KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:36:01 2014 Check: 00 .. Name: ENSP00000310668/1-819 Len: 853 Check: 422 Weight: 1.00 Name: ENSBTAP00000008683/1-819 Len: 853 Check: 6645 Weight: 1.00 Name: BACU001846/1-819 Len: 853 Check: 9430 Weight: 1.00 Name: bmy_12185T0/1-426 Len: 853 Check: 3405 Weight: 1.00 Name: ENSTTRP00000004070/1-817 Len: 853 Check: 6109 Weight: 1.00 // 1 50 ENSP00000310668/1-819 MDTEGFGELL QQAEQLAAET EGISELPHVE RNLQEIQQAG ERLRSRTLTR ENSBTAP00000008683/1-819 MDTEGFGELL QQAEQLAAET EGISELPHVE RNLQEIQQAG ERLRSRTLTR BACU001846/1-819 MDTEGFGELL QQAEQLAAET EGISELPHVE RNLQEIQQAG ERLRSRTLTR bmy_12185T0/1-426 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004070/1-817 MDTEGFGELL QQAEQLAAET EGISELPHVE RNLQEIQQAG ERLRSRTLTR 51 100 ENSP00000310668/1-819 TSQETADVKA SVLLGSRGLD ISHISQRLES LSAATTFEPL EPVKDTDIQG ENSBTAP00000008683/1-819 TSQETADVKA SVLLGSRGLD ISHISQRLES LSAATTFEPL EPVKDTDIQG BACU001846/1-819 TSQETADVKA SVLLGSRGLD ISHISQRLES LSAATTFEPL EPVKDTDIQG bmy_12185T0/1-426 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004070/1-817 TSQETADVKA SVLLGSRGLD ISHISQRLES LSAATTFEPL EPVKDTDIQG 101 150 ENSP00000310668/1-819 FLKNEKDNAL LSAIEESRKR TFGMAEEYHR ESMLVEWEQV KQRILHTLLA ENSBTAP00000008683/1-819 FLKNEKDNAL LSAIEESRKR TFGMAEEYHR ESMLVEWEQV KQRILHTLLA BACU001846/1-819 FLKNEKDNAL LSAIEESRKR TFGMAEEYHR ESMLVEWEQV KQRILHTLLA bmy_12185T0/1-426 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004070/1-817 FLKNEKDNAL LSAIEES--R TFGMAEEYHR ESMLVEWEQV KQRILHTLLA 151 200 ENSP00000310668/1-819 SGEDALDFTQ ESEPSYISDV GPPGRSSLDN IEMAYARQIY IYNEKIVNGH ENSBTAP00000008683/1-819 SGEDALDFTQ ESEPSYISDA GPPGRSSLDS IEMAYARQIY IYNEKIVNGH BACU001846/1-819 SGEDALDFTQ ESEPSYISDA GPPGRSSLDS IEMAYARQIY IYNEKIVNGH bmy_12185T0/1-426 ---------- ---------- ---------- ---------- MYNAN----- ENSTTRP00000004070/1-817 SGEDALDFTQ ESEPSYISDA GPPGRSSLDS IEMAYARQIY IYNEKIVNGH 201 250 ENSP00000310668/1-819 LQPNLVDLCA SVAELDDKSI SDMWTMVKQM TDVLLTPATD ALKNRSSVEV ENSBTAP00000008683/1-819 LQPNLLDLCA SVTELDDKNI SDMWAMVKQM TDVLLVPATD ALKSRNSVEV BACU001846/1-819 LQPNLVDLCA SVTELDDKNI SDMWTMVKQM TDVLLTPATD ALKSRNSVEV bmy_12185T0/1-426 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004070/1-817 LQPNLVDLCA SVTELDDKNI SDMWTMVKQM TDVLLTPATD ALKSRNSVEV 251 300 ENSP00000310668/1-819 RMEFVRQALA YLEQSYKNYT LVTVFGNLHQ AQLGGVPGTY QLVRSFLNIK ENSBTAP00000008683/1-819 RMEFVRQALG YLEQSYKNYT LVTVFGNLHQ AQLGGVPGTY QLVRSFLNIK BACU001846/1-819 RMEFVRQALG YLEQSYKNYT LVTVFGNLHQ AQLGGVPGTY QLVRSFLNIK bmy_12185T0/1-426 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004070/1-817 RMEFVRQALG YLEQSYKNYT LVTVFGNLHQ AQLGGVPGTY QLVRSFLNIK 301 350 ENSP00000310668/1-819 LPAPLPGLQD GEVEGHPVWA LIYYCMRCGD LLAASQVVNR AQHQLGEFKT ENSBTAP00000008683/1-819 LPAPLPGLQD GEVEGHPVWA LIYYCMRCGD LLAASQVVNR AQHQLGEFKT BACU001846/1-819 LPAPLPGLQD GEVEGHPVWA LIYYCLRCGD LLAASQVVNR AQHQLGEFKT bmy_12185T0/1-426 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004070/1-817 LPAPLPGLQX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 351 400 ENSP00000310668/1-819 WFQEYMNSKD RRLSPATENK LRLHYRRALR NNTDPYKRAV YCIIGRCDVT ENSBTAP00000008683/1-819 WFQEYMNSKD RRLSPATENK LRLHYRRALR NNTDPYKRAV YCIIGRCDVT BACU001846/1-819 WFQEYMNSKD RRLSPATENK LRLHYRRALR NNTDPYKRAV YCIIGRCDVT bmy_12185T0/1-426 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004070/1-817 XXXXXXXXXX XXLSPATENK LRLHYRRALR NNTDPYKRAV YCIIGRCDIT 401 450 ENSP00000310668/1-819 DNQSEVADKT EDYLWLKLNQ VCFDDDGTSS PQDRLTLSQF QKQLLEDYGE ENSBTAP00000008683/1-819 DNQSEVADKT EDYLWLKLNQ VCFDDDGTSS PQDRLTLSQF QKQLLEDYGE BACU001846/1-819 DNQSEVADKT EDYLWLKLNQ VCFDDDGTSS PQDRLTLSQF QKQLLEDYGE bmy_12185T0/1-426 ---------- ------KLNQ VCFDDDGTSS PQDRLTLSQF QKQLLEDYGE ENSTTRP00000004070/1-817 DNQSEVADKT EDYLWLKLNQ VCFDDDGTSS PQDRLTLSQF QKQLLEDYGE 451 500 ENSP00000310668/1-819 SHFTVNQQPF LYFQVLFLTA QFEAAVAFLF RMERLRCHAV HVALVLFELK ENSBTAP00000008683/1-819 SHFTVNQQPF LYFQVLFLTA QFEAAIAFLF RMERLRCHAV HVALVLFELK BACU001846/1-819 SHFTVNHQPF LYFQVLFLTA QFEAAIAFLF RMERLRCHAV HVALVLFELK bmy_12185T0/1-426 SHFTVNHQPF LYFQVLFLTA QFEAAIAFLF RMERLRCHAV HVALVLFELK ENSTTRP00000004070/1-817 SHFTVNHQPF LYFQVLFLTA QFEAAIAFLF RMERLRCHAV HVALVLFELK 501 550 ENSP00000310668/1-819 LLLKSSGQSA QLLSHEPGDP PCLRRLNFVR LLMLYTRKFE STDPREALQY ENSBTAP00000008683/1-819 LLLKSSGQSA QLLSHEPGDP PCMRRLNFVR LLMLYTRKFE STDPREALQY BACU001846/1-819 LLLKSSGQSA QLLSHEPGDP PCMRRLNFVR LLILYTRKFE STDPREALQY bmy_12185T0/1-426 LLLKSSGQSA QLLSHEPGDP PCMRRLNFVR LLILYTRKFE STDPREALQY ENSTTRP00000004070/1-817 LLLKSSGQSA QLLSHEPGDP PCMRRLNFVR LLILYTRKFE STDPREALQY 551 600 ENSP00000310668/1-819 FYFLRDEKDS QGENMFLRCV SELVIESREF DMILGKLEND GSRK------ ENSBTAP00000008683/1-819 FYFLRDEKDS QGENMFLRCV SELVIESREF DMILGKLEND GSRK------ BACU001846/1-819 FYFLRDEKDS QGENMFLRCV SELVIESREF DMILGKLEND GSRK------ bmy_12185T0/1-426 FYFLRDEKDS QGENMFLRCV SELVIESREF DMILGKLEND GSRKCLLISK ENSTTRP00000004070/1-817 FYFLRDEKDS QGENMFLRCV SELVIESREF DMILGKLEND GSRK------ 601 650 ENSP00000310668/1-819 ---------- ---------- --------PG VIDKFTSDTK PIINKVASVA ENSBTAP00000008683/1-819 ---------- ---------- --------PG VIDKFTSDTK PIINKVASVA BACU001846/1-819 ---------- ---------- --------PG VIDKFTSDTK PIINKVASVA bmy_12185T0/1-426 IKTIDDFTNS LAVSPHFSLP PLHNLSCQPG VIDKFTSDTK PIINKVASVA ENSTTRP00000004070/1-817 ---------- ---------- --------PG VIDKFTSDTK PIINKVASVA 651 700 ENSP00000310668/1-819 ENKGLFEEAA KLYDLAKNAD KVLELMNKLL SPVVPQISAP QSNKERLKNM ENSBTAP00000008683/1-819 ENKGLFEEAA KLYDLAKNAD KVLELMNKLL SPIVPQISAP QSNKERLKNM BACU001846/1-819 ENKGLFEEAA KLYDLAKNAD KVLELMNKLL SPVVPQISAP QSNKERLKNM bmy_12185T0/1-426 ENKGLFEEAA KLYDLAKNAD KVLELMNKLL SPVVPQISAP Q--------- ENSTTRP00000004070/1-817 ENKGLFEEAA KLYDLAKNAD KVLELMNKLL SPVVPQISAP QSNKERLKNM 701 750 ENSP00000310668/1-819 ALSIAERYRA QGISANKFVD STFYLLLDLI TFFDEYHSGH IDRAFDIIER ENSBTAP00000008683/1-819 ALSIAERYRA QGISANKFVD STFYLLLDLI TFFDEYHSGH IDRAFDIIDR BACU001846/1-819 ALSVAERYRA QGISANKFVD STFYLLLDLI TFFDEYHSGH IDRAFDIIDR bmy_12185T0/1-426 -------YRA QGISANKFVD STFYLLLDLI TFFDEYHSGH IDRAFDIIDR ENSTTRP00000004070/1-817 ALSVAERYRA QGISANKFVD STFYLLLDLI TFFDEYHSGH IDRAFDIIDR 751 800 ENSP00000310668/1-819 LKLVPLNQES VEERVAAFRN FSDEIRHNLS EVLLATMNIL FTQFKRLKGT ENSBTAP00000008683/1-819 LKLVPLNQES VEERVAAFRN FSDEIRHNLS EVLLATMNIL FTQFKRLKGT BACU001846/1-819 LKLVPLNQES VEERVAAFRN FSDEVRHNLS EVLLATMNIL FTQFKRLKGT bmy_12185T0/1-426 LKLVPLNQES VEERVAAFRN FSDEVRHNLS EVLLATMNIL FTQFKRLKGT ENSTTRP00000004070/1-817 LKLVPLNQES VEERVAAFRN FSDEVRHNLS EVLLATMNIL FTQFKRLKGT 801 850 ENSP00000310668/1-819 SPSSSSRPQR VIEDRDSQLR SQARTLITFA GMIPYRTSGD TNARLVQMEV ENSBTAP00000008683/1-819 SPSSATRPQR VIEDRDSQLR SQARALITFA GMIPYRTSGD TNARLVQMEV BACU001846/1-819 SPSSASRPQR VIEDRDSQLR SQARALITFA GMIPYRTSGD TNARLVQMEV bmy_12185T0/1-426 SPSSASRPQR VIEDRDSQLR SQARALITFA GMIPYRTSGD TNARLVQMEV ENSTTRP00000004070/1-817 SPSSASRPQR VIEDRDSQLR SQARALITFA GMIPYRTSGD TNARLVQMEV 851 900 ENSP00000310668/1-819 LMN ENSBTAP00000008683/1-819 LMN BACU001846/1-819 LMN bmy_12185T0/1-426 LMN ENSTTRP00000004070/1-817 LMN