KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:35:55 2014 Check: 00 .. Name: ENSP00000299320/1-520 Len: 544 Check: 8431 Weight: 1.00 Name: ENSBTAP00000008661/1-492 Len: 544 Check: 2891 Weight: 1.00 Name: bmy_14665T0/1-510 Len: 544 Check: 6755 Weight: 1.00 Name: ENSTTRP00000005156/1-494 Len: 544 Check: 5134 Weight: 1.00 // 1 50 ENSP00000299320/1-520 MASNDKGMAP SLGSPWASQM GPWDAILKAV KDQLPSLDSD SPLSDYGEEE ENSBTAP00000008661/1-492 MASPDEDGRP SLPNP----- --WDAILEAV KHQLPSLDSD SSASDCEDEE bmy_14665T0/1-510 MASHDKDVGP LLPNP----- --WDAILEAV KEQLPSLDSD SSSSNCEEEE ENSTTRP00000005156/1-494 MASHDKDVGP LL-QP----- --WDAILEAV KEQLPSLDSD SSSSNCEEEE 51 100 ENSP00000299320/1-520 LFIFQRNQTS LIPDLSEELA EDPADGDKSR AWVAAAEESL PEPVLVPAEL ENSBTAP00000008661/1-492 LFIFQRNQTV LIPDLSEELA DDPAG----- AWVTSSGSP- PELAAVPVES bmy_14665T0/1-510 LIIFQRNQTA LIPDLSEELA EDPDG----- AWVTSSGSP- PEPAVVPVES ENSTTRP00000005156/1-494 LFIFQRNQTA LIPDLSEELA EDPDG----- AWVTSSGSP- PEPAVVPVES 101 150 ENSP00000299320/1-520 ATEPGCRQNT --RTKDASSQ EGRDPGRPFE SSGEVSALLG MAEEPPRWLE ENSBTAP00000008661/1-492 AMEPWGEWNA WPRPQESAPL EGRAPSK--- ----SSSLLR MSAETPPRQD bmy_14665T0/1-510 AGEPWGEWNA GPQPQKSASL EGRAPGRPLQ SCNESSSLLR MPAETPTWQD ENSTTRP00000005156/1-494 AGEPRGEWNA GPQAQESVSL EGRAPGRPLQ SGDESSSLLR IPVETPTWQD 151 200 ENSP00000299320/1-520 GDLGSLSFNT KGSQGPPWDP QAEATLSCHE GDPKAEPLST ASQ-----ES ENSBTAP00000008661/1-492 DDAGG-TLNT SASQSPRQGP QGEATRSPQE AGLQTEPLGA ASQAQEGSDA bmy_14665T0/1-510 DNGGT-AFNT STSQSPCQGP QGEATLSPQE AGLQTEPPGA ASWAQEGSDS ENSTTRP00000005156/1-494 DDGDT-AFNT STSQSPCQGP QGEATLSSQE AGLQTEPPGA ASWAQEGSDS 201 250 ENSP00000299320/1-520 VNRRALRQER RKMIETDILQ KVTRDACGPT SSDKGGVKEA PCHAAESAPR ENSBTAP00000008661/1-492 ASRKALRRER RKMIEKDILH KVTWDGRNPA CPDASRGKEK ACDAVEVPSE bmy_14665T0/1-510 ANRRALRRER RKMIKKDILH KVTWDAQDPA CQDLSGVKEM PCDAAETLPE ENSTTRP00000005156/1-494 ANRRALRRER RKMIEKDILH KVTWDAQDPA CQDLSGVKEM PCDAAEAA-R 251 300 ENSP00000299320/1-520 SKMPLVEPPE GPPVLSLQQL EAWDLDDILQ SLAGQEDNQG NRAPGTVWWA ENSBTAP00000008661/1-492 G------PPG CLPVLSLQEL EEWDLDQVLL SLTGREEDRG DGAPGAAWWA bmy_14665T0/1-510 G------PQG GLPLLSLHQL EEWDLDQVLQ SLTGREEDPG DGASGAAWWA ENSTTRP00000005156/1-494 G------PQR GPPLLSLQQL EEWDLDQVLQ SLTGREE-LG DGASGAAWWA 301 350 ENSP00000299320/1-520 ADHRQVQDRM VPSAHNRLME QLALLCTTQS KASACARKVP ADTPQDTKEA ENSBTAP00000008661/1-492 AGRLQGQDHT EPSTQDRLME RLSLLCARQS RTAASAWRVP ADTPREARPW bmy_14665T0/1-510 ADRLQGRDHA KPSTQDRLME QLTLLCATQS RAFSSAWRVP SDTPQDIKPQ ENSTTRP00000005156/1-494 ADHLQGQD-M KPSTQDRLME QLTLLCAMQS RAFSSAWRVP SDMPQDIKPQ 351 400 ENSP00000299320/1-520 DSGSRCASRK QGSQAGPGPQ LAQGMRLN-- AESPTIFIDL RQMELPDHLS ENSBTAP00000008661/1-492 ESGSRCASRE LGFQA----- LAQDMQLKNP AEPPTIFTDL RPTKTSDQEP bmy_14665T0/1-510 EAGSRCASKE LGFQA----- LAMDTRLRSP AEPPTVFIDL RPTKPSDQGP ENSTTRP00000005156/1-494 EAGSRCASRE LGFQA----- LAMDTQLRSP AGPPTVFIDL RPTKPSDHGP 401 450 ENSP00000299320/1-520 PE-------- --SSSHSSSD SEEEEEEEMA ALGDAEGASP SSLGLRTCTG ENSBTAP00000008661/1-492 LE-------- --SSSSYSSS SDSEEAEETA AQRDLQGPAR LRKGLQDCTG bmy_14665T0/1-510 SESSSSSSSS HSSCSSSSSD SEEEGEEETA AQRDQQGPAR ----LWDCTG ENSTTRP00000005156/1-494 SE-------- --SCSSSSSD SE-EGEEETA AQRTA-GPAR ----LRDCTG 451 500 ENSP00000299320/1-520 KSQLLQQLRA FQKGTAQPEL PASKGPAGGR AQAPEDTAGS RTGRKQHMKL ENSBTAP00000008661/1-492 KSRLLQQLRA SREASAWPQL PAGKSPVSQK AQAPGDPAGS SPGVKQHVTL bmy_14665T0/1-510 KSQLLQQLRA FRKALAQPKL PAGEGPGSQK AQAPGDTAGS SPGGKQHVTL ENSTTRP00000005156/1-494 KSRLLQQLRA FRKASAQPKL PAGEGPRSQK AQAPGDTAGS SPGGKQHITL 501 550 ENSP00000299320/1-520 CAKGQSAQAR LPRGRPRALG DVPEPGAARE ALMPPLEQL- ---- ENSBTAP00000008661/1-492 WAER-GTQAR PAGGRPSD-- ---SPG---- GLVPPWGQLQ MPRV bmy_14665T0/1-510 WAERQSAQAR PPGGSPRALG DSLGPGTARE ALVPPPGQL- ---- ENSTTRP00000005156/1-494 WDERQSAQAR PPGGSPRALG DPLGPGTARE ALVPPLGQL- ----