KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:36:05 2014 Check: 00 .. Name: ENSP00000367319/1-452 Len: 452 Check: 3628 Weight: 1.00 Name: ENSBTAP00000008714/1-401 Len: 452 Check: 5233 Weight: 1.00 Name: ENSTTRP00000006321/1-451 Len: 452 Check: 7006 Weight: 1.00 Name: bmy_12724T0/1-415 Len: 452 Check: 6513 Weight: 1.00 Name: BACU007000/1-353 Len: 452 Check: 141 Weight: 1.00 // 1 50 ENSP00000367319/1-452 MASRINTNFT LIPNQKLRRS NRQTSCYSKT LGSGFQPIST FGNFKALPLE ENSBTAP00000008714/1-401 MTSRVNTSFT LIPNQKYRRS SRRSSCFSNT FDSDSQPLST LGNFKALPLE ENSTTRP00000006321/1-451 MASRVNTSFT LIPNQKYRRR NHRSNRFSNI LDPDSQPLST LGNFKALPLE bmy_12724T0/1-415 MASRVNTSFT LIPNQKYRRS NHRSSRFSNI LDPDSQPLST LGSFKALPLE BACU007000/1-353 MASRVNTSFT LIPNQKYRRS NHRSSHFPNI LDPDSQPLST LGNFKALPLE 51 100 ENSP00000367319/1-452 IFQIILKYLS VKDISMLSMV SKTVSQHIIN YISTSSGSKR LLLQDFHNLE ENSBTAP00000008714/1-401 IFQIILKYLS VKDISMLSMV SKTVSQHIIN YISTSSGSKR LLLQDFHDLE ENSTTRP00000006321/1-451 IFQIILRCLS VKDISVLSMV SKTVSQHIIS YISTSSGSKR LLLQDFHNLE bmy_12724T0/1-415 IFQIILRCLS VKDISMLSMV SKTVSQHIIN YISTSSGSKR LLLQDFHNLE BACU007000/1-353 IFQIILRCLS ---------- ---------- ---------- ---------- 101 150 ENSP00000367319/1-452 LPDRRQDSAI LEHYRSLGLL FKRCTLLLPT KERLKYIHKI LTEVSCFKFN ENSBTAP00000008714/1-401 LPD-REDTAI VEHYRSLGLL FKRCTLLLPT KERLKYIHKI LADVSCFKFN ENSTTRP00000006321/1-451 LPDRRQNSTI LEHYRSLGLL FKRCTLLLPT KERLKYIHKI LAEVSCFKFN bmy_12724T0/1-415 LPDRRQDSTI LEHYRSLGLL FKRCTLLLPT KERLKYIHKI LAEVSCFKFN BACU007000/1-353 ---------- -------GLL FKRCTLLLPT KERLKYIHKI LAE------- 151 200 ENSP00000367319/1-452 GCAAPMQCLG LTCYGMFLQT LTAGWDELEC HRVYNFLCEL TNLCRKIQMA ENSBTAP00000008714/1-401 GCAAPLQCVG LLCYGIFLQT LTAGWDELEC HRVYNFLCEL THLSRKMQTV ENSTTRP00000006321/1-451 GCVTPLQCLG LPCYGMFLQT LTAGWDELEC HRVYNFLCEL TNLSRNMQTV bmy_12724T0/1-415 GCVAPLQCLG LPCYGMFLQT LTAGWDELEC HRVYNFLCEL TNLSRKMQTV BACU007000/1-353 ---------- ---------T LTAGWDELEC HRVYNFLCEL TNLSRKMQTV 201 250 ENSP00000367319/1-452 VCSKPGSAQK LELRIRLFCR NVLLDHWTHR SDSAFWLTRI LKPWPMVNQA ENSBTAP00000008714/1-401 VCSKPGSARK LELRIRLFCR NVLLDHWTHR SDSAFWLTCI LKPWPMVNQA ENSTTRP00000006321/1-451 VCSKPGIATK LELWIRLFCR NVFLDPWTRR SDSAFWLTCI LKPWPMVNQA bmy_12724T0/1-415 VCSKPGNARK LELRIRLFCR NVLLDHWTHR SDSAFWLTCI LKPWPMVNQA BACU007000/1-353 VCSKPGNARK LELRIRLFCR NVLLDHWTHR SDSAFWLTCI LKPWPMVNQA 251 300 ENSP00000367319/1-452 RLLYIIFGPI SPQDGQVVWQ EMIEEPTDEF SLKGLADAIK LLYDASTKEW ENSBTAP00000008714/1-401 RLLYIIFGPI SPQD------ ---------- ---------- ---------- ENSTTRP00000006321/1-451 RLLYIXXXXX XXXXXQVVWQ KMIEGPADEP SLKGLADAIK LLYDTGTKEW bmy_12724T0/1-415 RLLYIIFGPV APQDGQVVWQ KMIEGPADEP SLKGLADAIK LLYDTGTKEW BACU007000/1-353 RLLYIIFGPV APQDGQVVWQ KMIEEPADEP SLKGLADAIK LLYDTGTKGW 301 350 ENSP00000367319/1-452 TADDVISLVD ELSVVPREWL LENNARLLML SGNNICFSFM ASKAVNGRTI ENSBTAP00000008714/1-401 ---------- ---VVPREWL LENNARLLIL SGNNICFTFM ASKAVNGRTI ENSTTRP00000006321/1-451 TADDVISLVD ELSVVPREWL LENNAHLLIL SGNSVCFTFM ASKAMNGRAI bmy_12724T0/1-415 TADDVISLVD ELSVVPREWL LENNAHLLIL SGNSICFTFM ASKAVNGRAI BACU007000/1-353 TADDVISLVD ELSVVPREWL LENNAHLLIL SGNSICFTFM ASKAVNGRAI 351 400 ENSP00000367319/1-452 ELARLVVFLA LVCEKELYCM DWTVKMMQKV CKVFSTPVER KNFLQNVANA ENSBTAP00000008714/1-401 ELAKLIVFLA LVSEKELYCM DWAVKMMQKV CKVFSTPVER NNFLQSVADA ENSTTRP00000006321/1-451 ELARLIVFLA LVCEKELYCM DWAVKMMQKV CKVFSTPVER NNFLQSVANA bmy_12724T0/1-415 ELARLIVFLA LVCEKELYCM DWAVKMTRKV CKVFSTPVER NNFLQSVANA BACU007000/1-353 ELAKLIVFLA LVCEKELYCM DWAVKMTRKV CKVFSTPVER NNFLQSVANA 401 450 ENSP00000367319/1-452 FACVIMEMLQ SIMSGDRDED DRSFLNLFHL VHAQANFHKE VLYLTMNTPL ENSBTAP00000008714/1-401 FACAIMEMLQ LVMSGDGDDD DRSFMNLFHL VQAQASFHKE VLYLTMNV-L ENSTTRP00000006321/1-451 FAYVIMEMLQ SVLSEDHDED NRSFLNLFHL VHAQANFHKE VLCLTMNT-L bmy_12724T0/1-415 FAYVIMEMLQ SVMSD----- ---------- ---------- ---------- BACU007000/1-353 FAYVIMEMLQ SVMSER---- ----IAVLHP ERALKNSVRP ILLQ------ 451 500 ENSP00000367319/1-452 ST ENSBTAP00000008714/1-401 PS ENSTTRP00000006321/1-451 ST bmy_12724T0/1-415 -- BACU007000/1-353 --