KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:58 2014 Check: 00 .. Name: ENSP00000360683/1-435 Len: 438 Check: 4319 Weight: 1.00 Name: ENSBTAP00000008678/1-425 Len: 438 Check: 9743 Weight: 1.00 Name: ENSTTRP00000013532/1-428 Len: 438 Check: 6499 Weight: 1.00 Name: bmy_02942T0/1-422 Len: 438 Check: 6935 Weight: 1.00 Name: BACU020189/1-399 Len: 438 Check: 1371 Weight: 1.00 // 1 50 ENSP00000360683/1-435 MEMEKEFEQI DKSGSWAAIY QDIRHEASDF PCRVAKLPKN KNRNRYRDVS ENSBTAP00000008678/1-425 MEMEKEFEQI DRAGSWAAIY QDIRHEASDF PCRVAKLPKN KNRNRYRDVS ENSTTRP00000013532/1-428 MEMEKEFEQI DKAGSWAAIY QDIRHEASDF PCRVAKLPKN KNRNRYRDVS bmy_02942T0/1-422 MEMEKEFEQI DKAGSWAAIY QDIRHEASDF PCRVAKLPKN KNRNRYRDVS BACU020189/1-399 ---------- ---------- -DIRHEASDF PCRVAKLPKN KNRNRYRDVS 51 100 ENSP00000360683/1-435 PFDHSRIKLH QEDNDYINAS LIKMEEAQRS YILTQGPLPN TCGHFWEMVW ENSBTAP00000008678/1-425 PFDHSRIKLH QEDNDYINAS LIKMEEAQRS YILTQGPLPN TCGHFWEMVW ENSTTRP00000013532/1-428 PFDHSRIKLH QEDNDYINAS LIKMEEAQRS YILTQGPLPN TCGHFWEMVW bmy_02942T0/1-422 PFDHSRIKLH QEDNDYINAS LIKMEEAQRS YILTQGPLPN TCGHFWEMVW BACU020189/1-399 PFDHSRIKLH QEDNDYINAS LIKMEEAQRS YILTQGPLPN TCGHFWEMVW 101 150 ENSP00000360683/1-435 EQKSRGVVML NRVMEKGSLK CAQYWPQKEE KEMIFEDTNL KLTLISEDIK ENSBTAP00000008678/1-425 EQKSRGVVML NRVMEKGSLK CAQYWPQKEE REMVFEDTNL KLTLISEDIK ENSTTRP00000013532/1-428 EQKSRGVVML NRVMEKGSLK CAQYWPQKEE EEMIFEDTNL KLTLISEDIK bmy_02942T0/1-422 EQKSRGVVML NRVMEKGSLK CAQYWPQKEE EEMIFEDTNL KLTLVSEDIK BACU020189/1-399 EQKSRGVVML NRVMEKGSLK CAQYWPQKEE EEMIFEDTNL KLTLISEDIK 151 200 ENSP00000360683/1-435 SYYTVRQLEL ENLTTQETRE ILHFHYTTWP DFGVPESPAS FLNFLFKVRE ENSBTAP00000008678/1-425 SYYTVRQLEL ENLMSRETRE ILHFHYTTWP DFGVPESPAS FLNFLFKVRE ENSTTRP00000013532/1-428 SYYTVRQLEL ENLTSQETRE ILHFHYTTWP DFGVPESPAS FLNFLFKVRE bmy_02942T0/1-422 SYYTVRQLEL ENLTSQETRE ILHFHYTTWP DFGVPESPAS FLNFLFKVRE BACU020189/1-399 SYYTVRQLEL ENLTSQETRE ILHFHYTTWP DFGVPESPAS FLNFLFKVRE 201 250 ENSP00000360683/1-435 SGSLSPEHGP VVVHCSAGIG RSGTFCLADT CLLLMDKRKD PSSVDIKKVL ENSBTAP00000008678/1-425 SGSLSREHGP IVVHCSAGIG RSGTFCLADT CLLLMDKRKD PSSVDIKKVL ENSTTRP00000013532/1-428 SGSLSMEYGP IVVHCSAGIG RSGTFCLADT CLLLMDKRKD PSSVDIKKVL bmy_02942T0/1-422 SGSLSTEYGP IVVHCSAGIG RSGTFCLADT CLLLMDKRKD PSSVDIKKVL BACU020189/1-399 SGSLSTEYGP IVVHCSAGIG RSGTFCLADT CLLLMDKRKD PSSVDIKKVL 251 300 ENSP00000360683/1-435 LEMRKFRMGL IQTADQLRFS YLAVIEGAKF IMGDSSVQDQ WKELSHEDLE ENSBTAP00000008678/1-425 LEMRKFRMGL IQTADQLRFS YLAVIEGAKF IMGDSSVQEQ WKELSHEDLE ENSTTRP00000013532/1-428 LEMRKFRMGL IQTADQLRFS YLAVIEGAKF IMGDSSVQEQ WKELSHEDLE bmy_02942T0/1-422 LEMRKFRMGL IQTADQLRFS YLAVIEGAKF IMGDSSVQEQ WKELSHEDLE BACU020189/1-399 LEMRKFRMGL IQTADQLRFS YLAVIEGAKF IMGDSSVQEQ WKELSHEDLE 301 350 ENSP00000360683/1-435 PPPEHIPPPP RPPKRILEPH NGKCREFFPN HQWVKEETQE D--KDCPIKE ENSBTAP00000008678/1-425 PPPEHVPPPP RPPKRVLEPH NGKCKEFFPN HQWVKDDTEE EDKEDGPVQE ENSTTRP00000013532/1-428 PPPEHIPPPP RPPKRILEPH NGKCKEFFAN HQWVTAETEE V-KEDGPVKE bmy_02942T0/1-422 PPPEHIPPPP RPPKRILEPH NGKCKEFFPN HQWVKDETEE V-KEDGPIKE BACU020189/1-399 PPPEHIPPPP RPPKRILEPH NGKCKEFFPN HQWVKDETEE V-KEDGPVKE 351 400 ENSP00000360683/1-435 EKGSPLNAAP YGIESMSQDT EVRSRVVGGS LRGAQAASPA KGEPSLPEKD ENSBTAP00000008678/1-425 ATRAPLNA-P CSLESASQDT EVRRRVVG-- ------ADPA QGEPSLPAEE ENSTTRP00000013532/1-428 ETRTLLTA-P CSLESASQDT EVRRRVAG-- ------AGPA QGEPSLPKEE bmy_02942T0/1-422 ETRTLLNV-P CSLESASQDT EVRRRVVG-- ------AGPA QGEPSPSKEE BACU020189/1-399 ETRTLLNV-P CSLESASQDT EVRRRVVG-- ------AGPA QGEPLPSKEE 401 450 ENSP00000360683/1-435 EDHALSYWKP FLVNMCVATV LTAGAYLCYR FLFNSNT- ENSBTAP00000008678/1-425 RDQPLSHWKP FLVNVCVATV LTAGAYLCYR VCFH---- ENSTTRP00000013532/1-428 QDQAPTHWKP FLVNVCVATV LTAGAYLCYR FLLDSHTQ bmy_02942T0/1-422 QDQAPTHWKP FLVNVCVATV LTAGAYLCYR VV------ BACU020189/1-399 QDQAPTHWKP FLVNVCVATV LTAGAYLCYR --------