KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:57 2014 Check: 00 .. Name: ENSP00000381958/1-762 Len: 955 Check: 2194 Weight: 1.00 Name: ENSBTAP00000008672/1-848 Len: 955 Check: 8425 Weight: 1.00 Name: ENSTTRP00000007672/1-841 Len: 955 Check: 966 Weight: 1.00 Name: bmy_15634T0/1-577 Len: 955 Check: 9625 Weight: 1.00 Name: BACU010518/1-842 Len: 955 Check: 8065 Weight: 1.00 // 1 50 ENSP00000381958/1-762 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008672/1-848 QAKLLRYICK QWHCKLSVAP GERTSELDSY PRFSDWLYTF NVRPDVVQEI ENSTTRP00000007672/1-841 -AKLVRYICK QRQCKLSVAP SERTPELNSY PRFSDWLYTF NVRPEVVQEI bmy_15634T0/1-577 ---------- ---------- ---------- ---------- ---------- BACU010518/1-842 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000381958/1-762 ---------- -MNEAKVKET LRRCGASGDE CGRLQYALTC LRKVTGLGGE ENSBTAP00000008672/1-848 LRELTLDALL DMNEAKVKET LRRCGASAEE CGRLQYALTC LRKVTGLGGE ENSTTRP00000007672/1-841 LCELTLDALL DMNEAKVKET LRRCGASAEE CGRLQYALTC LRKVTGLGGD bmy_15634T0/1-577 ---------- ---------- ---------- ---------- ---------- BACU010518/1-842 ---------- -MNEAKVKET LRRCGASAEE CGRLQYALTC LRKVTGLGGE 101 150 ENSP00000381958/1-762 HKEDSSWSSL DARRESGSGP STDTLSAASL PWPPGSSQLG RAGNSAQGPR ENSBTAP00000008672/1-848 HKEDSGWSSS DARRESGSGP PADTLSPASL PWPPGSSQLG RLGSSAQGPR ENSTTRP00000007672/1-841 HKEDSGWSPS DARRESGSGP PADSLSPASL PWPPGSSQLG RVGSGAQGPR bmy_15634T0/1-577 ---------- ---------- ---------- ---------- ---------- BACU010518/1-842 HKEDSGWSSS DGRRESGSGP PADTLSSASL PWPPGSSLLG RVGIGAQGPR 151 200 ENSP00000381958/1-762 SISVSALPAS DSPTPSFSEG LSDTCIPLHA SGRLTPRALH SFITPPTTPQ ENSBTAP00000008672/1-848 SVSVSALPAS DSPNPGPGEG LSDTFISLHA SGRLTPRALP SFITPPTTPQ ENSTTRP00000007672/1-841 SVSVSALPTS DSPNPGPGEG LADACISLHT SGRLTPRALP SFITPPTTPQ bmy_15634T0/1-577 ---------- ---------- ---------- ---------- ---------- BACU010518/1-842 SVSVSALPTS DSPNPGPGEG LADPCISLHT SGRLTPRALP SFVTPPTTPQ 201 250 ENSP00000381958/1-762 LRRHTKLKPP RTPPPPSRKV FQLLPSFPTL TRSKSHESQL GNRIDDVSSM ENSBTAP00000008672/1-848 LRRHTKLKPP RTPPPPSRKV FQLLPSFPTL TRSKSHESQL GNRIDEVSPM ENSTTRP00000007672/1-841 LRRHTKLKPP RTPPPPSRKV FQLLPSFPTL TRSKSHESQL GNRIDEVSPM bmy_15634T0/1-577 ---------- ---------- ---------- ---------- ---------- BACU010518/1-842 LQRHTKLKPP RTPPPPSRKV FQLLPSFPTL TRSKSHESQL GNRIDEVSPM 251 300 ENSP00000381958/1-762 RFDLSHGSPQ MVRRDIGLSV THRFSTKSWL SQVCHVCQKS MIFGVKCKHC ENSBTAP00000008672/1-848 RFDLPHGSPQ MVRRDIGLSV THRFSTKSWL SQVCHVCQKS MMFGVKCKHC ENSTTRP00000007672/1-841 RFDLLHGSPQ MVRRDIGLSV THRFSTKSWL SQVCHVCQKS MMFGVKCKHC bmy_15634T0/1-577 ---------- MVRRDIGLSV THRFSTKSWL SQVCHVCQKS MMFGVKCKHC BACU010518/1-842 RFDLPHGSPQ MVRRDIGLSV THRFSTKSWL SQVCHVCQKS MMFGVKCKHC 301 350 ENSP00000381958/1-762 RLKCHNKCTK EAPACRISFL PLTRLRRTES VPSDINNPVD RAAEPHFGTL ENSBTAP00000008672/1-848 RLKCHNKCTK EAPACRISFL PLPKLRRTES VPSDINNPVD RAAEPHFGTL ENSTTRP00000007672/1-841 RLKCHNKCTK EAPACRISFL PLPRLRRTES VPSDINNPVD RAAEPHFGTL bmy_15634T0/1-577 RLKCHNKCTK EAPACRISFL PLPRLRRTES VPSDINNPVD RAAEPHFGTL BACU010518/1-842 RLKCHNKCTK EAPACRISFL PLPRLRRTES VPSDINNPVD RAAEPHFGTL 351 400 ENSP00000381958/1-762 PKALTKKEHP PAMNHLDSSS NPSSTTSSTP SSPAPFPTSS NPSSATTPPN ENSBTAP00000008672/1-848 PKALTKKEHP PAMNHLDSSS NPSSTTSSTP SSPAPFPASS NPSSATTPPN ENSTTRP00000007672/1-841 PKALTKKEHP LAMNHLDSSS NPSSTTSSTP SSPAPFPTSS NPPSATTPPN bmy_15634T0/1-577 PKALTKKEHP LAMNHLDSSS NPSSTTSSTP SSPAPFPTSS NPPSATTPPN BACU010518/1-842 PKALTKKEHP LAMNHLDSSS NPSSTTSSTP SSPAPFPTSS NPPSATTPPN 401 450 ENSP00000381958/1-762 PSPGQRDSRF N--------- ---------- ---------- ---------- ENSBTAP00000008672/1-848 PSPGQRDGRF N--------- ---------- ---------- ---------- ENSTTRP00000007672/1-841 PSPGQRDGRF N--------- ---------- ---------- ---------- bmy_15634T0/1-577 PSPGQRDGRF N--------- ---------- ---------- ---------- BACU010518/1-842 PSPGQRDGRF NFPGGEGWGA GGAGRSLPLP VSLVLQEHPL AMNHLDSSSN 451 500 ENSP00000381958/1-762 ---------- ---------- ---------- ---------- FPAAYFIHHR ENSBTAP00000008672/1-848 ---------- ---------- ---------- ---------- FPAAYFIHHR ENSTTRP00000007672/1-841 ---------- ---------- ---------- ---------- FPAAYYMHPR bmy_15634T0/1-577 ---------- ---------- ---------- ---------- ---------- BACU010518/1-842 PSSTTSSTPS SPAPFPTSSN PPSATTPPNP SPGQRDGRFN FPAAYYIHHR 501 550 ENSP00000381958/1-762 QQFIFPVPSA GHCWKCLLIA ESLKENAF-- NISAFAHAAP LPEAADGTRL ENSBTAP00000008672/1-848 QQFIFPAPSA GRCWKCLP-C RKLKENLFPP DISAFPQAAP FTDGADSSRL ENSTTRP00000007672/1-841 QQFIFPAPSA GSCW-CLR-A ESLKEENF-- NISAFPQAAP FAE-ADSSRL bmy_15634T0/1-577 ----FP---- ---------- ---------- DISAFPPAVP FAE-ADSSRL BACU010518/1-842 QQFIFP---- ---------- ---------- DISAFPPPVP LTE-ADSSRL 551 600 ENSP00000381958/1-762 DDQPKADVLE AHEAEAEEPE AGKSEAEDDE DEVDDLPSSR RPWRGPISRK ENSBTAP00000008672/1-848 DDQPKADVLE DHEVEAEEPE AGKSEAEDDE DEVDDLPTSR RPWRGPISRK ENSTTRP00000007672/1-841 ENPPKADVSE DREVEAEEPE AGRSEVEDDE DELDDLPSSR RPWRGPISRK bmy_15634T0/1-577 ENQPKADVSE DHEVEAEEPE AGKSEVEDDE DEVDDLPSSR RPWRGPISRK BACU010518/1-842 ENQPKADVSE DHEVEAEEPE AGKSEVEDDE DEVDDLPSSR RPWRGPISRK 601 650 ENSP00000381958/1-762 ASQTSVYLQE WDIPFEQVEL GEPIGQGRWG RVHRGRWHGE VAIRLLEMDG ENSBTAP00000008672/1-848 ASQTSVYLQE WDIPFEQVEL GEPIGQGRWG RVHRGRWHGE VAIRLLEMDG ENSTTRP00000007672/1-841 ASQTSVYLQE WDIPFEQVEL GEPIGQGRWG RVHRGRWHGE VAIRLLEMDG bmy_15634T0/1-577 ASQTSVYLQE WDIPFEQVEL GEPIGQGRWG RVHRGRWHGE VAIRLLEMDG BACU010518/1-842 ASQTSVYLQE WDIPFEQVEL GEPIGQGRWG RVHRGRWHGE AAIRLLEMDG 651 700 ENSP00000381958/1-762 HNQDHLKLFK KEVMNYRQTR HENVVLFMGA CMNPPHLAII TSFCKGRTLH ENSBTAP00000008672/1-848 HNQDHLKLFK KEVMNYRQTR HENVVLFMGA CMNPPHLAII TSFCKGRTLH ENSTTRP00000007672/1-841 HNQDHLKLFK KEVMNYRQTR HENVVLFMGA CMNPPHLAII TSFCKGRTLH bmy_15634T0/1-577 HNQDHLKLFK KEVMNYRQTR HENVVLFMGA CMNPPHLAII TSFCKGRTLH BACU010518/1-842 HNQDHLKLFK KEVMNYRQTR HENVVLFMGA CMNPPHLAII TSFCKGRTLH 701 750 ENSP00000381958/1-762 SFVRDPKTSL DINKTRQIAQ EIIKGMGYLH AKGIVHKDLK SKNVFYDNGK ENSBTAP00000008672/1-848 SFVRDPKTSL DINKTRQIAQ EIIKGMGYLH AKGIVHKDLK SKNVFYDNGK ENSTTRP00000007672/1-841 SFVRDPKTSV DINKTRQIAQ EIIKGMGYLH AKGIVHKDLK SKNVFYDNGK bmy_15634T0/1-577 SFVRDPKTSV DINKTRQIAQ EIIKGMGYLH AKGIVHKDLK SKNVFYDNGK BACU010518/1-842 SFVRDPKTSV DINKTRQIAQ EIIKGMGYLH AKGIVHKDLK SKNVFYDNGK 751 800 ENSP00000381958/1-762 VVITDFGLFG ISGVVREGRR ENQLKLSHDW LCYLAPEIVR EMTPGKDEDQ ENSBTAP00000008672/1-848 VVITDFGLFG ISGVVREGRR ENQLKLSHDW LCYLAPEIVR EMTPGKDEDQ ENSTTRP00000007672/1-841 VVITDFGLFG ISGVVREGRR ENQLKLSHDW LCYLAPEIVR EMTPGKDEDQ bmy_15634T0/1-577 VVITDFGLFG ISGVVREGRR ENQLKLSHDW LCYLAPEIVR EMTPGKDEDQ BACU010518/1-842 VVITDFGLFG ISGVVREGRR ENQLKLSHDW LCYLAPEIVR EMTPGKDEDQ 801 850 ENSP00000381958/1-762 LPFSKAADVY AFGTVWYELQ ARDWPLKNQA AEASIWQIGS GEGMKRVLTS ENSBTAP00000008672/1-848 LPFSKAADVY AFGTVWYELQ ARDWPFKNQA AEALIWQIGS GEGMKRVLAS ENSTTRP00000007672/1-841 LPFSKAADVY AFGTVWYELQ ARDWPLKNQA VEALIWQVGS GEGMKRVLAS bmy_15634T0/1-577 LPFSKAADVY AFGTVWYELQ ARDWPLKNQA AEALIWQIGS GEGMKRVLAS BACU010518/1-842 LPFSKAADVY AFGTVWYELQ ARDWPLKNQA AEALIWQIGS GEGMKRVLAS 851 900 ENSP00000381958/1-762 VSLGKEVSEI LSACWAFDLQ ERPSFSLLMD MLEKLPKLNR RLSHPGHFWK ENSBTAP00000008672/1-848 ISLGKEVTEI LSACWAFDLQ ERPSFPLLMD MLEKLPKLNR RLSHPGHFWK ENSTTRP00000007672/1-841 VSLGKEVTEI LSACWAFDLQ ERPSFPLLMD MLEKLP-LIR SSSHPGHS-E bmy_15634T0/1-577 VSLGKEVTEI LSTCWAFDLQ ERPSFPLLMD MLEKLPKLNR RLSHPGHFWK BACU010518/1-842 VSLGKEVTEI LSNCWAFDLQ ERPSFPLLMD MLEKLPKLNR RLSHPGHFWK 901 950 ENSP00000381958/1-762 SAE------- ---------- ---------- ---------- ---------- ENSBTAP00000008672/1-848 SAD------- ---------- ---------- INSSKVVPRF ERFGLGILES ENSTTRP00000007672/1-841 SAD------- ---------- ---------- INSSKVVPRF ERFGLGVLES bmy_15634T0/1-577 SAERWRSRYY GKGRYGHPDF KNNCPVLEEY INSNKVVPRF ERFGLGVLES BACU010518/1-842 SAD------- ---------- ---------- INSNKVVPRF ERFGLGVLES 951 1000 ENSP00000381958/1-762 ----L ENSBTAP00000008672/1-848 SNPKM ENSTTRP00000007672/1-841 SNPKM bmy_15634T0/1-577 SNPKM BACU010518/1-842 SNPKM