1-1195 QPKIPNGNLV NGTCSPDSGH PSSHNFSSGL SEHSEPSLST EDSVVDAQRP 901 950 ENSP00000383212/1-1148 TPTVLRPRDG SVDDRQSSEA TTSQDEAPRE ELAVQDSLES DLLANESMDE ENSBTAP00000008658/1-1139 APLVLRPRDS SMDDGQSSEA TTSRDEATRE ELAVQDSLES DLLANESMDE ENSTTRP00000015644/1-1119 APLVIRPRDS GVDDGQSSEA TTSRDEVPRE ELAVQDSLES DLLANGSMDE bmy_17850T0/1-993 APLVIRPRDS GVDDGQSSEA TASRDEVPRE ELAVQDSLES DLLANGSMDE BACU008818/1-1195 APLVIRPRDS GVDDGQSSEA TASRDEVPRE ELAVQDSLES DLLANGSMDE 951 1000 ENSP00000383212/1-1148 FMSITGSLDM ALPEKDDVVM EGWRSSETEK HGQADSEDNL SEEPEMESLF ENSBTAP00000008658/1-1139 FMSITSSLDV ALPEKEGPAM EGWRGSEAEK QSQVDSEDNL SEEPEMESLF ENSTTRP00000015644/1-1119 FVSITGSMDV ALPEREGPAM EGWRGIEVGK QSQVGSEDDL SEEPEMESLF bmy_17850T0/1-993 FVSVTGSMDV ALPERGGPAM EGWRGIEVGT QSQVDSEDNL SEEPEMESLF BACU008818/1-1195 FVSITGSMDV ALPKRGGPAV EGWRGIEVGK QSQVDSEDNL SEEPEMESLF 1001 1050 ENSP00000383212/1-1148 PALASLAVTT SAN-EVSPVS SSGVTYSPEL LDLYTVNLHR IEKDVQRCDR ENSBTAP00000008658/1-1139 PALASLAVTT SANSEASPVS SSGVTYSPEL LDLYTVNLHR IEKDVQRCDR ENSTTRP00000015644/1-1119 PVLASLAVTT SANNEASPVS SSGVTYSPEL LDLYTVNLHR IEKDVQRCDR bmy_17850T0/1-993 PVLASLAVTT SANSEASPVS SSGVTYSPEL LDLYTVNLHR IEKDVQRCDR BACU008818/1-1195 PVLASLAVTT SANSEASPVS SSGVTYSPEL LDLYTVNLHR IEKDVQRCDR 1051 1100 ENSP00000383212/1-1148 NYWYFTPANL EKLRNIMCSY IWQHIEIGYV QGMCDLLAPL LVILDDEALA ENSBTAP00000008658/1-1139 NYWYFTPANL EKLRNIMCSY IWQHIEIGYV QGMCDLLAPL LVILDDEALA ENSTTRP00000015644/1-1119 NYWYFTPANL EKLRNIMCSY IWQHIDIGYV QGMCDLLAPL LVILDDEALA bmy_17850T0/1-993 NYWYFTPANL EKLRNIMC-- ---------- ---------- ---------- BACU008818/1-1195 NYWYFTPANL EKLRNIMCSY IWQHIDIGYV QGMCDLLAPL LVILDDEALA 1101 1150 ENSP00000383212/1-1148 FSCFTELMKR MNQNFPHGGA MDTHFANMRS LIQILDSELF ELMHQNGDYT ENSBTAP00000008658/1-1139 FSCFTELMKR MNQNFPHGGA MDTHFANMRS LIQILDSELF ELMHQNGDYT ENSTTRP00000015644/1-1119 FSCFTELMKR MNQNFPHGGA MDTHFANMRS LIQILDSELF ELMHQNGDYT bmy_17850T0/1-993 -SCFTELMKR MNQNFPHGGA MDTHFANMRS LIQILDSELF ELMHQNGDYT BACU008818/1-1195 FSCFTELMKR MNQNFPHGGA MDTHFANMRS LIQILDSELF ELMHQNGDYT 1151 1200 ENSP00000383212/1-1148 HFYFCYRWFL LDFKRELVYD DVFLVWETIW AAKHVSSAHY VLFIALALVE ENSBTAP00000008658/1-1139 HFYFCYRWFL LDFKRELIYD DVFSVWETIW AAKHVSSAHY VLFIALALVE ENSTTRP00000015644/1-1119 HFYFCYRWFL LDFKRELIYD DVFSVWETIW AAKHVSSAHY VLFIALALVE bmy_17850T0/1-993 HFYFCYRWFL LDFKRELIYD DVFSVWETIW AAKHVSSAHY VLFIALALVE BACU008818/1-1195 HFYFCYRWFL LDFKRELIYD DVFSVWETIW AAKHVSSAHY VLFIALALVE 1201 1250 ENSP00000383212/1-1148 VYRDIILENN MDFTDIIKFF NEMAERHNTK QVLKLARDLV YKVQTLIENK ENSBTAP00000008658/1-1139 VYRDIILENN MDFTDIIKFF NEMAERHNTK QVLKLARDLV YKVQTLIENK ENSTTRP00000015644/1-1119 VYRDIILENN MDFTDIIKFF NEMAERHNTK QVLKLARDLV YKVQTLIENK bmy_17850T0/1-993 VYRDIILENN MDFTDIIKFF NEMAERHNTK QVLKLARDLV YKVQTLIENK BACU008818/1-1195 VYRDIILENN MDFTDIIKFF NEMAERHNTK QVLKLARDLV YKVQTLIENK