KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:36:12 2014 Check: 00 .. Name: bmy_17530T0/1-410 Len: 597 Check: 8682 Weight: 1.00 Name: ENSP00000194130/1-595 Len: 597 Check: 4435 Weight: 1.00 Name: ENSBTAP00000008767/1-597 Len: 597 Check: 3442 Weight: 1.00 Name: BACU006841/1-451 Len: 597 Check: 3144 Weight: 1.00 Name: ENSTTRP00000006030/1-550 Len: 597 Check: 4351 Weight: 1.00 // 1 50 bmy_17530T0/1-410 ---MERKPLR KRRLAG---- ---------R KEKEAECAYI LFVVAMFWVT ENSP00000194130/1-595 MKFFSYILVY RRFLFVVFTV LVLLPLPIVL HTKEAECAYT LFVVATFWLT ENSBTAP00000008767/1-597 MKFFSYILVY RRLLLIVFTL LILLPLPLIL RSKEAECAYT LFVIAIFWLT BACU006841/1-451 MKFFSYILVY RRFLLVVFTL LILLPLPLIL RTKEAECAYI LFVVAIFWLT ENSTTRP00000006030/1-550 MKFFSYILVY RRFLLVLFTL LILLPLPLIL HNKEAECAYI LFVVATFWLT 51 100 bmy_17530T0/1-410 EALPLSVTAL LPGLMFPMFG IIPSKK---- ---------- ---------E ENSP00000194130/1-595 EALPLSVTAL LPSLMLPMFG IMPSKKVASA YFKDFHLLLI GVICLATSIE ENSBTAP00000008767/1-597 EALPLSITAL LPGLMFPMFG IMTSKEVASA YFKDFHLLLI GVICLATSIE BACU006841/1-451 EALPLSVTAL LPGLMFPMFG IIPSKKVASA YFKDFHLLLI GVICLATSTE ENSTTRP00000006030/1-550 EALPLSVTAL LPALMLPMFG IMPSKKVASA YFKDFHLLLT GVICLATSIE 101 150 bmy_17530T0/1-410 RWEV------ ---------- ---------- ---------- ------LLPT ENSP00000194130/1-595 KWNLHKRIAL KMVMMVGVNP AWLTLGFMSS TAFLSMWLSN TSTAAMVMPI ENSBTAP00000008767/1-597 KWNLHKRIAL RMVMMVGVNP AWLSLGFMSS TAFLSMWLSN TSTAAMVMPI BACU006841/1-451 KWNLHKRIAL RMVTMVGVNP AWLTLGFMSS TAFLSMWLSN TSTAAMVMPI ENSTTRP00000006030/1-550 KWNLHKRIAL RMVMMVGVNP AWLTLGFMSS TAFLSMWLSN TSTTAMVMPI 151 200 bmy_17530T0/1-410 ---------- ---------- ---------- ---------- ---------- ENSP00000194130/1-595 AEAVVQQIIN AEAEVEATQM TYFNGSTNHG LEIDESVNGH EINERKEKTK ENSBTAP00000008767/1-597 VEAVAQQVIS AEAEVEATQM TYFSGSTNQA LEIDESINGQ EANERKEKTK BACU006841/1-451 VEAVAQQIIS AEAEVEATQM TYISGSTNYG LETDENVNGH ETSERKEKTK ENSTTRP00000006030/1-550 MEAVAQQIIS AEAEVEATQM TYISGSTNYG LETDENVNEH ETSERKEKTK 201 250 bmy_17530T0/1-410 ---------- --------DH QKGF------ ---------H LYAFCEHVS- ENSP00000194130/1-595 PVPGYNNDTG KISSKVELEK NSGM--RTKY RTKKGHVTRK LTCLCIAYSS ENSBTAP00000008767/1-597 PVPGYSNDAG KISSKMELEK NSGTNSGNKY RTKKDHMMCK LMCLCIAYSS BACU006841/1-451 PVPGYSNDAG KISSKMEIEK NSGT--GNKY RTKKDHMMCK LMCLCIAYSS ENSTTRP00000006030/1-550 PVPGYSNDAG KISSKMELEK NSGT--GNKY RTKKDHMMCK LMCLCVAYSS 251 300 bmy_17530T0/1-410 ---------- -----IFSHR ---RYPDCHC INFGSWFLMS FPAAIIILLL ENSP00000194130/1-595 TIGGLTTITG TSTNLIFAEY FNTRYPDCRC LNFGSWFTFS FPAALIILLL ENSBTAP00000008767/1-597 TIGGLTTITG TSTNLIFAEH FNMRYPDCQC INFGSWFIMS FPAAIVILLL BACU006841/1-451 TIGGLTTITG TSTNLIFAEH FNTRYPDCHC INFGSWFLMS FPAAIIILLL ENSTTRP00000006030/1-550 TIGGLTTITG TSANLIFAEH FNMRYPDCHC INFGSWFLMS FPAAIIILLL 301 350 bmy_17530T0/1-410 SWIWLHWLFL GFKLWEQCEV VLLLKQMXEM SPPSAGLEFS H----RYQEI ENSP00000194130/1-595 SWIWLQWLFL GFNFKEMFKC GKTKTVQQKA CAEVIKQEYQ KLGPIRYQEI ENSBTAP00000008767/1-597 SWIWLQWFFL GFNFKEMFQC GKPPTAKQKA CAAFIKQEYQ KLGPIRYQEI BACU006841/1-451 SWIWLQWLFL GFNFKEMARC GKTATAKQKA CAEVIKQEYQ KLGPIRYQEI ENSTTRP00000006030/1-550 SWIWLQWLFL GFNFKEMAQC GKTATAKQKA CAEVIKQEYQ KLGPIKYQEI 351 400 bmy_17530T0/1-410 VTLVLFIVMA LLWFSRDPGF VSGWSVLFSE YPGFATDSTV ALLVGLLFFL ENSP00000194130/1-595 VTLVLFIIMA LLWFSRDPGF VPGWSALFSE YPGFATDSTV ALLIGLLFFL ENSBTAP00000008767/1-597 VTLVLFIVMA LLWFSRDPGF VSGWSALFSE YPGFATDSTV ALLIGLLFFL BACU006841/1-451 VTLVLFIVMA LLWFSRDPGF MPGWSVLFSE YPGFATDSTV ALLVGLLFFL ENSTTRP00000006030/1-550 VTLVLFIVMA LLWFTRDPGF VSGWSVLFSE YPGFATDSTV ALLVGLLFFL 401 450 bmy_17530T0/1-410 IPAKRLTKTI PTGETVASDY SPLITWKEFQ SFMPWDIAIL VGGGFALADG ENSP00000194130/1-595 IPAKTLTKTT PTGEIVAFDY SPLITWKEFQ SFMPWDIAIL VGGGFALADG ENSBTAP00000008767/1-597 IPAKRLTKTT PTGETVAFDY SPLITWKEFQ SFMPWDIAIL VGGGFALADG BACU006841/1-451 IPAKRLTKTI PTGETVASDY SPLITWKEFQ SFMPWDIAIL VGGGFALADG ENSTTRP00000006030/1-550 IPAKRLTKTI PTGETVAFDY SPLITWKEFQ SFMPWDIAIL VGGGFALADG 451 500 bmy_17530T0/1-410 CEESGLSKWI GNKLSPLGSL PVWLIILISS LLVTSLTEVA SNPATITLLL ENSP00000194130/1-595 CEESGLSKWI GNKLSPLGSL PAWLIILISS LMVTSLTEVA SNPATITLFL ENSBTAP00000008767/1-597 CEESGLSKWI GNKLSPLGSL PVWLIILISS LLVTSLTEVA SNPATITLLL BACU006841/1-451 CER------- ---------- ---------- ---------- ---------- ENSTTRP00000006030/1-550 CEESGLSKWI GNKLSPLGSL PVWLIILISS LLVTSLTEVA SNPATITLLL 501 550 bmy_17530T0/1-410 PILSPLAEAI QVNPLYILLP STLCTSFAFL LPVANPPNAI VFSYGHLKVT ENSP00000194130/1-595 PILSPLAEAI HVNPLYILIP STLCTSFAFL LPVANPPNAI VFSYGHLKVI ENSBTAP00000008767/1-597 PILSPLAEAI HVNPLYILLP STLCTSFAFL LPVANPPNAI VFSYGHLKVM BACU006841/1-451 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006030/1-550 PILSPLAEAI QVNPLYILLP STLCNSFAFL LPVANPPNAI VFSYGHLKVT 551 600 bmy_17530T0/1-410 DMVKAGLGVN IVGVAVVMLG MFTWIVPMFD LHTYPSWAPA VSNETIP ENSP00000194130/1-595 DMVKAGLGVN IVGVAVVMLG ICTWIVPMFD LYTYPSWAPA MSNETMP ENSBTAP00000008767/1-597 DMVKAGLGVN IVGVAVVMLG MFTWIVPMFD LHTYPSWAPP ISNETTP BACU006841/1-451 ---------- ---------- ---------- ---------- ------- ENSTTRP00000006030/1-550 DM-------- ---------- ---------- ---------- -------