KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:36:07 2014 Check: 00 .. Name: BACU009388/1-516 Len: 530 Check: 5664 Weight: 1.00 Name: ENSTTRP00000013926/1-351 Len: 530 Check: 5880 Weight: 1.00 Name: ENSP00000309591/1-351 Len: 530 Check: 6114 Weight: 1.00 Name: bmy_04832T0/1-292 Len: 530 Check: 1228 Weight: 1.00 Name: ENSBTAP00000008727/1-351 Len: 530 Check: 5963 Weight: 1.00 // 1 50 BACU009388/1-516 ---------- ----MVKEFL AKAKEDFLKK WENPAQNTAH LDQFERIKTL ENSTTRP00000013926/1-351 MGNAAAPKKG SEQESVKEFL AKAKEDFLKK WENPAQNTAH LDQFERIKTL ENSP00000309591/1-351 MGNAAAAKKG SEQESVKEFL AKAKEDFLKK WESPAQNTAH LDQFERIKTL bmy_04832T0/1-292 ---------- ------KEFL AKAKEDFLKK WENPAQ---- ---------- ENSBTAP00000008727/1-351 MGNAAAAKKG SEQESVKEFL AKAKEDFLKK WENPAQNTAH LDQFERIKTL 51 100 BACU009388/1-516 GTGSFGRVML VKHKESGNHF AMKILDKQKV VKLKQIEHTL NEKRILQAVN ENSTTRP00000013926/1-351 GTGSFGRVML VKHKETGNHF AMKILDKQKV VKLKQIEHTL NEKRILQAVN ENSP00000309591/1-351 GTGSFGRVML VKHKETGNHY AMKILDKQKV VKLKQIEHTL NEKRILQAVN bmy_04832T0/1-292 ---------- ---------- ---------V VKLKQIEHTL NEKRILQAVN ENSBTAP00000008727/1-351 GTGSFGRVML VKHMETGNHY AMKILDKQKV VKLKQIEHTL NEKRILQAVN 101 150 BACU009388/1-516 FPFLVKLEFS FKDNSNLYMI MEYVPGGEMF SHLRRIGRFS EPHARFYAAQ ENSTTRP00000013926/1-351 FPFLVKLEFS FKDNSNLYMI MEYVPGGEMF SHLRRIGRFS EPHARFYAAQ ENSP00000309591/1-351 FPFLVKLEFS FKDNSNLYMV MEYVPGGEMF SHLRRIGRFS EPHARFYAAQ bmy_04832T0/1-292 FPFLVKLEFS FKDNSNLYMI MEYVPGGEMF SHLRRIGRFS EPHARFYAAQ ENSBTAP00000008727/1-351 FPFLVKLEFS FKDNSNLYMV MEYVPGGEMF SHLRRIGRFS EPHARFYAAQ 151 200 BACU009388/1-516 IVLTFEYLHS LDLIYRDLKP ENLLIDQQGY IQVTDFGFAK RVKGRTWTLC ENSTTRP00000013926/1-351 IVLTFEYLHS LDLIYRDLKP ENLLIDQQGY IQVTDFGFAK RVKGRTWTLC ENSP00000309591/1-351 IVLTFEYLHS LDLIYRDLKP ENLLIDQQGY IQVTDFGFAK RVKGRTWTLC bmy_04832T0/1-292 IVLTFEYLHS LDLIYRDLKP ENLLIDQQGY IQVTDFGFAK RVKGRTWTLC ENSBTAP00000008727/1-351 IVLTFEYLHS LDLIYRDLKP ENLLIDQQGY IQVTDFGFAK RVKGRTWTLC 201 250 BACU009388/1-516 GTPEYLAPEI ILSKGYNKAV DWWALGVLIY EMAAGYPPFF ADQPIQIYEK ENSTTRP00000013926/1-351 GTPEYLAPEI ILSKGYNKAV DWWALGVLIY EMAAGYPPFF ADQPIKIYDK ENSP00000309591/1-351 GTPEYLAPEI ILSKGYNKAV DWWALGVLIY EMAAGYPPFF ADQPIQIYEK bmy_04832T0/1-292 GTPEYLAPEI ILSKGYNKAV DWWALGVLIY EMAAGYPPFF ADQPIQIYEK ENSBTAP00000008727/1-351 GTPEYLAPEI ILSKGYNKAV DWWALGVLIY EMAAGYPPFF ADQPIQIYEK 251 300 BACU009388/1-516 IVSGKVRFPS HFSSDLKDLL RNLLQVDLTK RFGNLKNGVN DIKNHKWFAT ENSTTRP00000013926/1-351 IVSGKVRFPS HFSSDLKDLL RNLLQVDLTK RFGNLKNGVN DIKNHKWFAT ENSP00000309591/1-351 IVSGKVRFPS HFSSDLKDLL RNLLQVDLTK RFGNLKNGVN DIKNHKWFAT bmy_04832T0/1-292 IVSGKVRFPS HFSSDLKDLL RNLLQVDLTK RFGNLKNGVN DIKNHKWFAT ENSBTAP00000008727/1-351 IVSGKVRFPS HFSSDLKDLL RNLLQVDLTK RFGNLKNGVN DIKNHKWFAT 301 350 BACU009388/1-516 TDWIAIYQRK RGGEERVLEK EEEDEDDEDE DDEDEVSEGS EVPEGDRPAG ENSTTRP00000013926/1-351 TDWIAIYQRK VEA------- ---------- ---------- ---------- ENSP00000309591/1-351 TDWIAIYQRK VEA------- ---------- ---------- ---------- bmy_04832T0/1-292 TDWIAIYQRK VEA------- ---------- ---------- ---------- ENSBTAP00000008727/1-351 TDWIAIYQRK VEA------- ---------- ---------- ---------- 351 400 BACU009388/1-516 AQHQQLNGER GPQSAKERVK EWTPCGPHQG QDEGRGPAPG SGTRQVFSMA ENSTTRP00000013926/1-351 ---------- ---------- ---------- ---------- ---------- ENSP00000309591/1-351 ---------- ---------- ---------- ---------- ---------- bmy_04832T0/1-292 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008727/1-351 ---------- ---------- ---------- ---------- ---------- 401 450 BACU009388/1-516 AMNKEGGSAS AATGPDSPSP VPLPPGKPAL PGADGTPFGC PSGRKEKPAD ENSTTRP00000013926/1-351 ---------- ---------- -------PFI PKFKG----- ---------- ENSP00000309591/1-351 ---------- ---------- -------PFI PKFKG----- ---------- bmy_04832T0/1-292 ---------- ---------- -------PFI PKFKG----- ---------- ENSBTAP00000008727/1-351 ---------- ---------- -------PFI PKFKG----- ---------- 451 500 BACU009388/1-516 PVEWTVTDVV EYFTEAGFPE QATAFQEQEI DGKSLLLMQR TDVLTGLSIR ENSTTRP00000013926/1-351 ---------- --------PG DTSNFDDYEE E--------- -EIRVSISEK ENSP00000309591/1-351 ---------- --------PG DTSNFDDYEE E--------- -EIRVSINEK bmy_04832T0/1-292 ---------- --------PG DTSNFDDYEE E--------- -EIRVSINEK ENSBTAP00000008727/1-351 ---------- --------PG DTSNFDDYEE E--------- -EIRVSINEK 501 550 BACU009388/1-516 LGPALKIYEH HIKVLQQGHF EDDDPDGFLG ENSTTRP00000013926/1-351 CGKEFSEF-- ---------- ---------- ENSP00000309591/1-351 CGKEFSEF-- ---------- ---------- bmy_04832T0/1-292 CGKEFSEF-- ---------- ---------- ENSBTAP00000008727/1-351 CGKEFSEF-- ---------- ----------