KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:36:13 2014 Check: 00 .. Name: bmy_01234T0/1-393 Len: 552 Check: 1914 Weight: 1.00 Name: BACU015120/1-199 Len: 552 Check: 647 Weight: 1.00 Name: ENSBTAP00000008789/1-413 Len: 552 Check: 2316 Weight: 1.00 Name: ENSP00000295600/1-520 Len: 552 Check: 6813 Weight: 1.00 Name: ENSTTRP00000006690/1-526 Len: 552 Check: 162 Weight: 1.00 // 1 50 bmy_01234T0/1-393 ---------- ---------- ---------- ---------- ---------- BACU015120/1-199 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008789/1-413 ---------- ---------- ---------- ---------- ---------- ENSP00000295600/1-520 MQSESGIVPD FEVGEEFHEE PKTYYELKSQ PLKSSSSAEH PGASKPPISS ENSTTRP00000006690/1-526 MQSESGIVPD FEVGEEFHEE PKTYYELKSQ PLKSSSSEEH PGASKPPISS 51 100 bmy_01234T0/1-393 ---------- ---------- ---------- ---------- ---------- BACU015120/1-199 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008789/1-413 ---------- ---------- ---------- ---------- ---------- ENSP00000295600/1-520 SSMTSRILLR QQLMREQMQE QERREQQQKL QAAQFMQQRV PVSQTPAINV ENSTTRP00000006690/1-526 SSMTSRILLR QQLMREQMQE QERREQQQKL QAAQFMQQRV PVSQTPAINV 101 150 bmy_01234T0/1-393 ---------M QGEKERWKRE NYTLSESLVH LVAAPSASYE YVIEKSFAN- BACU015120/1-199 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008789/1-413 -------ILE MLEYNHYQVQ THLENPTKYH IQQAQRQQVK QYLSTTLANK ENSP00000295600/1-520 SVPTTLPSAT QVPMEVLKVQ THLENPTKYH IQQAQRQQVK QYLSTTLANK ENSTTRP00000006690/1-526 SVPTTLPSAT QVPMEVLKVQ THLENPTKYH IQQAQRQQVK QYLSTTLANK 151 200 bmy_01234T0/1-393 ---------- ---------- -------PDH RLILLVF--- --LQGFYKFE BACU015120/1-199 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008789/1-413 HANQVLSLPC PNQPGDHVMP PVPGSSAPNS PMAMLTLNSN CEKEGFYKFE ENSP00000295600/1-520 HANQVLSLPC PNQPGDHVMP PVPGSSAPNS PMAMLTLNSN CEKEGFYKFE ENSTTRP00000006690/1-526 HANQVLSLPC PNQPGDHVMP PVPGSSAPNS PMAMLTLNSN CEKEGFYKFE 201 250 bmy_01234T0/1-393 EQNRAESECP SMNTHSRASC MQMDDVIDDI ISLESSYNEE ILGLMDPALQ BACU015120/1-199 ---------- ---------- ---------- ---------- ----MEP--- ENSBTAP00000008789/1-413 EQNRAESECP SMNTHSRASC MQMDDVIDDI ISLESSYNEE ILGLMDPALQ ENSP00000295600/1-520 EQNRAESECP GMNTHSRASC MQMDDVIDDI ISLESSYNEE ILGLMDPALQ ENSTTRP00000006690/1-526 EQNRAESECP SMNTHLRASC MQMDDVIDDI ISLESSYNEE ILGLMDPALQ 251 300 bmy_01234T0/1-393 MANTVSREKE IRERGREGRR KVDFDEKRDL LPVSGNLIDL YGNQGLPPPG BACU015120/1-199 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008789/1-413 MANT------ ---------- ---------- LPVSGNLIDL YGNQGLPPPG ENSP00000295600/1-520 MANT------ ---------- ---------- LPVSGNLIDL YGNQGLPPPG ENSTTRP00000006690/1-526 MANT------ ---------- ---------- LPVSGNLIDL YGNQGLPPPG 301 350 bmy_01234T0/1-393 LTISNSCPAN LPNIKRELSA HIFPTESEAR ALAKERQKKD NHNLIERRRR BACU015120/1-199 ---------- -PVLKQSVSF H--------- ---------- ---------- ENSBTAP00000008789/1-413 LTISNSCPAN LPNIKREL-- ----TESEAR ALAKERQKKD NHNLIERRRR ENSP00000295600/1-520 LTISNSCPAN LPNIKREL-- ----TESEAR ALAKERQKKD NHNLIERRRR ENSTTRP00000006690/1-526 LTISNSCPAN LPNIKRELSA HIFPTESEAR ALAKERQKKD NHNLIERRRR 351 400 bmy_01234T0/1-393 FNINDRIKEL GTLIPKSNDP DMRWNKGTIL KASVDYIRKL QREQQRAKEL BACU015120/1-199 ---------- --FLPR---- DMRWNKGTIL KASVDYIRKL QREQQRAKEL ENSBTAP00000008789/1-413 FNINDRIKEL GTLIPKSNDP DMRWNKGTIL KASVDYIRKL QREQQRAKEL ENSP00000295600/1-520 FNINDRIKEL GTLIPKSNDP DMRWNKGTIL KASVDYIRKL QREQQRAKEL ENSTTRP00000006690/1-526 FNINDRIKEL GTLIPKSNDP DMRWNKGTIL KASVDYIRKL QREQQRAKEL 401 450 bmy_01234T0/1-393 ENRQKKLEHA NRHLLLRIQE CTYQ------ ---------- -HLVSRIIKQ BACU015120/1-199 ENRQKKLEHA NRHLLLRIQE LEMQARAHGL SLIPSTGLCS PDLVSRIIKQ ENSBTAP00000008789/1-413 ENRQKKLEHA NRHLLLRIQE LEMQARAHGL SLIPSTGLCS PDLVSRIIKQ ENSP00000295600/1-520 ENRQKKLEHA NRHLLLRIQE LEMQARAHGL SLIPSTGLCS PDLVNRIIKQ ENSTTRP00000006690/1-526 ENRQKKLEHA NRHLLLRIQE LEMQARAHGL SLIPSTGLCS PDLVSRIIKQ 451 500 bmy_01234T0/1-393 EPALENCSQD LLQQHADLTC TTTLDLTDGT ITFNNNFGAG TESSQAYNVP BACU015120/1-199 EPALENCSQD LLQQHADLTC TTTLDLTDGT ITFNNNFGAG TESSQAYSVP ENSBTAP00000008789/1-413 EPALENCNQD LLQHHADLTC TTTLDLTDGT ITFNNSLGAG TESSQAYSVP ENSP00000295600/1-520 EPVLENCSQD LLQHHADLTC TTTLDLTDGT ITFNNNLGTG TEANQAYSVP ENSTTRP00000006690/1-526 EPALENCSQD LLQQHADLTC TTTLDLTDGT ITFNNNFGAG TESSQAYSVP 501 550 bmy_01234T0/1-393 TKMGSKLEDI LMDDTLSPVG ITDPLLSSVS PGASKTSSRR SSVSMEETEH BACU015120/1-199 TKMGSKLEDI LMDDTLSPVG ITDPLLSSVS PGASKTSSRR SSVSMEETEH ENSBTAP00000008789/1-413 AKMGSKLEDI LMDDTLSPVG ITDPLLSSVS PGASKTSSRR SSMSMEETEH ENSP00000295600/1-520 TKMGSKLEDI LMDDTLSPVG VTDPLLSSVS PGASKTSSRR SSMSMEETEH ENSTTRP00000006690/1-526 TKMGSKLEDI LMDDTLSPVG ITDPLLSSVS PGASKTSSRR SSMSMEETEH 551 600 bmy_01234T0/1-393 AC BACU015120/1-199 AC ENSBTAP00000008789/1-413 AC ENSP00000295600/1-520 TC ENSTTRP00000006690/1-526 AC