KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:36:03 2014 Check: 00 .. Name: ENSP00000228682/1-1106 Len: 1106 Check: 1196 Weight: 1.00 Name: ENSBTAP00000008704/1-1105 Len: 1106 Check: 95 Weight: 1.00 Name: ENSTTRP00000012416/1-1106 Len: 1106 Check: 9908 Weight: 1.00 Name: BACU008154/1-1077 Len: 1106 Check: 8763 Weight: 1.00 Name: bmy_03884T0/1-1071 Len: 1106 Check: 632 Weight: 1.00 // 1 50 ENSP00000228682/1-1106 MFNSMTPPPI SSYGEPCCLR PLPSQGAPSV GTEGLSGPPF CHQANLMSGP ENSBTAP00000008704/1-1105 MFNSMTPPPV SSYGEPCCLR PLPSQGAPGM GTEGLPGLPF CHQATLMPGP ENSTTRP00000012416/1-1106 MFNSMTPPPV SSYGEPCCLR PLPSQGAPSM GTEGLPGLPF CHQATLMSGP BACU008154/1-1077 ---------- ---------- ---------M GTEGLPGLPF CHQATLMSGP bmy_03884T0/1-1071 MFNSMTPPPV SSYGEPCCLR PLPSQGAPSM GTEGLPGLPF CHQATLMSGP 51 100 ENSP00000228682/1-1106 HSYGPARETN SCTEGPLFSS PRSAVKLTKK RALSISPLSD ASLDLQTVIR ENSBTAP00000008704/1-1105 HSYGPAREAN SCTEVPLFPP PRSAVKLTKK RALSISPLSD TSLDLQTVIR ENSTTRP00000012416/1-1106 HSYGPARETS SCTEAPLFPP PRSAVKLTKK RALSISPLSD ASLDLQTVIR BACU008154/1-1077 HSYGPARETS SCTEAPLFPP PRSAVKLTKK RALSISPLSD ASLDLQTVIR bmy_03884T0/1-1071 HSYGPARETS SCTEAPLFPP PRSAVKLTKK RALSISPLSD ASLDLQTVIR 101 150 ENSP00000228682/1-1106 TSPSSLVAFI NSRCTSPGGS YGHLSIGTMS PSLGFPAQMN HQKGPSPSFG ENSBTAP00000008704/1-1105 TSPSSLVAFI NSRCASPGGS YGHLSIGTMS PSLGFSPQMN HQKGTSPSFG ENSTTRP00000012416/1-1106 TSPSSLVAFI NSRCASPGGS YGHLSIGTMS PSLGFSPQMN HQKGTSPSFG BACU008154/1-1077 TSPSSLVAFI NSRCASPGGS YGHLSIGTMS PSLGFSPQMN HQKGTSPSFG bmy_03884T0/1-1071 TSPSSLVAFI NSRCASPGGS YGHLSIGTMS PSLGFSPQMN HQKGTSPSFG 151 200 ENSP00000228682/1-1106 VQPCGPHDSA RGGMIPHPQS RGPFPTCQLK SELDMLVGKC REEPLEGDMS ENSBTAP00000008704/1-1105 VQPCGPHDPT QSGMMPHPQS RGPLPTCQLK SELGVLVNKC PEEPLEGDMS ENSTTRP00000012416/1-1106 VQPCGPHEPT QGGMMPHPQS RGPLSTCQLK SELDALLSKR PEEPLEGDMC BACU008154/1-1077 VQPCGPHDPT QGGMMPHPQS RGPLSTCQLK SELDALLSKC PEEPLEGDMC bmy_03884T0/1-1071 VQPCGPHDPT QGGMMPHPQS RGPLSTCQLK SELDALLSKC PEEPLEGDMC 201 250 ENSP00000228682/1-1106 SPNSTGIQDP LLGMLDGRED LEREEKREPE SVYETDCRWD GCSQEFDSQE ENSBTAP00000008704/1-1105 SPNSSSTQDP LLGMLDGRED LEREEKPEPD SVYETDCRWD GCSQEFDSQE ENSTTRP00000012416/1-1106 SPNSTGTQDP LLGMLDGRED LEREEKPEHD SVYETDCRWD GCSQEFDSQE BACU008154/1-1077 SPNSTGTQDP LLGMLDGRED LEREEKPEHD SVYETDCRWD GCSQEFDSQE bmy_03884T0/1-1071 SPNSTGTQDP LLGMLDGRED LEREEKPEHD SVYETDCRWD GCSQEFDSQE 251 300 ENSP00000228682/1-1106 QLVHHINSEH IHGERKEFVC HWGGCSRELR PFKAQYMLVV HMRRHTGEKP ENSBTAP00000008704/1-1105 QLVHHINSEH IHGERKEFVC HWGGCSRELR PFKAQYMLVV HMRRHTGEKP ENSTTRP00000012416/1-1106 QLVHHINSEH IHGERKEFVC HWGGCSRELR PFKAQYMLVV HMRRHTGEKP BACU008154/1-1077 QLVHHINSEH IHGERKEFVC HWGGCSRELR PFKAQYMLVV HMRRHTGEKP bmy_03884T0/1-1071 QLVHHINSEH IHGERKEFVC HWGGCSRELR PFKAQYMLVV HMRRHTGEKP 301 350 ENSP00000228682/1-1106 HKCTFEGCRK SYSRLENLKT HLRSHTGEKP YMCEHEGCSK AFSNASDRAK ENSBTAP00000008704/1-1105 HKCTFEGCRK SYSRLENLKT HLRSHTGEKP YMCEHEGCSK AFSNASDRAK ENSTTRP00000012416/1-1106 HKCTFEGCRK SYSRLENLKT HLRSHTGEKP YMCEHEGCSK AFSNASDRAK BACU008154/1-1077 HKCTFEGCRK SYSRLENLKT HLRSHTGEKP YMCEHEGCSK AFSNASDRAK bmy_03884T0/1-1071 HKCTFEGCRK SYSRLENLKT HLRSHTGEKP YMCEHEGCSK AFSNASDRAK 351 400 ENSP00000228682/1-1106 HQNRTHSNEK PYVCKLPGCT KRYTDPSSLR KHVKTVHGPD AHVTKRHRGD ENSBTAP00000008704/1-1105 HQNRTHSNEK PYVCKLPGCT KRYTDPSSLR KHVKTVHGPD AHVTKRHRGD ENSTTRP00000012416/1-1106 HQNRTHSNEK PYVCKLPGCT KRYTDPSSLR KHVKTVHGPD AHVTKRHRGD BACU008154/1-1077 HQNRTHSNEK PYVCKLPGCT KRYTDPSSLR KHVKTVHGPD AHVTKRHRGD bmy_03884T0/1-1071 HQNRTHSNEK PYVCKLPGCT KRYTDPSSLR KHVKTVHGPD AHVTKRHRGD 401 450 ENSP00000228682/1-1106 GPLPRAPSIS TVEPKREREG GPIREESRLT VPEGAMKPQP SPGAQSSCSS ENSBTAP00000008704/1-1105 GPLPRAPALS SVEPKRERDG GPIREESRLT VPEGAMKPQP SPGAQSSCSS ENSTTRP00000012416/1-1106 GPLPRAPALS TVEPKRERDG GPIREESRLA VPEGAMKPQP SPGAQSSCSS BACU008154/1-1077 GPLPRAPALS TVEPKRERDG GPIREESRLT VPEGAMKPQP SPGAQSSCSS bmy_03884T0/1-1071 GPLPRAPALS TVEPKRERDG GPIREESRLT VPEGAMKPQP SPGAQSSCSS 451 500 ENSP00000228682/1-1106 DHSPAGSAAN TDSGVEMTGN AGGSTEDLSS LDEGPCIAGT GLSTLRRLEN ENSBTAP00000008704/1-1105 DHSPAGSAAN TDSGVEMTGN AGGSTEDLSS LDEGPCLAGT GLSTLRRLEN ENSTTRP00000012416/1-1106 DHSPAGSAAN TDSGVEMTGN AGGSTEDLSS LDEGPCIAGT GLSTLRRLEN BACU008154/1-1077 DHSPAGSAAN TDSGVEMTGN AGGSTEDLSS LDEGPCIAGT GLSTLRRLEN bmy_03884T0/1-1071 DHSPAGSAAN TDSGVEMTGN AGGSTEDLSS LDEGPCIAG- ---------- 501 550 ENSP00000228682/1-1106 LRLDQLHQLR PIGTRGLKLP SLSHTGTTVS RRVGPPVSLE RRSSSSSSIS ENSBTAP00000008704/1-1105 LRLDQLHQFR PMGPRGLKLP SLTHTGTPGS RRLGAPVSLD RRSSSSSSVS ENSTTRP00000012416/1-1106 LRLDQLHQFR PIGPRGLKLP SLTHTGTPGS RRLGPPVSLD RRSSSSSSVS BACU008154/1-1077 LRLDQLHQFR PIGPRGLKLP SLTHTGTPGS RRLGPPVSLD RRSSSSSSVS bmy_03884T0/1-1071 ---------- ---------- ----TGTPGS RRLGPPVSLD RRSSSSSSVS 551 600 ENSP00000228682/1-1106 SAYTVSRRSS LASPFPPGSP PENGASSLPG LMPAQHYLLR ARYASARGGG ENSBTAP00000008704/1-1105 SAYTVSRRSS LASPFPPGSP PENGASSLPG LTPAQHYLLR ARYASARGGG ENSTTRP00000012416/1-1106 SAYTVSRRSS LASPFPPGSP PENGASSLPG LTPAQHYLLR ARYASARGGG BACU008154/1-1077 SAYTVSRRSS LASPFPPGSP PENGACSLPG LTPAQHYLLR ARYASARGGG bmy_03884T0/1-1071 SAYTVSRRSS LASPFPPGSP PENGACSLPG LTPAQHYLLR ARYASARGGG 601 650 ENSP00000228682/1-1106 TSPTAASSLD RIGGLPMPPW RSRAEYPGYN PNAGVTRRAS DPAQAADRPA ENSBTAP00000008704/1-1105 TPPTAAPSLD RTGALPAPPW RSRAEYPGYN PNVGVTRRAS DPARSVDRPA ENSTTRP00000012416/1-1106 TPPTAAPSLD RMGGLPAPPW RSRAEYPGYS PNVGVTRRAS DPARAADRPA BACU008154/1-1077 TPPTAAPSLD RMGGLPAPPW RSRAEYPGYN PNVGVTRRAS DPARSADRPA bmy_03884T0/1-1071 TPPTAAPSLD RMGGLPAPPW RSRAEYPGYN PNVGVTRRAS DPARSADRPA 651 700 ENSP00000228682/1-1106 PARVQRFKSL GCVHTPPTVA GGGQNFDPYL PTSVYSPQPP SITENAAMDA ENSBTAP00000008704/1-1105 PARVQRFKSL GCVHNTPTVV GGGQNFDPQL PTSVYSPQPP SITENVSMDT ENSTTRP00000012416/1-1106 PARVQRFKSL GCVHTPPTVA GGGRNFDPQL PTSVYTPQPP SITENVTMDT BACU008154/1-1077 PARVQRFKSL GCVHTPPTVA GGGRNFDPQL PTSVYSPQPP SITENVTMDT bmy_03884T0/1-1071 PARVQRFKSL GCVHTPPTVA GGGRNFDPQL PTSVYSPQPP SITENVAMDT 701 750 ENSP00000228682/1-1106 RGLQEEPEVG TSMVGSGLNP YMDFPPTDTL GYGGPEGAAA EPYGARGPGS ENSBTAP00000008704/1-1105 RGLREEPEVG TSMMGSGLNP YMDFPPADTL GYGGPEAAAA EPYGARGPGS ENSTTRP00000012416/1-1106 RGLREEPEVG TSMMGSGLNP YMDFPPADTL GYGGPEGAAA EPYGARGPGS BACU008154/1-1077 RGLREEPEVG TSVMGSGLNP YMDFPPADTL GYGGPEGAAA EPYGTRGPGS bmy_03884T0/1-1071 KGLREEPEVG TSMMGSGLNP YMDFPPADTL GYGGPEGAAA EPYGARGPGS 751 800 ENSP00000228682/1-1106 LPLGPGPPTN YGPNPCPQQA SYPDPTQETW GEFPSHSGLY PGPKALGGTY ENSBTAP00000008704/1-1105 LPLGPGPPTN YGPNPCPQQV PYSEPTPETW SEFPSHSGLY SGPKAPAGAY ENSTTRP00000012416/1-1106 LPLGPGPPTN YGPNPCPQQV SYPEPTPETW GEFPSHSGLY PGPKPPAAAY BACU008154/1-1077 LPLGPGPPTN YGPNPCPQQV SYPEPTPETW GEFPSHSGLY PGPKPPAGAY bmy_03884T0/1-1071 LPLGPGPSTN YGPNPCPQQV SYPEPTPETW GEFPSHSGLY PGPKPPAGAY 801 850 ENSP00000228682/1-1106 SQCPRLEHYG QVQVKPEQGC PVGSDSTGLA PCLNAHPSEG PPHPQPLFSH ENSBTAP00000008704/1-1105 SQCPRLEHYG QVQVKPEQGC PVGSDATGLA PCLNAHPNEG PPRSQPLFSH ENSTTRP00000012416/1-1106 GQCPRLEHYG QVQVKPEQGC PVGSDSTGLA PCLNAHPSEG PPRSQPLFSH BACU008154/1-1077 GQCPRLEHYG QVQVKPEQGC PVGSDSTGLA PCLNAHPNEG PPRSQPLFSH bmy_03884T0/1-1071 GQCPRLEHYG QVQVKPEQGC PVGSDSTGLA PCLNAHPSEG PPRSQPLFSH 851 900 ENSP00000228682/1-1106 YPQPSPPQYL QSGPYTQPPP DYLPSEPRPC LDFDSPTHST GQLKAQLVCN ENSBTAP00000008704/1-1105 YPQPPPPQYP QSGSYTQPPP DYLPSEARPS LDFESPTHST GHLKAQLVCN ENSTTRP00000012416/1-1106 FPQPPPPQYP QSGTYTQPPP DYLPSEPRPS LDFECPTHST GQLKAQLVCN BACU008154/1-1077 YPQPPPPQYP QSGNYTQPPP DYLPSEPRPS LDFESPTHST GQLKAQLVCN bmy_03884T0/1-1071 YPQPPPPQYP QSGTYTQPPP DYLPSEPRPS LDFEFPTHST GQLKAQLVCN 901 950 ENSP00000228682/1-1106 YVQSQQELLW EGGGREDAPA QEPSYQSPKF LGGSQVSPSR AKAPVNTYGP ENSBTAP00000008704/1-1105 YVQSQQELLW DSGGRGDPPV QEPLYQSPKF LGGSQVSPSP AKAPVATYGP ENSTTRP00000012416/1-1106 YVQSQQELLW EGGGRGDPPV QDPLYQSPKF LGGSQVSLSP AKAQVATYGP BACU008154/1-1077 YVQSQQELLW EGGGRGDPPV QDPLYQSPKF MGGSQVSLSP AKAQVATYGP bmy_03884T0/1-1071 YVQSQQELLW EGGGRGDPPV QDPLYQSPKF LGGSQVSLSP AKAQVATYGP 951 1000 ENSP00000228682/1-1106 GFGPNLPNHK SGSYPTPSPC HENFVVGANR ASHRAAAPPR LLPPLPTCYG ENSBTAP00000008704/1-1105 GFAPNMPNHK PGSYPTPS-C HENFAVGANK ASHRAAAPPR LLPPLPACYG ENSTTRP00000012416/1-1106 GFVPNLPNHK SGSYPTLSSC HENFAVGANK ASHRAAAPPR LLPPLPTCYG BACU008154/1-1077 GFAPNLPNHK SGSYPTPSPC HENFAVGANK ASHRAAAPPR LLPPLPTCYG bmy_03884T0/1-1071 GFAPNLPNHK SGSYPTPSPC HENFAVGANK ASHRAAAPPR LLPPLPTCYG 1001 1050 ENSP00000228682/1-1106 PLKVGGTNPS CGHPEVGRLG GGPALYPPPE GQVCNPLDSL DLDNTQLDFV ENSBTAP00000008704/1-1105 PLKAGGTNPS CGHPEVGRLG GGPALYPPPE GQVCNPLDSL DLDNTQLDFV ENSTTRP00000012416/1-1106 PLKAGGTNPS CGHPEVGRLG GGPALYPPPE GQVCNPLDSL DLDNTQLDFV BACU008154/1-1077 PLKAGGTNPS CGHPEVGRLG GGPALYPPPE GQVCNPLDSL DLDNTQLDFV bmy_03884T0/1-1071 PLKAGGTNPS CGHPEVGRLG GGPALYPPPE GQVCNPLDSL DLDNTQLDFV 1051 1100 ENSP00000228682/1-1106 AILDEPQGLS PPPSHDQRGS SGHTPPPSGP PNMAVGNMSV LLRSLPGETE ENSBTAP00000008704/1-1105 AILDEAQGLS PPPSHNQRDS SEHTPPPSGT PNMAVGNMSV LLGSLPGETQ ENSTTRP00000012416/1-1106 AILDEPQGLS PPPSHDQRDS SEHTPPPSGT PNMAVGNMSV LLGSLPGETQ BACU008154/1-1077 AILDEPQGLS PPPSHDQRDR SEHTPPPSGT PNMAVGNMSV LLGSLPGETQ bmy_03884T0/1-1071 AILDEPQGLS PPPSHDQRDS SEHIPPPSGT PNMAVGNMSV LLGSLPGETQ 1101 1150 ENSP00000228682/1-1106 FLNSSA ENSBTAP00000008704/1-1105 FLNSSA ENSTTRP00000012416/1-1106 FLNSSA BACU008154/1-1077 FLNSSA bmy_03884T0/1-1071 FLNSSA