KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:36:13 2014 Check: 00 .. Name: ENSTTRP00000004213/1-623 Len: 919 Check: 496 Weight: 1.00 Name: bmy_13019T0/1-904 Len: 919 Check: 9884 Weight: 1.00 Name: ENSP00000358635/1-623 Len: 919 Check: 460 Weight: 1.00 Name: ENSBTAP00000008774/1-638 Len: 919 Check: 3265 Weight: 1.00 Name: BACU016911/1-525 Len: 919 Check: 6349 Weight: 1.00 // 1 50 ENSTTRP00000004213/1-623 ---------- ---------- ---------- ---------- ---------- bmy_13019T0/1-904 LLGIPHVSVI VVILGIKPGI RSSAGTNENN LAYEVFKHFE EYSSNFLFRE ENSP00000358635/1-623 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008774/1-638 ---------- ---------- ---------- ---------- ---------- BACU016911/1-525 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000004213/1-623 ---------- ---------- ---------- ---------- ---------- bmy_13019T0/1-904 PHPKAGAAPR STGASRFPLK SSRGFLVRAP SAPPSAQGSR GKEATRARGP ENSP00000358635/1-623 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008774/1-638 ---------- ---------- ---------- ---------- ---------- BACU016911/1-525 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000004213/1-623 ---------- ---------- ---------- ---------- ---------- bmy_13019T0/1-904 GVPTVRPGRP SLPGGTPALE SRRPGGPKVR GLRAAPLPRR PIVCLAPPRG ENSP00000358635/1-623 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008774/1-638 ---------- ---------- ---------- ---------- ---------- BACU016911/1-525 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000004213/1-623 ---------- ---------- ---------- ---------- ---------- bmy_13019T0/1-904 TRAPAASRAR RARGGGGVDT AWNGYAAAAS GAGAGRARTG CCYRSLSGRR ENSP00000358635/1-623 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008774/1-638 ---------- ---------- ---------- ---------- ---------- BACU016911/1-525 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000004213/1-623 ---------- ---------- ---------- ---------- ---------- bmy_13019T0/1-904 EKRALRGFTF EREKPSFACS THTSFAVRAQ LHVARWLVLV LGVLAGESGV ENSP00000358635/1-623 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008774/1-638 ---------- ---------- ---------- ---------- ---------- BACU016911/1-525 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000004213/1-623 ---------- ---------- ---------- -MATEHVNGN GTEEPMDTTS bmy_13019T0/1-904 VLRKNVVDPS FCAPRSECGL SGDSDFQISG NMATEHVNGN GTEEPMDTTS ENSP00000358635/1-623 ---------- ---------- ---------- -MATEHVNGN GTEEPMDTTS ENSBTAP00000008774/1-638 ---------- ------DRIP PPQPNGEISG NMATEHVNGN GTEEPMDTTS BACU016911/1-525 ---------- ---------- ---------- ---------- ---------- 301 350 ENSTTRP00000004213/1-623 AVIHSENFQT LLDAGLPQKV AEKLDEIYVA GLVAHSDLDE RAIEALKEFN bmy_13019T0/1-904 AVIHSENFQT LLDAGLPQKV AEKLDEIYVA GLVAHSDLDE RAIEALKEFN ENSP00000358635/1-623 AVIHSENFQT LLDAGLPQKV AEKLDEIYVA GLVAHSDLDE RAIEALKEFN ENSBTAP00000008774/1-638 AVIHSENFQT LLDAGLPQKV AEKLDEIYVA GLVAHSDLDE RAIEALKEFN BACU016911/1-525 ---------- ---------- ---------- ---------- ---------- 351 400 ENSTTRP00000004213/1-623 EDGALAVLQQ FKDSDLSHVQ NKSAFLCGVM KTYRQREKQG TKVADSSKGP bmy_13019T0/1-904 EDGALAVLQQ FKDSDLSHVQ NKSAFLCGVM KTYRQREKQG TKVADSSKGP ENSP00000358635/1-623 EDGALAVLQQ FKDSDLSHVQ NKSAFLCGVM KTYRQREKQG TKVADSSKGP ENSBTAP00000008774/1-638 EDGALAVLQQ FKDSDLSHVQ NKSAFLCGVM KTYRQREKQG TKVADSSKGP BACU016911/1-525 ---------- ---------- ---------M KTYRQREKQG TKVADSSKGP 401 450 ENSTTRP00000004213/1-623 DEAKIKXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_13019T0/1-904 DEAKIKALLE RTGYTLDVTT GQRKYGGPPP DSVYSGQQPS VGTEIFVGKI ENSP00000358635/1-623 DEAKIKALLE RTGYTLDVTT GQRKYGGPPP DSVYSGQQPS VGTEIFVGKI ENSBTAP00000008774/1-638 DEAKIKALLE RTGYTLDVTT GQRKYGGPPP DSVYSGQQPS VGTEIFVGKI BACU016911/1-525 DEAKIKALLE RTGYTLDVTT GQRKYGGPPP DSVYSGQQPS VGTEIFVGKI 451 500 ENSTTRP00000004213/1-623 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXEA bmy_13019T0/1-904 PRDLFEDELV PLFEKAGPIW DLRLMMDPLT GLNRGYAFVT FCTKEAAQEA ENSP00000358635/1-623 PRDLFEDELV PLFEKAGPIW DLRLMMDPLT GLNRGYAFVT FCTKEAAQEA ENSBTAP00000008774/1-638 PRDLFEDELV PLFEKAGPIW DLRLMMDPLT GLNRGYAFVT FCTKEAAQEA BACU016911/1-525 PRDLFEDELV PLFEKAGPIW DLRLMMDPLT GLNRGYAFVT FCTKEAAQEA 501 550 ENSTTRP00000004213/1-623 VKLYNNHEIR SGKHIGVCIS VANNRLFVGS IPKSKTKEQI LEEFSKVTEG bmy_13019T0/1-904 VKLYNNHEIR SGKHIGVCIS VANNRLFVGS IPK------- --------KG ENSP00000358635/1-623 VKLYNNHEIR SGKHIGVCIS VANNRLFVGS IPKSKTKEQI LEEFSKVTEG ENSBTAP00000008774/1-638 VKLYNNHEIR SGKHIGVCIS VANNRLFVGS IPKSKTKEQI LEEFSKVTEG BACU016911/1-525 VKLYNNHEIR SGKHIGVCIS VANNRLFVGS IPKSKTKEQI LEEFSKVTEG 551 600 ENSTTRP00000004213/1-623 LTDVILYHQP DDKKKNRGFC FLEYEDHKTA AQARRRLMSG KVKVWGNVGT bmy_13019T0/1-904 LTDVILYHQP DDKKKNRGFC FLEYEDHKTA AQARRRLMSG KVKVWGNVGT ENSP00000358635/1-623 LTDVILYHQP DDKKKNRGFC FLEYEDHKTA AQARRRLMSG KVKVWGNVGT ENSBTAP00000008774/1-638 LTDVILYHQP DDKKKNRGFC FLEYEDHKTA AQARRRLMSG KVKVWGNVGT BACU016911/1-525 LTDVILYHQP DDKKKNRGFC FLEYEDHKTA AQARRRLMSG KVKVWGNVGT 601 650 ENSTTRP00000004213/1-623 VEWADPIEDP DPEVMAKVKV LFVRNLANTV TEEILEKAFS QFGKLERVKK bmy_13019T0/1-904 VEWADPIEDP DPEVMAKVKV LFVRNLANTV TEEILEKAFS QFGKLERVKK ENSP00000358635/1-623 VEWADPIEDP DPEVMAKVKV LFVRNLANTV TEEILEKAFS QFGKLERVKK ENSBTAP00000008774/1-638 VEWADPIEDP DPEVMAKVKV LFVRNLANTV TEEILEKAFS QFGKLERVKK BACU016911/1-525 VEWADPIEDP DPEVMAKVKV LFVRNLANTV TEEILEKAFS QFGKLERVKK 651 700 ENSTTRP00000004213/1-623 LKDYAFIHFD ERDGAVKAME EMNGKDLEGE NIEIVFAKPP DQKRKERKAQ bmy_13019T0/1-904 LKDYAFIHFD ERDGAVKAME EMNGKDLEGE NIEIVFAKPP DQKRKERKAQ ENSP00000358635/1-623 LKDYAFIHFD ERDGAVKAME EMNGKDLEGE NIEIVFAKPP DQKRKERKAQ ENSBTAP00000008774/1-638 LKDYAFIHFD ERDGAVKAME EMNGKDLEGE NIEIVFAKPP DQKRKERKAQ BACU016911/1-525 LKDYAFIHFD ERDGAVKAME EMNGKDLEGE NIEIVFAKPP DQKRKERKAQ 701 750 ENSTTRP00000004213/1-623 RQAAKNQMYD DYYYYGPPHM PPPTRGRGRG GRGGYGYPPD YYGYEDYYDY bmy_13019T0/1-904 RQAAKNQMYD DYYYYGPPHM PPPTRGRGRG GRGGYGYPPD YYGYEDYYDY ENSP00000358635/1-623 RQAAKNQMYD DYYYYGPPHM PPPTRGRGRG GRGGYGYPPD YYGYEDYYDY ENSBTAP00000008774/1-638 RQAAKNQMYD DYYYYGPPHM PPPTRGRGRG GRGGYGYPPD YYGYEDYYDY BACU016911/1-525 RQAAKNQMYD DYYYYGPPHM PPPTRGRGRG GRGGYGYPPD YYGYEDYYDY 751 800 ENSTTRP00000004213/1-623 YGYDYHNYRG GYEDPYYGYE DFQVGARGRG GRGARGAAPS RGRGAAPPRG bmy_13019T0/1-904 YGYDYHNYRG GYEDPYYGYE DFQVGARGRG GRGARGAAPS RGRGAAPPRG ENSP00000358635/1-623 YGYDYHNYRG GYEDPYYGYE DFQVGARGRG GRGARGAAPS RGRGAAPPRG ENSBTAP00000008774/1-638 YGYDYHNYRG GYEDPYYGYE DFQVGARGRG GRGARGAAPS RGRGAAPPRG BACU016911/1-525 YGYDYHNYRG GYEDPYYGYE DFQVGARGRG GRGARGAAPS RGRGAAPPRG 801 850 ENSTTRP00000004213/1-623 RAGYSQRGGP GSARGVRGAR GGAQQQRGRG VRGARGGRGG NVGGKRKADG bmy_13019T0/1-904 RAGYSQRGGP GSARGVRGAR GGAQQQRGRG VRGARGGRGG NVGGKRKADG ENSP00000358635/1-623 RAGYSQRGGP GSARGVRGAR GGAQQQRGRG VRGARGGRGG NVGGKRKADG ENSBTAP00000008774/1-638 RAGYSQRGGP GSARGVRGAR GGAQQQRGRG VRGARGGRGG NVGGKRKADG BACU016911/1-525 RAGYSQRGGP GSARGVRGAR GGAQQQRGRG VRGARGGRGG NVGGKRKADG 851 900 ENSTTRP00000004213/1-623 YNQPDSKRRQ TNNQNWGSQP IAQQPLQGGD HSGNYGYKSE NQEFYQDTFG bmy_13019T0/1-904 YNQPDSKRRQ TNNQNWGSQP IAQQPLQGGD HSGNYGYKSE NQEFYQDTFG ENSP00000358635/1-623 YNQPDSKRRQ TNNQNWGSQP IAQQPLQGGD HSGNYGYKSE NQEFYQDTFG ENSBTAP00000008774/1-638 YNQPDSKRRQ TNNQNWGSQP IAQQPLQGGD HSGNYGYKSE NQEFYQDTFG BACU016911/1-525 YNQPDSKRRQ TNNQNWGSQP IAQQPLQGGD HSGNYGYKSE NQEFYQDTFG 901 950 ENSTTRP00000004213/1-623 QQWK------ --------- bmy_13019T0/1-904 QQWNREKGSR PVLTCYNED ENSP00000358635/1-623 QQWK------ --------- ENSBTAP00000008774/1-638 QQWK------ --------- BACU016911/1-525 QQWK------ ---------