KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:36:17 2014 Check: 00 .. Name: ENSP00000355840/1-623 Len: 636 Check: 9081 Weight: 1.00 Name: ENSBTAP00000008811/1-629 Len: 636 Check: 4847 Weight: 1.00 Name: bmy_21934T0/1-619 Len: 636 Check: 9810 Weight: 1.00 Name: BACU012906/1-626 Len: 636 Check: 7841 Weight: 1.00 // 1 50 ENSP00000355840/1-623 MAGFSHFSQP PYRDLWEPPR PGGERESTQR LGGQRSGADS TACSRAGTPG ENSBTAP00000008811/1-629 MEDFGRFSPR PHSAVWEPPP PSEESASLAQ LDGSGPRAEP GLCSWAQTPG bmy_21934T0/1-619 MEGFGRFSPW PHSDLWEAPP PRKERASSAR LGGSGPQSEQ GLCSRPGTPR BACU012906/1-626 MEGFGRFSPW PHSDLWEAPP PRKERASSAR LGGSGPQSEQ GLCSRPGTPR 51 100 ENSP00000355840/1-623 AESEAGACWL HPHCSFTPRP RRRGCSDSLR GSRSLSDVAR RPLERSRKHR ENSBTAP00000008811/1-629 EESEATAPWP HLLCSATPRP SRRPYSDSPQ ESRSLTDVAR RFLDRARKPR bmy_21934T0/1-619 ERSEAAAPWP HLRCSPTPRP RRRRYPDFPP ESRSLTDVAR RPPDHARKHR BACU012906/1-626 ERSEASAPWP HLRCSPTPRP RRRRYPDFPP ESRSLTDVAR RPPDHARKHR 101 150 ENSP00000355840/1-623 PRSRRLEDAW GETGTKPR-- ------PAWQ PQTQLPPQRP QPCPHYPLAQ ENSBTAP00000008811/1-629 PRSRRLEDAW GEARTKPQEQ GGSGHSPAWQ LEPE-----P QHSQHYPPAR bmy_21934T0/1-619 PRSRRLEDAW GEAGTKPLEQ RRSPPSPAWQ QQPQLPPQQS QPCQHYPPAR BACU012906/1-626 PRSRRLEDAW GEAGTKPLEQ GGRPPSPAWQ QQPQLPPQQP QPCQHYPPAR 151 200 ENSP00000355840/1-623 GDSPPPCPGG AGTPLSGTFR VEKAQGGDQW AVPLGRHLGR WSPSSVPSER ENSBTAP00000008811/1-629 GDSPPPYSQG AHTPANRAFE EEKAQSGDQW AVPVCRGLRP WSLSSVHTEK bmy_21934T0/1-619 GDSPPPYPQG AYTPPSGTFG VEKVQSGDQW AVPACRGLGR WSLSSVHTKK BACU012906/1-626 GDSPPPYPQG AYTPPSGTFG VEKVQSGDQW AVPACRGLGR WSLSSVHTKK 201 250 ENSP00000355840/1-623 SSVPSQKFKR HSACVCAQKR DSSDQVESLA SRDSQPLASS KEMRSPHTQV ENSBTAP00000008811/1-629 SSVSSREFGT QSGCMHIQKR HSNDPVESLT SQLSQSLVSS KEMQKQHTQV bmy_21934T0/1-619 CSVPSREFGT QSGCVYLQKR YRNDPVESLA SQYSQPSLSS KAMQNQHTQI BACU012906/1-626 CSVPSREFGT QSGCVYLQKR YRNDPVESLA SQYSQPSLSS KAMQNQHTQI 251 300 ENSP00000355840/1-623 LKSKLEEVVV SSQDQQIVAL VLTRLKKAQR IRELQQQAAK AWEELKRSDQ ENSBTAP00000008811/1-629 LKNKLEEAVV SSRDQKIVAL VLSRLKKAQR MRELQQQAAL AWEELKRSDQ bmy_21934T0/1-619 LKNKLEEAVM SSRDRKIVAL VLTWLKKAQR MRELQQQAAL AWEELKRSDQ BACU012906/1-626 LKNKLEEAVM SSRDRKIVAL VLTWLKKAQR MRELQQQAAL AWEELKRSDQ 301 350 ENSP00000355840/1-623 KVQMTLERER RLLLRQSQEQ W-QEKEQRKT LQSPEQRGLR RDSQRKNVPP ENSBTAP00000008811/1-629 KVQLTLERER KLLLQQSQEQ WQQDKEQRKA RLNRELRVRR RDRRATNMIQ bmy_21934T0/1-619 KVQLTLETER KLLLQQSQEP WQQEKEQ--- ------RVRR RDRQATNTIR BACU012906/1-626 KVQLTLETER KLLLQQSQEQ WQQEKEQ--- ------RVRR RDRQATNTSR 351 400 ENSP00000355840/1-623 GESR-WKEQP EDQESPRQEK LEKARAQAEH R--KQCQVRR LREQEKMLRN ENSBTAP00000008811/1-629 QDSSGWKAPL EDQEKQRQEK LEGAPSEPET EPEKQCQVQR LP--ERMLRD bmy_21934T0/1-619 QERR-WKAQL EDQENQRQEK LEGAPSETEA KRGKEYQVQR LQEHEKMMQD BACU012906/1-626 QERR-WKAQL GDQENQRQEK LEGAPSETEA KRGTQYQVQR LQEHERMMQD 401 450 ENSP00000355840/1-623 LREQHSLQLQ RRLVEACRKR HLHAVEGQKK VQDTNLSSLI NYQARKVLMD ENSBTAP00000008811/1-629 LQARNSLQLQ KRLAQACLKK HVHPTKGQKK IQETSLSSLV NYQARKVLMD bmy_21934T0/1-619 LREQSSLQLQ KRLKQACLKR HVHTTEGQKK IQETSLSSLV NYQARKVLMD BACU012906/1-626 LREQNSLQLQ KRLKQVCLKR HVHTTEGQKK IQETRLSSLV NYQARKVLRD 451 500 ENSP00000355840/1-623 CQAKAEELLR QLSLEQSFQR SQEIHQGLRK ERQRELREKA QKEEEQLQQA ENSBTAP00000008811/1-629 CQAKAEELLR KLSLEQSSQW SQERPEGHTK EPDRELKDKV QKEEERFQQV bmy_21934T0/1-619 CQAKAEELLR KLSLEQSSQW SQEIPQGLIK EHHREPKEK- ------CQQV BACU012906/1-626 CQAKAEELLR KLSLEQSSQW SQEIPQGLIK EHHREPKEKV KKEEEQCQQV 501 550 ENSP00000355840/1-623 RWRAGESEEQ RKMRKRILVE LADEKIRQAR SHVHKTTRDK VQHLRELNHL ENSBTAP00000008811/1-629 KRWAEESQKQ RKEHKSLLEE LADQKTLQTQ SQVHKNVRDK AHHIRELNIL bmy_21934T0/1-619 KGCAEESGEQ RKEHERLSLE LADQKILQTR SNVHRNISDK VQQIRELNVL BACU012906/1-626 KGCAEESGEQ RKGHERLPVE LADQKILQTR SNVHRNISDK VQQIRELNIL 551 600 ENSP00000355840/1-623 REKNHHILKL KAEKEEKCHI EGIKEAIKKK EQRVQHISQG KDPNFQEFQK ENSBTAP00000008811/1-629 REKNHHILKL KAEKEERCHI EGIKEAIRRQ EQRMEQILRE KDATFEEFQK bmy_21934T0/1-619 REKNHHILKL KAEKEEKCHI ERIKEAIRKK ERKMEQISRE KDATFGESQK BACU012906/1-626 REKNHHILKL KAEKEEKCHI ERIKEAIRKK ERKMEQISRE KDAPFGEFQK 601 650 ENSP00000355840/1-623 LPQASRREE- RAPPNSSLDQ MVLEAQLRAC QQNRGY ENSBTAP00000008811/1-629 ISRTSGTDDV RTLANNFFDR MAREAQVPAG QQRGGY bmy_21934T0/1-619 ISRASRTDSV RKFANNFFDP IGREAQVRAG QQRGGH BACU012906/1-626 ISRASRADNV RKFANNFFDP IGREAQVRAG QQRGGH