KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:36:01 2014 Check: 00 .. Name: ENSP00000366942/1-511 Len: 521 Check: 5480 Weight: 1.00 Name: ENSBTAP00000008692/1-480 Len: 521 Check: 7071 Weight: 1.00 Name: ENSTTRP00000000472/1-471 Len: 521 Check: 5537 Weight: 1.00 Name: bmy_10537T0/1-434 Len: 521 Check: 9562 Weight: 1.00 Name: BACU013095/1-442 Len: 521 Check: 6880 Weight: 1.00 // 1 50 ENSP00000366942/1-511 ---------M SLLGRDYNSE LNSLDNGPQS PSESSSSITS ENVHPAGEA- ENSBTAP00000008692/1-480 RHHPPTMLKI SLLARDNTSK PKSLDDGSKS LSESSSSITS ERIHPAEEAN ENSTTRP00000000472/1-471 ---------I SLLARDNNSE PKSLDDGAKS LSESRSSITS ESVRPEEEAN bmy_10537T0/1-434 ------MLKI SLLARDNNSE PKSLDDGSK- ---------- ---------- BACU013095/1-442 ------MLKI SLLARDTNSE PKALDDGSKS LSESSSSITS ESVRPEEEAN 51 100 ENSP00000366942/1-511 GLSMMQTLIH LLKCNIGTGL LGLPLAIKNA GLLVGPVSLL AIGVLTVHCM ENSBTAP00000008692/1-480 GLSMMQTLIH LLKCNIGTGL LGLPLAMKNA GLLVGPFSLL AIGILTVHCM ENSTTRP00000000472/1-471 GLSIMQTLIH LLKCNIGTGL LGLPLAVKNA GLLVGPFSLL AIGILTVHCM bmy_10537T0/1-434 ---IMQTLIH LLKCNIGTGL LGLPLAMKNA GLLVGPFSLL AIGILTVHCM BACU013095/1-442 GLSIMQTLIH LLKCNIGTGL LGLPLAMKNA GLLVGPFSLL AIGILTVHCM 101 150 ENSP00000366942/1-511 VILLNCAQHL SQRLQKTFVN YGEATMYGLE TCPNTWLRAH AVWGRWNLAL ENSBTAP00000008692/1-480 VILLNCAHHL SQRLQKTFVN YGEAMMYSLE TCPNAWLRTH SVWG------ ENSTTRP00000000472/1-471 VILLNCAHCL SQRLQKTFVN YGEAMMYSLE TCPSAWLRTH SVWG------ bmy_10537T0/1-434 VILLNCAHHL SQRLQKTFVN YGEAMMYSLE TCPNAWLRTH SVWG------ BACU013095/1-442 VILLNCAHHL SQ-------- ---------- ---------- ---------- 151 200 ENSP00000366942/1-511 SPRLECSGKI SAHCNPHLQG SSNSPAQASR VAGIYRYTVS FLLVITQLGF ENSBTAP00000008692/1-480 ---------- ---------- ---------- -----RYTVS FLLITTQLGF ENSTTRP00000000472/1-471 ---------- ---------- ---------- -----RYTVS FLLIITQLGF bmy_10537T0/1-434 ---------- ---------- ---------- -----RYTVS FLLIITQLGF BACU013095/1-442 ---------- ---------- ---------- -----RYTVS FLLIITQLGF 201 250 ENSP00000366942/1-511 CSVYFMFMAD NLQQMVEKAH VTSNICQPRE ILTLTPILDI RFYMLIILPF ENSBTAP00000008692/1-480 CSVYFMFMAD NLQQMVEEVH VTSKTCEPRK ILVLTPNVDI RFYMLTILPF ENSTTRP00000000472/1-471 CSVYFMFMAD NLQQMVEEAY VTSNTCQPRK ILVLTPTLDI RFYMLAILPF bmy_10537T0/1-434 CSVYFMFMAD NLQQ------ ---------- ILVLTPTLDI RFYMLTILPF BACU013095/1-442 CSVYFMFMAD NLQQMVEEAY VTSNTCQPRK ILVLTPTLDI RFYMLTILPF 251 300 ENSP00000366942/1-511 LILLVFIQNL KVLSVFSTLA NITTLGSMAL IFEYIMEGIP YPSNLPLMAN ENSBTAP00000008692/1-480 LILLVFIQNL RVLSIFSTLA NITTLGSMAL IFQYIMQEIP DPRNLPLMAS ENSTTRP00000000472/1-471 LILLVFIQNL RVLSVFSTLA SITTLWSMAL IFEYIVQEIP DPRNLPLMAS bmy_10537T0/1-434 LTLLVFIQNL RVLSVFSTLA NITTLGSMAL IFEYIVQEIP DPRNLPLMAS BACU013095/1-442 LTLLVFIQNL RILSIFSALA NITTLGSMAL IFEYIVQEIP DPRNLPLMAS 301 350 ENSP00000366942/1-511 WKTFLLFFGT AIFTFEGVGM VLPLKNQMKH PQQFSFVLYL GMSIVIILYI ENSBTAP00000008692/1-480 WKTFLLFFGT AIFTFEGVGM VLPLKNQMKH PQQFSFVLYW GMSLVIVLYI ENSTTRP00000000472/1-471 WKTFLLFFGT AIFTFEGVGM VLSLKNQMKH PQQFSFVLYF GMSLVIVLYI bmy_10537T0/1-434 WKTFLLFFGT AIFTFEGVGM VLSLKNQMKH PQQFSFVLYL GMSLVIVLYI BACU013095/1-442 WKTFLLFFGT AIFTFEGVGM VLSLKNQMKH PQQFSFVLYL GMSLVIVLYI 351 400 ENSP00000366942/1-511 LLGTLGYMKF GSDTQASITL NLPNCWLYQS VKLMYSIGIF FTYALQFHVP ENSBTAP00000008692/1-480 CLGTLGYMKF GSNTQASITL NLPNCWLYQS VKLMYSIGIF FTYALQFHVP ENSTTRP00000000472/1-471 CLGTLGYMKF GSNTQASITR NLPNCWLYQS VKLMYSIGIF FTYALQFHVP bmy_10537T0/1-434 CLGTLGYMKF GSNTQASITL NLPNCWLYQS VKLMYSIGIF FTYALQFHVP BACU013095/1-442 CLGTLGYMKF GSNTQASITL NLPNCWLYQS VKLMYSIGIF FTYALQFHVP 401 450 ENSP00000366942/1-511 AEIIIPFAIS QVSESWALFV DLSVRSALVC LTCVSAILIP RLDLVISLVG ENSBTAP00000008692/1-480 AEIIIPVIIS QVSETWALFA DLSVRTALVC LTCVSAILIP RLDLVISLVG ENSTTRP00000000472/1-471 TEIIIPVVIS QASESWVLFA DLSVRTALVC LTCVSAILIP RLDLVISLVG bmy_10537T0/1-434 AEIVIPVVIS QVSESWVLFA DLSVRTALVC LTCVSAILIP RLDLVISLVG BACU013095/1-442 AELIIPVVIS QVSESRVLFA DLSVRTALVC LTCVSAILIP RLDLVISLVG 451 500 ENSP00000366942/1-511 SVSSSALALI IPALLEIVIF YSEDMSCVTI AKDIMISIVG LLGCIFGTYQ ENSBTAP00000008692/1-480 SVSSSALALI IPPFLELITF YPEDMNCITI VKDIMISILG LLGCVFGTYQ ENSTTRP00000000472/1-471 SVSSSALALI IPPLLELITF YPEDMSCVTI AKDIMISILG LLGCVFGTYQ bmy_10537T0/1-434 SVSSSALALI IPPLLELITF YPEDMSCVTI AKDIMISILG LLGCVFGTYQ BACU013095/1-442 SVSSSALALI IPPLLELITF YPEDMSCVTI AKDIMISILG LLGCVFGTYQ 501 550 ENSP00000366942/1-511 ALYELPQPIS HSMANSTGVH A ENSBTAP00000008692/1-480 ALYELTQPIN HSVANSTGVY A ENSTTRP00000000472/1-471 ALCELIQPIN YSIANSTAVY A bmy_10537T0/1-434 ALYELIQPIN HSIANSTAVY A BACU013095/1-442 VLYELIQPIN HSIANSTAVY A