KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:36:06 2014 Check: 00 .. Name: ENSP00000284437/1-314 Len: 507 Check: 6971 Weight: 1.00 Name: ENSBTAP00000008725/1-321 Len: 507 Check: 2791 Weight: 1.00 Name: ENSTTRP00000015750/1-321 Len: 507 Check: 9647 Weight: 1.00 Name: bmy_17429T0/1-507 Len: 507 Check: 9778 Weight: 1.00 Name: BACU007651/1-321 Len: 507 Check: 8414 Weight: 1.00 // 1 50 ENSP00000284437/1-314 MG-------- ---------- ---------- ---------- ---------- ENSBTAP00000008725/1-321 MG-------- ---------- ---------- ---------- ---------- ENSTTRP00000015750/1-321 MG-------- ---------- ---------- ---------- ---------- bmy_17429T0/1-507 MGLVVGKAKQ EQPSPTAPAQ SRPRAPACCF RSPRKRPKLG RGAAGPPAGG BACU007651/1-321 MG-------- ---------- ---------- ---------- ---------- 51 100 ENSP00000284437/1-314 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008725/1-321 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015750/1-321 ---------- ---------- ---------- ---------- ---------- bmy_17429T0/1-507 AGRGAGAAGR EGAGGRGPHV EGAAPRVILS SSQSPRALPG SPGSQFQNGF BACU007651/1-321 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000284437/1-314 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008725/1-321 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015750/1-321 ---------- ---------- ---------- ---------- ---------- bmy_17429T0/1-507 GYCLSSVYLH YLAVRPFLPK QKQQKVNLIN LKIQKENPKV VNEINIEDLC BACU007651/1-321 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000284437/1-314 ------CRC- -------CK- ---------- -----II--- -----QSYLF ENSBTAP00000008725/1-321 ------CRC- -------CK- ---------- -----MI--- -----QSYLF ENSTTRP00000015750/1-321 ------CRC- -------CK- ---------- -----ML--- -----QSYLL bmy_17429T0/1-507 LTKAANCRCW HSKTFPACDG SHDKHNELTG DDVGPLILKK YNNDNKNYLF BACU007651/1-321 ------CRC- -------CK- ---------- -----ML--- -----QSYLF 201 250 ENSP00000284437/1-314 DPVQVPSPGY VNEVNSCKLD EDDTDKLKGK WSSEVLVQKN DPQRQGSKKT ENSBTAP00000008725/1-321 DPVHVPSPGY VNEVNSCKLD EEDTLKLKDK QSSEILVHKG DPPNEGSKRT ENSTTRP00000015750/1-321 DPVQVPSPGY VNEVNSCKLD EDDAVKLKGK QSREVLVHKD DPPSESSKRT bmy_17429T0/1-507 DPVQVPSPGY VNEVNSCKLD EDDAVKLKGK QSREVLVHKD DPPSESSKRT BACU007651/1-321 DPVQVPSPGY VNEVNSCKLD EDDAVKVKGK QSREVLVHKD DPPSESSKRT 251 300 ENSP00000284437/1-314 ESSSRTADPW EPCWPHQGPL PQGDAGG--- -EHHACGVNG IGPAATPQPT ENSBTAP00000008725/1-321 ASGSGTAAPQ EPYGPPRGPL LSEDTVGGPC AEKTSGAING LGPAAVLQLI ENSTTRP00000015750/1-321 TSRYQTAALQ EPCGPPQGPL LPGDMAGGPC AEKTGGAVNG LGPAAALQLA bmy_17429T0/1-507 ASRGQTAAPQ EPCGPPQGPL LPGDTAGGPC AEKTGGAVNG LGPAAALQLA BACU007651/1-321 ASRGQTAAPQ EPCGPPQGPL LPGDTAGGPC AEKTGGALNG LGPAAALQLA 301 350 ENSP00000284437/1-314 GNSSPTQDDR GSWASTANTV PPTQPFLEGG GTRKQDCVLL ASEGTQVMRN ENSBTAP00000008725/1-321 GEPGPPQGAR DSWASAANKG HPTQPFLEGG SARELDCMQL GSGETQVIRN ENSTTRP00000015750/1-321 GDPGCPQGDR GSWASATNKG HTTRPFLGGG SARQPDCVLL ASGETRVIGN bmy_17429T0/1-507 GDPGCPQGDR GSWASAANKG HTTRPFLEGG SAREPDCVLL ASGETRVIGN BACU007651/1-321 GDPGCPQGDR GSWASATNKG HTTRPFLEGG SAREPDCVLL ASGETRVIGS 351 400 ENSP00000284437/1-314 GDSRAPSEAE SFALEVQDHV FQIPAPDYLQ HWGPAGDN-- -VDHNEKDCV ENSBTAP00000008725/1-321 GGSGTPSTAG LAAWEVPAQV LQIPTPDYPP FSSSAEDNTD HVDHQEKDRL ENSTTRP00000015750/1-321 GDSSASCAAG HPAWEIPDHV LQIPAPDYPQ LWGSADDDAD HVDREEKDCL bmy_17429T0/1-507 GDSSASCAAG HPAWEVPDHV LQIPAPDYPQ LWGSADDDAD HVDREEKDCL BACU007651/1-321 GDSSASCAAG HPTWEVPDHV LQIPAPDYPR LWGPADDDAD HVDGEEKDCL 401 450 ENSP00000284437/1-314 FKNHTEDESL EGIQPPVGEH GLNTPFSVRR SWDSLNEDVE TEVLSICFNE ENSBTAP00000008725/1-321 FKIHSEKEPQ EGAHPPAGEC GLNMPFSIKR SWDSLNEAVT TEIPSVYFDK ENSTTRP00000015750/1-321 FKSHTEEEPG QGAPSGAGER GLNMPFSVKR SWDSLNEAVA TEVLSVYFKE bmy_17429T0/1-507 FKSHTEEETR EGAHPRAGER GLNMPFSVKR SWDSLNEAVA TEVLSVYFKE BACU007651/1-321 FKSHTEEEPR EGAHPRAGER GLNMPFSVKR SWDSLNEAVA TEVLSVYFKE 451 500 ENSP00000284437/1-314 KGPVHAMPVV DSGNRQEDTH GSDGDGDGEI VDEDAAVAEA LAALEAATAG ENSBTAP00000008725/1-321 DDPAQDVPVV DSRNGWEEAP GSPGDGSWET ADEDAEVAEA LAALEAATAG ENSTTRP00000015750/1-321 EDPAQDVPVV DSRNGWEETQ GSLGDVSGET ADEDAEVAEA LAALEAATAG bmy_17429T0/1-507 EDPAQDVPVV DSRNGWEETQ GSPGDASGET ADEDAEVAEA LAALEAATAG BACU007651/1-321 EDPAQDVPVV DSRNGWEETQ GSPGDASGET ADEDAEVAEA LAALEAATAG 501 550 ENSP00000284437/1-314 EDLDETD ENSBTAP00000008725/1-321 EDVDEAE ENSTTRP00000015750/1-321 EDVDEAE bmy_17429T0/1-507 EDVDEAE BACU007651/1-321 EDVDEAE