KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:36:11 2014 Check: 00 .. Name: ENSTTRP00000010237/1-971 Len: 972 Check: 6866 Weight: 1.00 Name: ENSP00000261745/1-972 Len: 972 Check: 4924 Weight: 1.00 Name: BACU003449/1-761 Len: 972 Check: 142 Weight: 1.00 Name: ENSBTAP00000008756/1-953 Len: 972 Check: 5860 Weight: 1.00 Name: bmy_05725T0/1-966 Len: 972 Check: 3929 Weight: 1.00 // 1 50 ENSTTRP00000010237/1-971 MATRGHVQDP NDRRLRPIYD YLDNGNNKMA IQQADKLLKK HKDLHCAKVL ENSP00000261745/1-972 MATRGHVQDP NDRRLRPIYD YLDNGNNKMA IQQADKLLKK HKDLHCAKVL BACU003449/1-761 ---------- ---------- --------MA IQQADKLLKK HKDLHCAKVL ENSBTAP00000008756/1-953 ---------- ---------D YLDNGNNKMA IQQADKLLKK HKDLHCAKVL bmy_05725T0/1-966 ------MVHL VDLKLDYNKD YLDNGNNKMA IQQADKLLKK HKDLHCAKVL 51 100 ENSTTRP00000010237/1-971 KAIGLQRTGK QEEAFTLAQE VAALEPTDDN SLQALTILYR EMHRPELVTK ENSP00000261745/1-972 KAIGLQRTGK QEEAFTLAQE VAALEPTDDN SLQALTILYR EMHRPELVTK BACU003449/1-761 KAIGLQRTGK QEEAFILAQE VAALEPTDDN SLQALTILYR EMHRPELVTK ENSBTAP00000008756/1-953 KAIGLQRTGK QEEAFILAQE VAALEPTDDN SLQALTILYR EMHRPELVTK bmy_05725T0/1-966 KAIGLQRTGK QEEAFILAQE VAALEPTDDN SLQALTILYR EMHRPELVTK 101 150 ENSTTRP00000010237/1-971 LYEAAVKKVP NSEEYHSHLF MAYARVGEYK KMQQAGMALY KIVPKNPYYF ENSP00000261745/1-972 LYEAAVKKVP NSEEYHSHLF MAYARVGEYK KMQQAGMALY KIVPKNPYYF BACU003449/1-761 LYEAAVKKVP NSEEYHSHLF MAYARVGEYK KMQQAGMALY KIVPKNPYYF ENSBTAP00000008756/1-953 LYEAAVKKVP NSEEYHSHLF MAYARVGEYK KMQQAGMALY KIVPKNPYYF bmy_05725T0/1-966 LYEAAVKKVP NSEEYHSHLF MAYARVGEYK KMQQAGMALY KIVPKNPYYF 151 200 ENSTTRP00000010237/1-971 WSVMSLIMQS ISAQDENLSK TMFLPLAERM VEKMVKEDKI EAEAEVELYY ENSP00000261745/1-972 WSVMSLIMQS ISAQDENLSK TMFLPLAERM VEKMVKEDKI EAEAEVELYY BACU003449/1-761 WSVMSLIMQS ISAQDENLSK TMFLPLAERM VEKMVKEDKI EAEAEVELYY ENSBTAP00000008756/1-953 WSVMSLIMQS ISAQDENLSK TMFLPLAERM VEKMVKEDKI EAEAEVELYY bmy_05725T0/1-966 WSVMSLIMQS ISAQDENLSK TMFLPLAERM VEKMVKEDKI EAEAEVELYY 201 250 ENSTTRP00000010237/1-971 MILERLGKYQ EALDVIRGKL -EKLTSEIQS RENKCMAMYK KLSRWPECNA ENSP00000261745/1-972 MILERLGKYQ EALDVIRGKL GEKLTSEIQS RENKCMAMYK KLSRWPECNA BACU003449/1-761 MILERLGKYQ EALDVIRGKL GEKLTSEIQS RENKCMAMYK KLSRWPECNA ENSBTAP00000008756/1-953 MILERLGKYQ EALDVIRGKL GEKLTSEIQS RENKCMAMYK KLSRWPECNA bmy_05725T0/1-966 MILERLGKYQ EALDVIRGKL GEKLTSEIQS RENKCMAMYK KLSRWPECNA 251 300 ENSTTRP00000010237/1-971 LSRRLLLKNS DDWQFYLTYF DSVFRLIEEA WTPPAEGEHS LEGEVHYSAE ENSP00000261745/1-972 LSRRLLLKNS DDWQFYLTYF DSVFRLIEEA WSPPAEGEHS LEGEVHYSAE BACU003449/1-761 LSRRLLLKN- ---------- ---------- ---------S LEGEVHYSAE ENSBTAP00000008756/1-953 LSRRLLLKNS DDWQFYLTYF DSVFRLIEEA WTPPAEGEHS LEGEVHYSAE bmy_05725T0/1-966 LSRRLLLKNS DDWQFYLTYF DSVFRLIEEA WTPPAEGEHS LEGEVHYSAE 301 350 ENSTTRP00000010237/1-971 EAVRFIEDRI TEESKSSRHL RGPHLAKLEL IRRLRRQGFN DEYKLGDPEE ENSP00000261745/1-972 KAVKFIEDRI TEESKSSRHL RGPHLAKLEL IRRLRSQGCN DEYKLGDPEE BACU003449/1-761 EAVRFIEDRI TEESKSSRHL RGPHLAKLEL IRRLRRQGFN DEYKL----- ENSBTAP00000008756/1-953 EAVRFIEDRI TEESKNSRHL RGPHLAKLEL IRRLRRQGFN DEYKLGDPEE bmy_05725T0/1-966 EAVRFIEDRI TEESKSSRHL RGPHLAKLEL IRRLRRQGFN DEYKLGDPEE 351 400 ENSTTRP00000010237/1-971 LMFQYFKKFG DKPCCFTDLK VFVDLLPATQ CTKFINQLLG VVPLSTPTED ENSP00000261745/1-972 LMFQYFKKFG DKPCCFTDLK VFVDLLPATQ CTKFINQLLG VVPLSTPTED BACU003449/1-761 ---------- -------DLK VFVDLLPATQ CTKFINQLLG VVPLSTPTED ENSBTAP00000008756/1-953 LMFQYFKKFG DKPCCFTDLK VFVDLLPATQ CTKFINQLLG VVPLSTPTED bmy_05725T0/1-966 LMFQYFKKFG DKPCCFTDLK VFVDLLPATQ CTKFINQLLG VVPLSTPTED 401 450 ENSTTRP00000010237/1-971 KLALPADIRA LQQHLCVVQL TRLLGLYHMM DKNQKLSVVR ELMLRYQHGL ENSP00000261745/1-972 KLALPADIRA LQQHLCVVQL TRLLGLYHTM DKNQKLSVVR ELMLRYQHGL BACU003449/1-761 KLALPADIRA LQQHLCVVQL TRLLGLYHMM DKNQKLSVVR ELML------ ENSBTAP00000008756/1-953 KLALPADIRA LQRHLCVVQL TRLLGLYHTM DKNQKLSVVR ELMLRYQHGL bmy_05725T0/1-966 KLALPADIRA LQQHLCVVQL TRLLGLYHMM DKNQKLSVVR ELMLRYQHGL 451 500 ENSTTRP00000010237/1-971 EFGKSCLKTE LQFSDYYCLL AVHVLIDIWR ETGDETAVWQ ALTLLEEGLT ENSP00000261745/1-972 EFGKTCLKTE LQFSDYYCLL AVHALIDVWR ETGDETTVWQ ALTLLEEGLT BACU003449/1-761 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008756/1-953 EFGKSCLKTE LQFSDYYCLL AVHVLIDVWR ETGDETAVWQ ALTLLEEGLT bmy_05725T0/1-966 EFGKSCLKTE LQFSDYYCLL AVHVLIDIWR ETGDETAVWQ ALTLLEEGLT 501 550 ENSTTRP00000010237/1-971 HSPSNAQFKL LLVRIYCMLG AFEPVVDLYS SLDAKHIQHD TIGYLLTRYA ENSP00000261745/1-972 HSPSNAQFKL LLVRIYCMLG AFEPVVDLYS SLDAKHIQHD TIGYLLTRYA BACU003449/1-761 ---------- ---------- ---------- ---------- --SYHLTRYA ENSBTAP00000008756/1-953 HSPSNAQFKL LLVRIYCMLG AFEPVVDLYS SLDAKHIQHD TIGYLLTRYA bmy_05725T0/1-966 HSPSNAQFKL LLVRIYCMLG AFEPVVDLYS SLDAKHIQHD TIGYHLTRYA 551 600 ENSTTRP00000010237/1-971 ESLGQYAAAS QSCNFALRFF HSNQKDTSEY IIQAYKYGAF EKIPEFIAFR ENSP00000261745/1-972 ESLGQYAAAS QSCNFALRFF HSNQKDTSEY IIQAYKYGAF EKIPEFIAFR BACU003449/1-761 ESLGQYAAAS QSCNFALRFF HSNQKDTSEY IIQAYKYGAF EKIPEFIAFR ENSBTAP00000008756/1-953 ESLGQYAAAS QSCNFALRFF HSNQKDTSEY IIQAYKYGAF EKIPEFIAFR bmy_05725T0/1-966 ESLGQYAAAS QSCNFALRFF HSNQKDTSEY IIQAYKYGAF EKIPEFIAFR 601 650 ENSTTRP00000010237/1-971 NRLNNSLHFA QVRTERMLLD LLLEANVSTS LAESIKSMNL RPEEDDIPWE ENSP00000261745/1-972 NRLNNSLHFA QVRTERMLLD LLLEANISTS LAESIKSMNL RPEEDDIPWE BACU003449/1-761 NRLNNSLHFA QVRIERMLLD LLLEANVSTS LAESIKSMNL RPEEDDIPWE ENSBTAP00000008756/1-953 NRLNNSLHFA QVRTERMLLD LLLEANISTS LAESIKSMNL RPEEDDIPWE bmy_05725T0/1-966 NRLNNSLHFA QVRTERMLLD LLLEANVSTS LAESIKSMNL RPEEDDIPWE 651 700 ENSTTRP00000010237/1-971 ALRDNRDLNV FFSWDPKDRD VSEEHKKLSL EEETMWLRIR SLTLRLISGL ENSP00000261745/1-972 DLRDNRDLNV FFSWDPKDRD VSEEHKKLSL EEETLWLRIR SLTLRLISGL BACU003449/1-761 ALRDNRDLNV FFSWDPKDRD VSEEHKKLSL EEETMWLRIR SLTLRLISGL ENSBTAP00000008756/1-953 ALRDNRDLNV FFSWDPKDRD VSEEHKKLSL EEETMWLRIR SLTLRLISGL bmy_05725T0/1-966 ALRDNRDLNV FFSWDPKDRD VSEEHKKFSL EEETMWLRIR SLTLRLISGL 701 750 ENSTTRP00000010237/1-971 PSLNHSVGPE NSEKTTENGV SSRIDIFRLL LQQLEVALET GKRFIEKDIQ ENSP00000261745/1-972 PSLNHPVEPK NSEKTAENGV SSRIDILRLL LQQLEATLET GKRFIEKDIQ BACU003449/1-761 PSLNHSVGPE NSEKTTENGV SSRIDIFRLL LQQLEVALET GKRFIEKDIQ ENSBTAP00000008756/1-953 PSLNHSVGPK NSEKTTENGV SSRIDILRLL LQQLEVALET GKRFIEKDIQ bmy_05725T0/1-966 PSLNHSVGPE NSEKTTENGV SSRIDIFRLL LQQLEVALET GKRFIEKDIQ 751 800 ENSTTRP00000010237/1-971 XXXXXXXXXX XXXXXXXXXX XXXTSSFYLV SDIYELDING LXXXXXXXXX ENSP00000261745/1-972 YPFLGPVPTR MGGFFNSGCS QCQISSFYLV NDIYELDTSG LEDTMEIQER BACU003449/1-761 YPFLGPVPTR MAGFFNSGCS QCQTSSFYLV SDIYELDING LEDTMEIQER ENSBTAP00000008756/1-953 YPFLGPVPTR MAGFFNSGCS QCQTSSFYLV SDIYELDING LEDTVEIQER bmy_05725T0/1-966 YPFLGPVPTR MAGFFNSGCS QCQTSSFYLV SDIYELDING LEDTMEIQER 801 850 ENSTTRP00000010237/1-971 XXXXXXXXXX XXXXVFSKCK GDLLEVKDGN LKTHPTLLEN LVFLVEXXXX ENSP00000261745/1-972 IENSFKSLLD QLKDVFSKCK GDLLEVKDGN LKTHPTLLEN LVFFVETISV BACU003449/1-761 VENSLKSLLE QLKDVFSKCK GDLLEVKDGN LKTHPTLLEN LVFLVETISI ENSBTAP00000008756/1-953 VENSLKSLLE QLKDVFSKCK GDLLEVKDGN LKTHPTLLEN LVFLVETISI bmy_05725T0/1-966 VENSLKSLLE QLKDVFSKCK GDLLEVKDGN LKTHPTLLEN LVFLVETISI 851 900 ENSTTRP00000010237/1-971 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXPPVFTSF QDYVTGLQTL ENSP00000261745/1-972 ILWVSSYCES VLRPYKLNLQ KKKKKKKETS IIMPPVFTSF QDYVTGLQTL BACU003449/1-761 ILWVSSYCES VLRPYKLNLQ KKKKKKKETS IIMPPVFTSF QDYVTGLQTL ENSBTAP00000008756/1-953 ILWVSSYCES VLRPYKLNLQ KKKKKKKETS IIMPPVFTSF QDYVTGLQTL bmy_05725T0/1-966 ILWVSSYCES VLRPYKLNLQ KKKKKKKETS IVMPPVFTSF QDYVTGLQTL 901 950 ENSTTRP00000010237/1-971 ISNVVDHIKG LETHLIALKL EELILEDTSL SLEERKFSKT VQGKVQSSYL ENSP00000261745/1-972 ISNVVDHIKG LETHLIALKL EELILEDTSL SPEERKFSKT VQGKVQSSYL BACU003449/1-761 ISNVVDHIKG LEAHLIALKL EELILEDTSL SLVKR----- ---------- ENSBTAP00000008756/1-953 ISNVVDHIKG LETHLIALKL EELILEDTSL SLEERKFSKT VQGKVQSSYL bmy_05725T0/1-966 ISNVVDHIKG LEAHLIALKL EDLILEDTSL SLEERKFSKT VQGKVQSSYL 951 1000 ENSTTRP00000010237/1-971 HSLLEIGELL KKRLETTKKL KI ENSP00000261745/1-972 HSLLEMGELL KKRLETTKKL KI BACU003449/1-761 ---------- --------AA NI ENSBTAP00000008756/1-953 HSLLEIGELL KKRLETTKKL KI bmy_05725T0/1-966 HSLLEIGELL KKRLETTKKL KI