KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:55 2014 Check: 00 .. Name: ENSP00000304586/1-656 Len: 785 Check: 310 Weight: 1.00 Name: ENSBTAP00000008660/1-655 Len: 785 Check: 6754 Weight: 1.00 Name: ENSTTRP00000005138/1-657 Len: 785 Check: 8065 Weight: 1.00 Name: bmy_14666T0/1-781 Len: 785 Check: 9377 Weight: 1.00 Name: BACU009150/1-657 Len: 785 Check: 6385 Weight: 1.00 // 1 50 ENSP00000304586/1-656 MSELSDEASE PELLNRSLSM WHGLGTQVSG EELDVPLDLH TAASIGQYEV ENSBTAP00000008660/1-655 MSELSDEASE PELLNRSLSM WHGLGTQVGR EELAVPLDLH TAASIGQYEV ENSTTRP00000005138/1-657 MSELSDEASE PELLNRSLSM WHGLGAQVSR EELAVPLDLH TAASIGQYEV bmy_14666T0/1-781 MSELSDEASE PELLNRSLSM WHGLGAQVSR EELAVPLDLH TAASIGQYEV BACU009150/1-657 MSELSDEASE PELLSRSLSM WHGLGAQVSR EELAVPLDLH TAASIGQYEV 51 100 ENSP00000304586/1-656 VKECVQRREL DLNKKNGGGW TPLMYASYIG HDTIVHLLLE AGVSVNVPTP ENSBTAP00000008660/1-655 VKECVQRREL DLNKKNGGGW TPLMYASYIG HDTIVHLLLE AGVSVNVPTP ENSTTRP00000005138/1-657 VKECVQRREL DLNKKNGGGW TPLMYASYIG HDTIVHLLLE AGVSVNVPTP bmy_14666T0/1-781 VKECVQRREL DLNKKNGGGW TPLMYASYIG HDTIVHLLLE AGVSVNVPTP BACU009150/1-657 VKECVQRREL DLNKKNGGGW TPLMYASYIG HDTIVHLLLE AGVSVNVPTP 101 150 ENSP00000304586/1-656 EGQTPLMLAS SCGNESIAYF LLQQGAELEM KDIQGWTALF HCTSAGHQHM ENSBTAP00000008660/1-655 EGQTPLMLAS SCGNESIAYF LLQQGAELEM KDIQGWTALF HCTSAGHQQM ENSTTRP00000005138/1-657 EGQTPLMLAS SCGNESIAYF LLQQGAELEM KDIQGWTALF HCTSAGHQQM bmy_14666T0/1-781 EGQTPLMLAS SCGNESIAYF LLQQGAELEM KDIQGWTALF HCTSAGHQQM BACU009150/1-657 EGQTPLMLAS SCGNESIAYF LLQQGAELEM KDIQGWTALF HCTSAGHQQM 151 200 ENSP00000304586/1-656 VRFLLDSGAN ANVREPICGF TPLMEAAAAG HEIIVQYFLN HGVKVDARDH ENSBTAP00000008660/1-655 VKFLLDSGAN ANVREPVYGF TPLMEAAAAG HEIIVQYFLN HGVKVDTRDH ENSTTRP00000005138/1-657 VKFLLDSGAN ANVREPVYGF TPLMEAAAAG HEIIVQYFLN HGVKVDTRDH bmy_14666T0/1-781 VKFLLDSGAN ANVREPVYGF TPLMEAAAAG HEIIVQYFLN HGVKVDTRDH BACU009150/1-657 VKFLLDSGAN ANVRDPVYGF TPLMEAAAAG HEIIVQYFLN HGVKVDTRDH 201 250 ENSP00000304586/1-656 SGATARMLAK QYGHMKIVAL MDTYSPSLPK SLYRSPEKYE DLSSSDESCP ENSBTAP00000008660/1-655 SGATARMLAK QYGHMKIVGL IDAHSPSLPK SLYRSPEKYE DLSSSDECGP ENSTTRP00000005138/1-657 SGATARMLAK QYGHMKIVGL IDAHSPSLPK SLYRSPEKYE DLSSSDESCP bmy_14666T0/1-781 SGATARMLAK QYGHMKIVGL IDAHSPSLPK SLYRSPEKYE DLSSSDESCP BACU009150/1-657 SGATARMLAK QYGHMKIVGL IDAHSPSLPK SLYRSPEKYE DLSSSDESCP 251 300 ENSP00000304586/1-656 APQRQRPCRK KGVSIHEGPR ALARITGIGL GGRAPRPRYE QAPPRGYVTF ENSBTAP00000008660/1-655 VPQRQRPCRK KGLSIHEGPR ALARITAIGL GGRVQQPCYE QVPPRGYVSF ENSTTRP00000005138/1-657 VPQRQRPCRK KGLSIHEGPR ALARLTAIGL GGRIQQPCYE QVPPRGYVTF bmy_14666T0/1-781 VPQRQRPCRK KGLSIHEGPR ALARLTAIGL GGRMQQPCYE QVPPRGYVTF BACU009150/1-657 IPQRQRPCRK KGLSIHEGPR ALARLTAIGL GGRMQQPCYE QVPPRGYVTF 301 350 ENSP00000304586/1-656 NSSGENPLEE EGLCCRDVTS PINERDVESS SSSSSREEHA FCANLGPVQS ENSBTAP00000008660/1-655 NSSDEHPLEG GGLCYRDVTS PINERDVE-S SSSSSREEQA FSAN--PVAR ENSTTRP00000005138/1-657 NSSDENPLEE GGLCYRDVTS PINERDVE-S SSSSSREEHA FCAHLGAARS bmy_14666T0/1-781 NSSDENPLEE GGLCYRDVTS PINERDVE-S SSGSSREEHA FCARLGAARS BACU009150/1-657 NSSDENPLEE GGLCYRDVTS PINERDVE-S SSGSSREEHA FCARLGAARS 351 400 ENSP00000304586/1-656 SSSSEGLARA QGLSSEASVE SNEDSDHACK SSARKQAKSY MKTKN----P ENSBTAP00000008660/1-655 SSSSEGLARA PGLSSEASLE SNEDSDHVRR SSVRKQTKSY VKTKNRYSSN ENSTTRP00000005138/1-657 SSSSEGLARA PELSSEASLE SNEDSDHARK SSVRKQTKSY VKTKNRYSSS bmy_14666T0/1-781 SSSSEGLARA PELSSEASLE SNEDSDHARK SSVRKQTKSY VKTKNRYSSS BACU009150/1-657 SSSSEGLARA PELSSEASLE SNEDSDHARK SSVRKQTKSY VKTKNRYSSS 401 450 ENSP00000304586/1-656 DSQWPPRAAT DREGFLAESS PQTQRAPYSG PQDLAALLEQ IGCLKYLQVF ENSBTAP00000008660/1-655 DSQWAPSAVT SCA---LGAS PQTDRPPYSG PQDLATLLEQ IGCLKYLQVF ENSTTRP00000005138/1-657 DSQWPPGTGT SCA---PRLI PQTDRSPYSG PQDLATLLEQ IGCLKYLQVF bmy_14666T0/1-781 DSQWPPGTGT SCA---PGLI PQTDRSPYSG PQDLATLLEQ IGCLKYLQVF BACU009150/1-657 DSQWPPGTGT SCA---PGLI PQTDRSPYSG PQDLATLLEQ IGCLKYLQVF 451 500 ENSP00000304586/1-656 EEQDVDLRIF LTLTESDLKE IGITLFGPKR KMTSAIARWH SSARPPGDAL ENSBTAP00000008660/1-655 EEQDVDLRIF LTLTESDLKE IGITLFGPKR KMTSAIARWH SSARPPSDAL ENSTTRP00000005138/1-657 EEQDVDLRIF LTLTESDLKE IGITLFGPKR KMTSAIARWH SSARPPSDAL bmy_14666T0/1-781 EEQDVDLRIF LTLTESDLKE IGITLFGPKR KMTSAIARWH SSARPPSDAL BACU009150/1-657 EEQDVDLRIF LTLTESDLKE IGITLFGPKR KMTSAIARWH SSARPPSDAL 501 550 ENSP00000304586/1-656 ELAYADRLEA EMQELAIQLH K--------- ---------- ---------- ENSBTAP00000008660/1-655 ELAYADRLEA EMQELAIQLH K--------- ---------- ---------- ENSTTRP00000005138/1-657 ELAYADRLEA EMQELAIQLH K--------- ---------- ---------- bmy_14666T0/1-781 ELAYADRLEA EMQELAIQLH KVSRELGQGM CREGHSVETD AQNQRRAAAR BACU009150/1-657 ELAYADRLEA EMQELAIQLH K--------- ---------- ---------- 551 600 ENSP00000304586/1-656 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008660/1-655 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005138/1-657 ---------- ---------- ---------- ---------- ---------- bmy_14666T0/1-781 AGDRTARPGS IMARMQWGAQ VGTGGRKGVS SAHRRACRKG PRPGGLQGGD BACU009150/1-657 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000304586/1-656 ---------- ---------- ---------- ---------- -----RCEEV ENSBTAP00000008660/1-655 ---------- ---------- ---------- ---------- -----RCEEV ENSTTRP00000005138/1-657 ---------- ---------- ---------- ---------- -----RCEEV bmy_14666T0/1-781 RSPPGQERRR QSDGRDGTWG GGTPPEWSFP TPRTGLLHLL PLPLQRCEEV BACU009150/1-657 ---------- ---------- ---------- ---------- -----RCEEV 651 700 ENSP00000304586/1-656 EATRGQVCQE QELRAVVESC LLEQDRARED LQARLRETWA LARDAALVLD ENSBTAP00000008660/1-655 EAMRGLVSQE QELRAVVESC LLEQDSARKD VRAQLQEARV LAQDAALVLD ENSTTRP00000005138/1-657 EAMRGLVSQE QELRAVVESC LLEQDGARKD VHAQLQETWA LARDAALVLD bmy_14666T0/1-781 EAMRGLVSQE QELRAVVESC LLEQDGARKD VHARLQETWA LARDAALVLD BACU009150/1-657 EAMRGLVSQE QELRAVVESC LLEQDGARKD VHAQLQEAWA LARDAALVLD 701 750 ENSP00000304586/1-656 QLRACQAELS SRVRQDQPPG AATLGLAVPP ADSKGWQASL QAMSLPELSG ENSBTAP00000008660/1-655 QLRACQAELS ARVRRDEFLR EAPLCPGLPA ADPKGWQASL QALSLPELSG ENSTTRP00000005138/1-657 QLQACQAELS ARVQQDESPL EAMLGPGLPT ADSKGWQAAL QALSLPQLSG bmy_14666T0/1-781 QLRACQAELS ARVQQDESPL EATLGPGLPT ADSKGWQAAL QALSLPQLSG BACU009150/1-657 QLRACQAELS TRVQQDESPL EATLGPGLPT ADSKGWQAAL HALSLPQLSG 751 800 ENSP00000304586/1-656 ALEDRVREMG QALCLVTQSL EKLQVLNGKK -WRET ENSBTAP00000008660/1-655 ALEERVQEMG RVLCSVTQSL EKLQALSGKE SWREP ENSTTRP00000005138/1-657 ALEDRVREMG RVLCLVTQSL EKLQVLNGKE NWREP bmy_14666T0/1-781 ALEDQVREMG RVLCLVTQSL EKLQVLNGKE NWREP BACU009150/1-657 ALEDQVREMG RVLCLVTQSL EKLQVLNGKE NWREP