KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:36:21 2014 Check: 00 .. Name: ENSP00000358413/1-413 Len: 424 Check: 2111 Weight: 1.00 Name: bmy_18293T0/1-406 Len: 424 Check: 1663 Weight: 1.00 Name: ENSBTAP00000008828/1-413 Len: 424 Check: 2631 Weight: 1.00 Name: BACU004654/1-210 Len: 424 Check: 2859 Weight: 1.00 Name: ENSTTRP00000016227/1-400 Len: 424 Check: 1248 Weight: 1.00 // 1 50 ENSP00000358413/1-413 MGTFCSVIKF ENLQELKRLC HWGPIIALGV IAICSTMAMI DSVLWYWPLH bmy_18293T0/1-406 MGTFCSVIKF ENLQEVKRLC HWGPIIALGV IAICSTMAMI DSVLWYWPLH ENSBTAP00000008828/1-413 MGTFCSVVKF ENLQELKRLC HWGPIIALGV IAICSAMAMI DSVLWYWPLH BACU004654/1-210 MGTFCSVIKF ENLQEVKRLC HWGPIIALGV IAICSTMAMI DSVLWYWPLH ENSTTRP00000016227/1-400 MGTFCSVIKF ENLQEVKRLC HWGPIIALGV IAICSTMAMI DSVLWYWPLH 51 100 ENSP00000358413/1-413 TTGGSVNFIM LINWTVMILY NYFNAMFVGP GFVPLGWKP- ---------- bmy_18293T0/1-406 TTGGSMXFIM LINWTVMILY NYFNAMFVGP GFVPLGWKPR FMFCFYFAAK ENSBTAP00000008828/1-413 TTGGSVNFIM LINWTVMILY NYFNAMFVGP GFVPLGWKP- ---------- BACU004654/1-210 TTGGSMNFIM LINWTVMILY NYFNAMFVGP GFVPLGWKP- ---------- ENSTTRP00000016227/1-400 TTGGSMNFIM LINWTVMILY NYFNAMFVGP GFVPLGWKP- ---------- 101 150 ENSP00000358413/1-413 EISQDTMYLQ YCKVCQAYKA PRSHHCRKCN RCVMKMDHHC PWINNCCGYQ bmy_18293T0/1-406 ENSQDSMYLQ YCKVCQAYKA PRSHHCRKCN RCVMKMDHHC PWINNCCGYQ ENSBTAP00000008828/1-413 ENSQDSVYLQ YCKVCQAYKA PRSHHCRKCN RCVMKMDHHC PWINNCCGYQ BACU004654/1-210 ENSQDSMYLQ YCKVCQAYKA PRSHHCRKCN RCVMKMDHHC PWINNCCGYQ ENSTTRP00000016227/1-400 ENSQDSMYLQ YCKVCQAYKA PRSHHCRKCN RCVMKMDHHC PWINNCCGYQ 151 200 ENSP00000358413/1-413 NHASFTLFLL LAPLGCIHAA FIFVMTMYTQ LYHRLSFGWN TVKIDMSAAR bmy_18293T0/1-406 NHASFTLFLL LAPLGCIHAA FIFVMTMYTQ LYNRLSFGWN TVKIDMSAAR ENSBTAP00000008828/1-413 NHASFTLFLL LAPLGCIHAA FIFVMTMYTQ LYNRLSFGWN TVKIDMSAAR BACU004654/1-210 NHASFTLFLL LAPLGCIHAA FIFVMTMYTQ LYNRLSFGWN TVKIDMSAAR ENSTTRP00000016227/1-400 NHASFTLFLL LAPLGCIHAA FIFVMTMYTQ LYNRLSFGWN TVKIDMSAAR 201 250 ENSP00000358413/1-413 RDPLPIVPFG LAAFATTLFA LGLALGTTIA VGMLFFIQMK IILRNKTSIE bmy_18293T0/1-406 RDPLPIIPFG LAAFAATLFA LGLALGTTIA VGMLFFIQ-- ---------- ENSBTAP00000008828/1-413 RDPLPIIPFG LAAFAATLFA LGLALGTTIA VGMLFFIQMK IILRNKTSIE BACU004654/1-210 RDPLPXXX-- ---------- ---------- ---------- ---------- ENSTTRP00000016227/1-400 RDPLPIMPFG LAAFAATLFA LGLALGTTIA VGMLFFIQMK IILRNKTSIE 251 300 ENSP00000358413/1-413 SWIEEKAKDR IQYYQLDEVF VFPYDMGSRW RNFKQVFTWS GVPEGDGLEW bmy_18293T0/1-406 ------AKDR IQYYQLDEVF VFPYDMGSRW KNFKQVFTWS GVPKGDGLDW ENSBTAP00000008828/1-413 SWIEEKAKDR IQYYQLDEVF VFPYDMGSRW KNFKQVFTWS GVPEGDGLDW BACU004654/1-210 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016227/1-400 SWIEEKXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 301 350 ENSP00000358413/1-413 PVREGCHQYS LTIEQLKQKA DKRVRSVRYK VIEDYSGACC PLNKGIKTFF bmy_18293T0/1-406 PIREGCHQYS LTIEQLKQKA DKRVRSVQYX VIEDYSGTCC PLNRGIKTFF ENSBTAP00000008828/1-413 PIREGCHQYS LTIEQLKQKA DKRVRSVRYK VIEDYSGTCC PLNRGIKTFF BACU004654/1-210 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016227/1-400 XXXXXXXXXX XXIEQLKQKA DKRVRSVQYK VIEDYSGTCC PLNRGIKTFF 351 400 ENSP00000358413/1-413 TSPCTEEPRI QLQKGEFILA TRGLRYWLYG DKILDDSFIE GVSRIRGWFP bmy_18293T0/1-406 TSPCTEEPRI RLQKGEFILA TRGLRYWLYG DKILDDSIKE GVSRIRGWFP ENSBTAP00000008828/1-413 TSPCTEEPRI RLQKGEFILA TRGLRYWLYG DKILDDSVLE GVSRIRGWFP BACU004654/1-210 ---XXXXXXF RL-------- ---------- ---------- --------FP ENSTTRP00000016227/1-400 TSPCTEEPRI RLQKGEFILA TRGLRYWLYG DKILDDSIKE DVSRIRGWFP 401 450 ENSP00000358413/1-413 RKCVEKCPCD AETDQAPEGE KKNR bmy_18293T0/1-406 RNCVEKCPCD AETDQAPEGE KKNR ENSBTAP00000008828/1-413 RNCVEKCPCD AETDQAPEGE KKNR BACU004654/1-210 LD-------- ---------- ---- ENSTTRP00000016227/1-400 RNCVEKCPCD A--------- ----